RNA–Protein interactions for RNA: ENST00000372899.5

UBR2-201, Transcript of ubiquitin protein ligase E3 component n-recognin 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBR2, Length 7,857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR2-201ENST00000372899 KRTAP3-2Q9BYR7 98 aa5.98□□□□□ -1.45
UBR2-201ENST00000372899 ZNF469Q96JG9 3925 aaPredicted RBP5.97□□□□□ -1.45
UBR2-201ENST00000372899 ANK3Q12955 4377 aaKnown RBP5.95□□□□□ -1.46
UBR2-201ENST00000372899 SPRR2FQ96RM1 72 aa5.86□□□□□ -1.47
UBR2-201ENST00000372899 AKAP9Q99996 3911 aa5.8□□□□□ -1.48
UBR2-201ENST00000372899 HUWE1Q7Z6Z7 4374 aaKnown RBP5.78□□□□□ -1.48
UBR2-201ENST00000372899 DNAH1Q9P2D7 4330 aa5.72□□□□□ -1.49
UBR2-201ENST00000372899 KRTAP10-4P60372 401 aaPredicted RBP5.71□□□□□ -1.5
UBR2-201ENST00000372899 CSMD3Q7Z407 3707 aa5.71□□□□□ -1.5
UBR2-201ENST00000372899 SPRR2EP22531 72 aa5.64□□□□□ -1.51
UBR2-201ENST00000372899 SPRR2BP35325 72 aa5.64□□□□□ -1.51
UBR2-201ENST00000372899 SPRR2AP35326 72 aa5.64□□□□□ -1.51
UBR2-201ENST00000372899 MT1HP80294 61 aa5.64□□□□□ -1.51
UBR2-201ENST00000372899 KRTAP19-5Q3LI72 72 aa5.54□□□□□ -1.52
UBR2-201ENST00000372899 LCE3CQ5T5A8 94 aa5.48□□□□□ -1.53
UBR2-201ENST00000372899 SPRR2DP22532 72 aa5.47□□□□□ -1.53
UBR2-201ENST00000372899 MT2AP02795 61 aa5.44□□□□□ -1.54
UBR2-201ENST00000372899 DNAH7Q8WXX0 4024 aa5.44□□□□□ -1.54
UBR2-201ENST00000372899 SPRR2GQ9BYE4 73 aa5.44□□□□□ -1.54
UBR2-201ENST00000372899 CMYA5Q8N3K9 4069 aa5.44□□□□□ -1.54
UBR2-201ENST00000372899 DNAH2Q9P225 4427 aa5.42□□□□□ -1.54
UBR2-201ENST00000372899 DNAH3Q8TD57 4116 aa5.4□□□□□ -1.55
UBR2-201ENST00000372899 LCE2BO14633 110 aa5.39□□□□□ -1.55
UBR2-201ENST00000372899 KRTAP12-4P60329 112 aa5.38□□□□□ -1.55
UBR2-201ENST00000372899 LCE3BQ5TA77 95 aa5.36□□□□□ -1.55
UBR2-201ENST00000372899 KRTAP4-1Q9BYQ7 146 aa5.35□□□□□ -1.55
UBR2-201ENST00000372899 KRTAP19-4Q3LI73 84 aa5.34□□□□□ -1.55
UBR2-201ENST00000372899 DNAH9Q9NYC9 4486 aa5.31□□□□□ -1.56
UBR2-201ENST00000372899 MT1FP04733 61 aa5.29□□□□□ -1.56
UBR2-201ENST00000372899 ANK2Q01484 3957 aa5.24□□□□□ -1.57
UBR2-201ENST00000372899 DNAH6Q9C0G6 4158 aa5.2□□□□□ -1.58
UBR2-201ENST00000372899 LYSTQ99698 3801 aa5.2□□□□□ -1.58
UBR2-201ENST00000372899 FAT2Q9NYQ8 4349 aa5.19□□□□□ -1.58
UBR2-201ENST00000372899 PRKDCP78527 4128 aaKnown RBP5.18□□□□□ -1.58
UBR2-201ENST00000372899 VPS13BQ7Z7G8 4022 aa5.18□□□□□ -1.58
UBR2-201ENST00000372899 FRAS1Q86XX4 4008 aa5.15□□□□□ -1.58
UBR2-201ENST00000372899 PLECQ15149 4684 aaKnown RBP5.15□□□□□ -1.59
UBR2-201ENST00000372899 LCE2CQ5TA81 110 aa5.12□□□□□ -1.59
UBR2-201ENST00000372899 DNAH10Q8IVF4 4471 aa5.12□□□□□ -1.59
UBR2-201ENST00000372899 KMT2AQ03164 3969 aa5.11□□□□□ -1.59
UBR2-201ENST00000372899 MT1GP13640 62 aa5.11□□□□□ -1.59
UBR2-201ENST00000372899 VPS13DQ5THJ4 4388 aa5.07□□□□□ -1.6
UBR2-201ENST00000372899 STARD9Q9P2P6 4700 aa5.05□□□□□ -1.6
UBR2-201ENST00000372899 LCE2DQ5TA82 110 aaPredicted RBP5.03□□□□□ -1.6
UBR2-201ENST00000372899 DNAH11Q96DT5 4516 aa5.03□□□□□ -1.6
UBR2-201ENST00000372899 DNHD1Q96M86 4753 aa5□□□□□ -1.61
UBR2-201ENST00000372899 DNAH17Q9UFH2 4485 aa4.99□□□□□ -1.61
UBR2-201ENST00000372899 LCE3DQ9BYE3 92 aa4.98□□□□□ -1.61
UBR2-201ENST00000372899 DNAH5Q8TE73 4624 aa4.97□□□□□ -1.61
UBR2-201ENST00000372899 DNAH8Q96JB1 4490 aa4.96□□□□□ -1.62
UBR2-201ENST00000372899 DYNC2H1Q8NCM8 4307 aaKnown RBP4.95□□□□□ -1.62
UBR2-201ENST00000372899 HECTD4Q9Y4D8 3996 aa4.94□□□□□ -1.62
UBR2-201ENST00000372899 KRTAP19-1Q8IUB9 90 aa4.9□□□□□ -1.63
UBR2-201ENST00000372899 SPRR5A0A1B0GTR4 108 aa4.89□□□□□ -1.63
UBR2-201ENST00000372899 KRTAP19-8Q3LI54 63 aa4.87□□□□□ -1.63
UBR2-201ENST00000372899 MT4P47944 62 aa4.85□□□□□ -1.63
UBR2-201ENST00000372899 LCE3EQ5T5B0 92 aa4.84□□□□□ -1.63
UBR2-201ENST00000372899 LRP1BQ9NZR2 4599 aa4.84□□□□□ -1.63
UBR2-201ENST00000372899 MT1XP80297 61 aa4.81□□□□□ -1.64
UBR2-201ENST00000372899 FAT1Q14517 4588 aa4.79□□□□□ -1.64
UBR2-201ENST00000372899 FLGP20930 4061 aaPredicted RBP4.74□□□□□ -1.65
UBR2-201ENST00000372899 DYNC1H1Q14204 4646 aaKnown RBP4.73□□□□□ -1.65
UBR2-201ENST00000372899 PKHD1L1Q86WI1 4243 aa4.73□□□□□ -1.65
UBR2-201ENST00000372899 KRTAP4-8A0A0G2JLE6 195 aa4.72□□□□□ -1.65
UBR2-201ENST00000372899 KRTAP4-8Q9BYQ9 185 aa4.72□□□□□ -1.65
UBR2-201ENST00000372899 LCE1BQ5T7P3 118 aa4.69□□□□□ -1.66
UBR2-201ENST00000372899 PKHD1P08F94 4074 aa4.68□□□□□ -1.66
UBR2-201ENST00000372899 KRTAP19-3Q7Z4W3 81 aa4.68□□□□□ -1.66
UBR2-201ENST00000372899 LCE1DQ5T752 114 aa4.64□□□□□ -1.67
UBR2-201ENST00000372899 LRP1Q07954 4544 aaKnown RBP4.63□□□□□ -1.67
UBR2-201ENST00000372899 MT3P25713 68 aa4.62□□□□□ -1.67
UBR2-201ENST00000372899 MT1BP07438 61 aa4.62□□□□□ -1.67
UBR2-201ENST00000372899 KRTAP9-8Q9BYQ0 159 aa4.61□□□□□ -1.67
UBR2-201ENST00000372899 SACSQ9NZJ4 4579 aa4.59□□□□□ -1.67
UBR2-201ENST00000372899 MYCBP2O75592 4640 aa4.57□□□□□ -1.68
UBR2-201ENST00000372899 APOBP04114 4563 aaKnown RBP4.57□□□□□ -1.68
UBR2-201ENST00000372899 RYR1P21817 5038 aa4.56□□□□□ -1.68
UBR2-201ENST00000372899 MT1LQ93083 61 aa4.56□□□□□ -1.68
UBR2-201ENST00000372899 KRTAP9-3Q9BYQ3 159 aa4.53□□□□□ -1.68
UBR2-201ENST00000372899 KRTAP9-2Q9BYQ4 174 aa4.51□□□□□ -1.69
UBR2-201ENST00000372899 PKD1P98161 4303 aa4.5□□□□□ -1.69
UBR2-201ENST00000372899 FAT3Q8TDW7 4589 aa4.49□□□□□ -1.69
UBR2-201ENST00000372899 LCE5AQ5TCM9 118 aa4.49□□□□□ -1.69
UBR2-201ENST00000372899 KRTAP17-1Q9BYP8 105 aa4.49□□□□□ -1.69
UBR2-201ENST00000372899 PRM1P04553 51 aa4.48□□□□□ -1.69
UBR2-201ENST00000372899 RYR3Q15413 4870 aa4.48□□□□□ -1.69
UBR2-201ENST00000372899 KIAA1109Q2LD37 5005 aa4.47□□□□□ -1.69
UBR2-201ENST00000372899 HYDINQ4G0P3 5121 aa4.46□□□□□ -1.7
UBR2-201ENST00000372899 KRTAP20-1Q3LI63 56 aa4.46□□□□□ -1.7
UBR2-201ENST00000372899 MT1EP04732 61 aa4.41□□□□□ -1.7
UBR2-201ENST00000372899 HSPG2P98160 4391 aa4.41□□□□□ -1.7
UBR2-201ENST00000372899 KRTAP4-7Q9BYR0 210 aa4.37□□□□□ -1.71
UBR2-201ENST00000372899 KRTAP9-6A0A140TA67 174 aa4.36□□□□□ -1.71
UBR2-201ENST00000372899 KRTAP19-6Q3LI70 58 aa4.35□□□□□ -1.71
UBR2-201ENST00000372899 MT1MQ8N339 61 aa4.35□□□□□ -1.71
UBR2-201ENST00000372899 RYR2Q92736 4967 aa4.31□□□□□ -1.72
UBR2-201ENST00000372899 LRP2P98164 4655 aa4.3□□□□□ -1.72
UBR2-201ENST00000372899 KMT2CQ8NEZ4 4911 aaKnown RBP4.29□□□□□ -1.72
UBR2-201ENST00000372899 LCE1CQ5T751 118 aa4.28□□□□□ -1.72
UBR2-201ENST00000372899 LCE1EQ5T753 118 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 150.5 ms