RNA–Protein interactions for RNA: ENST00000372443.6

KCNMA1-209, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,059 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-209ENST00000372443 LORP23490 312 aaPredicted RBP9.15□□□□□ -0.95
KCNMA1-209ENST00000372443 KRTAP23-1A1A580 65 aa9.14□□□□□ -0.95
KCNMA1-209ENST00000372443 DNAH11Q96DT5 4516 aa9.13□□□□□ -0.95
KCNMA1-209ENST00000372443 PLECQ15149 4684 aaKnown RBP9.1□□□□□ -0.95
KCNMA1-209ENST00000372443 DNAH1Q9P2D7 4330 aa9.07□□□□□ -0.96
KCNMA1-209ENST00000372443 DNAH10Q8IVF4 4471 aa9.05□□□□□ -0.96
KCNMA1-209ENST00000372443 KRTAP10-12P60413 245 aa9.02□□□□□ -0.97
KCNMA1-209ENST00000372443 DNHD1Q96M86 4753 aa8.95□□□□□ -0.98
KCNMA1-209ENST00000372443 VPS13DQ5THJ4 4388 aa8.95□□□□□ -0.98
KCNMA1-209ENST00000372443 DNAH17Q9UFH2 4485 aa8.91□□□□□ -0.98
KCNMA1-209ENST00000372443 KRTAP12-3P60328 96 aa8.87□□□□□ -0.99
KCNMA1-209ENST00000372443 LCE3AQ5TA76 89 aa8.86□□□□□ -0.99
KCNMA1-209ENST00000372443 FAT1Q14517 4588 aa8.85□□□□□ -0.99
KCNMA1-209ENST00000372443 DNAH8Q96JB1 4490 aa8.81□□□□□ -1
KCNMA1-209ENST00000372443 DNAH2Q9P225 4427 aa8.74□□□□□ -1.01
KCNMA1-209ENST00000372443 ANK2Q01484 3957 aa8.72□□□□□ -1.01
KCNMA1-209ENST00000372443 DYNC1H1Q14204 4646 aaKnown RBP8.72□□□□□ -1.01
KCNMA1-209ENST00000372443 STARD9Q9P2P6 4700 aa8.71□□□□□ -1.02
KCNMA1-209ENST00000372443 KRTAP4-1Q9BYQ7 146 aa8.7□□□□□ -1.02
KCNMA1-209ENST00000372443 CRCT1Q9UGL9 99 aa8.7□□□□□ -1.02
KCNMA1-209ENST00000372443 LRP1BQ9NZR2 4599 aa8.68□□□□□ -1.02
KCNMA1-209ENST00000372443 DNAH3Q8TD57 4116 aa8.68□□□□□ -1.02
KCNMA1-209ENST00000372443 RYR1P21817 5038 aa8.6□□□□□ -1.03
KCNMA1-209ENST00000372443 DYNC2H1Q8NCM8 4307 aaKnown RBP8.59□□□□□ -1.03
KCNMA1-209ENST00000372443 FAT2Q9NYQ8 4349 aa8.5□□□□□ -1.05
KCNMA1-209ENST00000372443 SACSQ9NZJ4 4579 aa8.5□□□□□ -1.05
KCNMA1-209ENST00000372443 MYCBP2O75592 4640 aa8.5□□□□□ -1.05
KCNMA1-209ENST00000372443 DNAH6Q9C0G6 4158 aa8.5□□□□□ -1.05
KCNMA1-209ENST00000372443 PRKDCP78527 4128 aaKnown RBP8.47□□□□□ -1.05
KCNMA1-209ENST00000372443 LYSTQ99698 3801 aa8.42□□□□□ -1.06
KCNMA1-209ENST00000372443 MT1HP80294 61 aa8.41□□□□□ -1.06
KCNMA1-209ENST00000372443 KMT2AQ03164 3969 aa8.41□□□□□ -1.06
KCNMA1-209ENST00000372443 APOBP04114 4563 aaKnown RBP8.37□□□□□ -1.07
KCNMA1-209ENST00000372443 VPS13BQ7Z7G8 4022 aa8.32□□□□□ -1.08
KCNMA1-209ENST00000372443 KIAA1109Q2LD37 5005 aa8.29□□□□□ -1.08
KCNMA1-209ENST00000372443 MT2AP02795 61 aa8.27□□□□□ -1.09
KCNMA1-209ENST00000372443 SPRR2GQ9BYE4 73 aa8.27□□□□□ -1.09
KCNMA1-209ENST00000372443 KRTAP8-1Q8IUC2 63 aa8.22□□□□□ -1.09
KCNMA1-209ENST00000372443 CMYA5Q8N3K9 4069 aa8.18□□□□□ -1.1
KCNMA1-209ENST00000372443 RYR2Q92736 4967 aa8.17□□□□□ -1.1
KCNMA1-209ENST00000372443 FAT3Q8TDW7 4589 aa8.15□□□□□ -1.1
KCNMA1-209ENST00000372443 MT1FP04733 61 aa8.15□□□□□ -1.1
KCNMA1-209ENST00000372443 FRAS1Q86XX4 4008 aa8.14□□□□□ -1.11
KCNMA1-209ENST00000372443 LRP1Q07954 4544 aaKnown RBP8.14□□□□□ -1.11
KCNMA1-209ENST00000372443 KRTAP10-5P60370 271 aa8.13□□□□□ -1.11
KCNMA1-209ENST00000372443 KRTAP17-1Q9BYP8 105 aa8.11□□□□□ -1.11
KCNMA1-209ENST00000372443 RYR3Q15413 4870 aa8.1□□□□□ -1.11
KCNMA1-209ENST00000372443 BIRC6Q9NR09 4857 aa8.05□□□□□ -1.12
KCNMA1-209ENST00000372443 DNAH7Q8WXX0 4024 aa8□□□□□ -1.13
KCNMA1-209ENST00000372443 KRTAP19-5Q3LI72 72 aa7.93□□□□□ -1.14
KCNMA1-209ENST00000372443 HECTD4Q9Y4D8 3996 aa7.91□□□□□ -1.14
KCNMA1-209ENST00000372443 KRTAP19-1Q8IUB9 90 aa7.87□□□□□ -1.15
KCNMA1-209ENST00000372443 LRP2P98164 4655 aa7.84□□□□□ -1.15
KCNMA1-209ENST00000372443 HERC1Q15751 4861 aa7.81□□□□□ -1.16
KCNMA1-209ENST00000372443 KRTAP19-8Q3LI54 63 aa7.8□□□□□ -1.16
KCNMA1-209ENST00000372443 LCE3CQ5T5A8 94 aa7.8□□□□□ -1.16
KCNMA1-209ENST00000372443 HSPG2P98160 4391 aa7.8□□□□□ -1.16
KCNMA1-209ENST00000372443 KRTAP19-4Q3LI73 84 aa7.78□□□□□ -1.16
KCNMA1-209ENST00000372443 HERC2O95714 4834 aa7.76□□□□□ -1.17
KCNMA1-209ENST00000372443 KRTAP10-7P60409 375 aaPredicted RBP7.73□□□□□ -1.17
KCNMA1-209ENST00000372443 HYDINQ4G0P3 5121 aa7.68□□□□□ -1.18
KCNMA1-209ENST00000372443 SPRR2FQ96RM1 72 aa7.67□□□□□ -1.18
KCNMA1-209ENST00000372443 PKHD1P08F94 4074 aa7.62□□□□□ -1.19
KCNMA1-209ENST00000372443 LCE2CQ5TA81 110 aa7.59□□□□□ -1.19
KCNMA1-209ENST00000372443 MT1XP80297 61 aa7.59□□□□□ -1.19
KCNMA1-209ENST00000372443 KRTAP9-8Q9BYQ0 159 aa7.56□□□□□ -1.2
KCNMA1-209ENST00000372443 PKHD1L1Q86WI1 4243 aa7.53□□□□□ -1.2
KCNMA1-209ENST00000372443 MT1BP07438 61 aa7.52□□□□□ -1.21
KCNMA1-209ENST00000372443 PKD1P98161 4303 aa7.47□□□□□ -1.21
KCNMA1-209ENST00000372443 SPRR5A0A1B0GTR4 108 aa7.43□□□□□ -1.22
KCNMA1-209ENST00000372443 KMT2CQ8NEZ4 4911 aaKnown RBP7.42□□□□□ -1.22
KCNMA1-209ENST00000372443 KRTAP9-3Q9BYQ3 159 aa7.41□□□□□ -1.22
KCNMA1-209ENST00000372443 LPAP08519 4548 aa7.4□□□□□ -1.22
KCNMA1-209ENST00000372443 PCLOQ9Y6V0 5065 aa7.37□□□□□ -1.23
KCNMA1-209ENST00000372443 KRTAP4-8A0A0G2JLE6 195 aa7.35□□□□□ -1.23
KCNMA1-209ENST00000372443 KRTAP4-8Q9BYQ9 185 aa7.35□□□□□ -1.23
KCNMA1-209ENST00000372443 KRTAP19-2Q3LHN2 52 aa7.35□□□□□ -1.23
KCNMA1-209ENST00000372443 MT1GP13640 62 aa7.19□□□□□ -1.26
KCNMA1-209ENST00000372443 TNXBP22105 4242 aa7.18□□□□□ -1.26
KCNMA1-209ENST00000372443 LCE3BQ5TA77 95 aa7.17□□□□□ -1.26
KCNMA1-209ENST00000372443 SPRR2EP22531 72 aa7.13□□□□□ -1.27
KCNMA1-209ENST00000372443 SPRR2BP35325 72 aa7.13□□□□□ -1.27
KCNMA1-209ENST00000372443 SPRR2AP35326 72 aa7.13□□□□□ -1.27
KCNMA1-209ENST00000372443 KRTAP12-4P60329 112 aa7.13□□□□□ -1.27
KCNMA1-209ENST00000372443 MUC17Q685J3 4493 aa7.12□□□□□ -1.27
KCNMA1-209ENST00000372443 ABCA13Q86UQ4 5058 aa7.06□□□□□ -1.28
KCNMA1-209ENST00000372443 SYNE1Q8NF91 8797 aaKnown RBP7.04□□□□□ -1.28
KCNMA1-209ENST00000372443 EPPK1P58107 5090 aaKnown RBP7.04□□□□□ -1.28
KCNMA1-209ENST00000372443 LCE2DQ5TA82 110 aaPredicted RBP7.02□□□□□ -1.29
KCNMA1-209ENST00000372443 LCE2AQ5TA79 106 aaPredicted RBP7.02□□□□□ -1.29
KCNMA1-209ENST00000372443 KRTAP4-7Q9BYR0 210 aa7.02□□□□□ -1.29
KCNMA1-209ENST00000372443 LCE2BO14633 110 aa7□□□□□ -1.29
KCNMA1-209ENST00000372443 FLGP20930 4061 aaPredicted RBP6.95□□□□□ -1.3
KCNMA1-209ENST00000372443 KRTAP19-6Q3LI70 58 aa6.95□□□□□ -1.3
KCNMA1-209ENST00000372443 UBR4Q5T4S7 5183 aa6.9□□□□□ -1.3
KCNMA1-209ENST00000372443 SPRR2DP22532 72 aa6.89□□□□□ -1.31
KCNMA1-209ENST00000372443 MT1LQ93083 61 aa6.84□□□□□ -1.32
KCNMA1-209ENST00000372443 KRTAP9-2Q9BYQ4 174 aa6.83□□□□□ -1.32
KCNMA1-209ENST00000372443 FSIP2Q5CZC0 6907 aa6.8□□□□□ -1.32
KCNMA1-209ENST00000372443 MT1EP04732 61 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms