RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 KRTAP12-3P60328 96 aa6.14□□□□□ -1.43
RAPGEF1-202ENST00000372190 KRTAP10-5P60370 271 aa6.12□□□□□ -1.43
RAPGEF1-202ENST00000372190 DNAH1Q9P2D7 4330 aa6.12□□□□□ -1.43
RAPGEF1-202ENST00000372190 ZNF469Q96JG9 3925 aaPredicted RBP6.08□□□□□ -1.44
RAPGEF1-202ENST00000372190 DNAH5Q8TE73 4624 aa6.03□□□□□ -1.44
RAPGEF1-202ENST00000372190 DNAH11Q96DT5 4516 aa5.99□□□□□ -1.45
RAPGEF1-202ENST00000372190 LCE3AQ5TA76 89 aa5.97□□□□□ -1.45
RAPGEF1-202ENST00000372190 PLECQ15149 4684 aaKnown RBP5.94□□□□□ -1.46
RAPGEF1-202ENST00000372190 DNHD1Q96M86 4753 aa5.94□□□□□ -1.46
RAPGEF1-202ENST00000372190 DNAH10Q8IVF4 4471 aa5.93□□□□□ -1.46
RAPGEF1-202ENST00000372190 VPS13DQ5THJ4 4388 aa5.89□□□□□ -1.47
RAPGEF1-202ENST00000372190 MT1HP80294 61 aa5.86□□□□□ -1.47
RAPGEF1-202ENST00000372190 KRTAP4-1Q9BYQ7 146 aa5.84□□□□□ -1.47
RAPGEF1-202ENST00000372190 DNAH17Q9UFH2 4485 aa5.82□□□□□ -1.48
RAPGEF1-202ENST00000372190 ANK2Q01484 3957 aa5.81□□□□□ -1.48
RAPGEF1-202ENST00000372190 KRTAP8-1Q8IUC2 63 aa5.81□□□□□ -1.48
RAPGEF1-202ENST00000372190 DYNC1H1Q14204 4646 aaKnown RBP5.81□□□□□ -1.48
RAPGEF1-202ENST00000372190 FAT2Q9NYQ8 4349 aa5.8□□□□□ -1.48
RAPGEF1-202ENST00000372190 LORP23490 312 aaPredicted RBP5.79□□□□□ -1.48
RAPGEF1-202ENST00000372190 DNAH2Q9P225 4427 aa5.79□□□□□ -1.48
RAPGEF1-202ENST00000372190 CSMD3Q7Z407 3707 aa5.78□□□□□ -1.48
RAPGEF1-202ENST00000372190 DNAH3Q8TD57 4116 aa5.77□□□□□ -1.49
RAPGEF1-202ENST00000372190 LRP1BQ9NZR2 4599 aa5.76□□□□□ -1.49
RAPGEF1-202ENST00000372190 STARD9Q9P2P6 4700 aa5.75□□□□□ -1.49
RAPGEF1-202ENST00000372190 DYNC2H1Q8NCM8 4307 aaKnown RBP5.73□□□□□ -1.49
RAPGEF1-202ENST00000372190 PRKDCP78527 4128 aaKnown RBP5.7□□□□□ -1.5
RAPGEF1-202ENST00000372190 MT2AP02795 61 aa5.68□□□□□ -1.5
RAPGEF1-202ENST00000372190 DNAH6Q9C0G6 4158 aa5.64□□□□□ -1.51
RAPGEF1-202ENST00000372190 RYR1P21817 5038 aa5.6□□□□□ -1.51
RAPGEF1-202ENST00000372190 SACSQ9NZJ4 4579 aa5.6□□□□□ -1.51
RAPGEF1-202ENST00000372190 CMYA5Q8N3K9 4069 aa5.59□□□□□ -1.51
RAPGEF1-202ENST00000372190 FAT1Q14517 4588 aa5.56□□□□□ -1.52
RAPGEF1-202ENST00000372190 MT1FP04733 61 aa5.55□□□□□ -1.52
RAPGEF1-202ENST00000372190 KMT2AQ03164 3969 aa5.54□□□□□ -1.52
RAPGEF1-202ENST00000372190 SPRR2GQ9BYE4 73 aa5.5□□□□□ -1.53
RAPGEF1-202ENST00000372190 KRTAP17-1Q9BYP8 105 aa5.5□□□□□ -1.53
RAPGEF1-202ENST00000372190 DNAH8Q96JB1 4490 aa5.49□□□□□ -1.53
RAPGEF1-202ENST00000372190 DNAH7Q8WXX0 4024 aa5.48□□□□□ -1.53
RAPGEF1-202ENST00000372190 RYR3Q15413 4870 aa5.47□□□□□ -1.53
RAPGEF1-202ENST00000372190 SPRR2FQ96RM1 72 aa5.47□□□□□ -1.53
RAPGEF1-202ENST00000372190 KRTAP10-7P60409 375 aaPredicted RBP5.44□□□□□ -1.54
RAPGEF1-202ENST00000372190 VPS13BQ7Z7G8 4022 aa5.43□□□□□ -1.54
RAPGEF1-202ENST00000372190 APOBP04114 4563 aaKnown RBP5.36□□□□□ -1.55
RAPGEF1-202ENST00000372190 FAT3Q8TDW7 4589 aa5.33□□□□□ -1.56
RAPGEF1-202ENST00000372190 BIRC6Q9NR09 4857 aa5.31□□□□□ -1.56
RAPGEF1-202ENST00000372190 LCE3CQ5T5A8 94 aa5.29□□□□□ -1.56
RAPGEF1-202ENST00000372190 RYR2Q92736 4967 aa5.29□□□□□ -1.56
RAPGEF1-202ENST00000372190 LYSTQ99698 3801 aa5.29□□□□□ -1.56
RAPGEF1-202ENST00000372190 SPRR2EP22531 72 aa5.24□□□□□ -1.57
RAPGEF1-202ENST00000372190 SPRR2BP35325 72 aa5.24□□□□□ -1.57
RAPGEF1-202ENST00000372190 SPRR2AP35326 72 aa5.24□□□□□ -1.57
RAPGEF1-202ENST00000372190 KRTAP19-5Q3LI72 72 aa5.24□□□□□ -1.57
RAPGEF1-202ENST00000372190 KRTAP19-4Q3LI73 84 aa5.24□□□□□ -1.57
RAPGEF1-202ENST00000372190 HSPG2P98160 4391 aa5.22□□□□□ -1.57
RAPGEF1-202ENST00000372190 KIAA1109Q2LD37 5005 aa5.21□□□□□ -1.58
RAPGEF1-202ENST00000372190 KRTAP12-4P60329 112 aa5.2□□□□□ -1.58
RAPGEF1-202ENST00000372190 PKHD1L1Q86WI1 4243 aa5.18□□□□□ -1.58
RAPGEF1-202ENST00000372190 HERC1Q15751 4861 aa5.18□□□□□ -1.58
RAPGEF1-202ENST00000372190 HECTD4Q9Y4D8 3996 aa5.16□□□□□ -1.58
RAPGEF1-202ENST00000372190 FRAS1Q86XX4 4008 aa5.16□□□□□ -1.58
RAPGEF1-202ENST00000372190 KRTAP19-8Q3LI54 63 aa5.15□□□□□ -1.59
RAPGEF1-202ENST00000372190 HERC2O95714 4834 aa5.1□□□□□ -1.59
RAPGEF1-202ENST00000372190 KRTAP19-1Q8IUB9 90 aa5.1□□□□□ -1.59
RAPGEF1-202ENST00000372190 KRTAP9-8Q9BYQ0 159 aa5.09□□□□□ -1.59
RAPGEF1-202ENST00000372190 HYDINQ4G0P3 5121 aa5.09□□□□□ -1.59
RAPGEF1-202ENST00000372190 LRP1Q07954 4544 aaKnown RBP5.09□□□□□ -1.6
RAPGEF1-202ENST00000372190 SPRR2DP22532 72 aa5.08□□□□□ -1.6
RAPGEF1-202ENST00000372190 MT3P25713 68 aa5.06□□□□□ -1.6
RAPGEF1-202ENST00000372190 LCE2CQ5TA81 110 aa5.04□□□□□ -1.6
RAPGEF1-202ENST00000372190 KRTAP9-3Q9BYQ3 159 aa5□□□□□ -1.61
RAPGEF1-202ENST00000372190 MT1BP07438 61 aa4.99□□□□□ -1.61
RAPGEF1-202ENST00000372190 LCE2BO14633 110 aa4.99□□□□□ -1.61
RAPGEF1-202ENST00000372190 MT1XP80297 61 aa4.99□□□□□ -1.61
RAPGEF1-202ENST00000372190 LCE3BQ5TA77 95 aa4.98□□□□□ -1.61
RAPGEF1-202ENST00000372190 MYCBP2O75592 4640 aa4.98□□□□□ -1.61
RAPGEF1-202ENST00000372190 PKD1P98161 4303 aa4.97□□□□□ -1.61
RAPGEF1-202ENST00000372190 PCLOQ9Y6V0 5065 aa4.91□□□□□ -1.62
RAPGEF1-202ENST00000372190 PKHD1P08F94 4074 aa4.91□□□□□ -1.62
RAPGEF1-202ENST00000372190 KRTAP9-2Q9BYQ4 174 aa4.9□□□□□ -1.63
RAPGEF1-202ENST00000372190 LCE3DQ9BYE3 92 aa4.89□□□□□ -1.63
RAPGEF1-202ENST00000372190 SPRR5A0A1B0GTR4 108 aa4.87□□□□□ -1.63
RAPGEF1-202ENST00000372190 LCE3EQ5T5B0 92 aa4.87□□□□□ -1.63
RAPGEF1-202ENST00000372190 LPAP08519 4548 aa4.86□□□□□ -1.63
RAPGEF1-202ENST00000372190 TNXBP22105 4242 aa4.83□□□□□ -1.64
RAPGEF1-202ENST00000372190 KRTAP4-8A0A0G2JLE6 195 aa4.83□□□□□ -1.64
RAPGEF1-202ENST00000372190 KRTAP4-8Q9BYQ9 185 aa4.83□□□□□ -1.64
RAPGEF1-202ENST00000372190 MT1GP13640 62 aa4.78□□□□□ -1.64
RAPGEF1-202ENST00000372190 MUC17Q685J3 4493 aa4.77□□□□□ -1.65
RAPGEF1-202ENST00000372190 LRP2P98164 4655 aa4.77□□□□□ -1.65
RAPGEF1-202ENST00000372190 KRTAP19-2Q3LHN2 52 aa4.76□□□□□ -1.65
RAPGEF1-202ENST00000372190 KMT2CQ8NEZ4 4911 aaKnown RBP4.72□□□□□ -1.65
RAPGEF1-202ENST00000372190 KRTAP9-6A0A140TA67 174 aa4.71□□□□□ -1.66
RAPGEF1-202ENST00000372190 LCE2DQ5TA82 110 aaPredicted RBP4.71□□□□□ -1.66
RAPGEF1-202ENST00000372190 EPPK1P58107 5090 aaKnown RBP4.67□□□□□ -1.66
RAPGEF1-202ENST00000372190 KRTAP19-6Q3LI70 58 aa4.65□□□□□ -1.66
RAPGEF1-202ENST00000372190 KRTAP19-3Q7Z4W3 81 aa4.64□□□□□ -1.67
RAPGEF1-202ENST00000372190 PRM1P04553 51 aa4.63□□□□□ -1.67
RAPGEF1-202ENST00000372190 LCE2AQ5TA79 106 aaPredicted RBP4.6□□□□□ -1.67
RAPGEF1-202ENST00000372190 ABCA13Q86UQ4 5058 aa4.57□□□□□ -1.68
RAPGEF1-202ENST00000372190 FLGP20930 4061 aaPredicted RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms