RNA–Protein interactions for RNA: ENST00000367390.7

LHX9-203, Transcript of LIM homeobox 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LHX9, Length 7,413 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX9-203ENST00000367390 DNAH3Q8TD57 4116 aa4.47□□□□□ -1.69
LHX9-203ENST00000367390 KRTAP23-1A1A580 65 aa4.41□□□□□ -1.7
LHX9-203ENST00000367390 VPS13BQ7Z7G8 4022 aa4.38□□□□□ -1.71
LHX9-203ENST00000367390 DNAH7Q8WXX0 4024 aa4.38□□□□□ -1.71
LHX9-203ENST00000367390 DNAH10Q8IVF4 4471 aa4.36□□□□□ -1.71
LHX9-203ENST00000367390 DNAH9Q9NYC9 4486 aa4.35□□□□□ -1.71
LHX9-203ENST00000367390 HECTD4Q9Y4D8 3996 aa4.34□□□□□ -1.72
LHX9-203ENST00000367390 DNAH1Q9P2D7 4330 aa4.34□□□□□ -1.72
LHX9-203ENST00000367390 KRTAP12-3P60328 96 aa4.33□□□□□ -1.72
LHX9-203ENST00000367390 ALMS1Q8TCU4 4167 aa4.33□□□□□ -1.72
LHX9-203ENST00000367390 KRTAP3-1Q9BYR8 98 aa4.31□□□□□ -1.72
LHX9-203ENST00000367390 PRKDCP78527 4128 aaKnown RBP4.31□□□□□ -1.72
LHX9-203ENST00000367390 DNAH2Q9P225 4427 aa4.3□□□□□ -1.72
LHX9-203ENST00000367390 LCE3AQ5TA76 89 aa4.23□□□□□ -1.73
LHX9-203ENST00000367390 DNAH6Q9C0G6 4158 aa4.21□□□□□ -1.74
LHX9-203ENST00000367390 KRTAP8-1Q8IUC2 63 aa4.19□□□□□ -1.74
LHX9-203ENST00000367390 LORP23490 312 aaPredicted RBP4.18□□□□□ -1.74
LHX9-203ENST00000367390 MT1HL1P0DM35 61 aa4.14□□□□□ -1.75
LHX9-203ENST00000367390 FAT2Q9NYQ8 4349 aa4.1□□□□□ -1.75
LHX9-203ENST00000367390 KRTAP3-3Q9BYR6 98 aa4.09□□□□□ -1.75
LHX9-203ENST00000367390 KRTAP10-4P60372 401 aaPredicted RBP4.09□□□□□ -1.76
LHX9-203ENST00000367390 KRTAP4-5Q9BYR2 181 aa4.08□□□□□ -1.76
LHX9-203ENST00000367390 PLECQ15149 4684 aaKnown RBP4.08□□□□□ -1.76
LHX9-203ENST00000367390 VPS13DQ5THJ4 4388 aa4.07□□□□□ -1.76
LHX9-203ENST00000367390 STARD9Q9P2P6 4700 aa4.07□□□□□ -1.76
LHX9-203ENST00000367390 DNAH11Q96DT5 4516 aa4.07□□□□□ -1.76
LHX9-203ENST00000367390 DYNC2H1Q8NCM8 4307 aaKnown RBP4.06□□□□□ -1.76
LHX9-203ENST00000367390 KRTAP3-2Q9BYR7 98 aa4.03□□□□□ -1.76
LHX9-203ENST00000367390 PKHD1P08F94 4074 aa3.99□□□□□ -1.77
LHX9-203ENST00000367390 DNAH17Q9UFH2 4485 aa3.94□□□□□ -1.78
LHX9-203ENST00000367390 LCE2DQ5TA82 110 aaPredicted RBP3.93□□□□□ -1.78
LHX9-203ENST00000367390 DNAH8Q96JB1 4490 aa3.93□□□□□ -1.78
LHX9-203ENST00000367390 LRP1BQ9NZR2 4599 aa3.85□□□□□ -1.79
LHX9-203ENST00000367390 SPRR2FQ96RM1 72 aa3.83□□□□□ -1.8
LHX9-203ENST00000367390 DNAH5Q8TE73 4624 aa3.79□□□□□ -1.8
LHX9-203ENST00000367390 LCE3BQ5TA77 95 aa3.75□□□□□ -1.81
LHX9-203ENST00000367390 KRTAP4-1Q9BYQ7 146 aa3.73□□□□□ -1.81
LHX9-203ENST00000367390 FAT1Q14517 4588 aa3.71□□□□□ -1.82
LHX9-203ENST00000367390 PKD1P98161 4303 aa3.71□□□□□ -1.82
LHX9-203ENST00000367390 PKHD1L1Q86WI1 4243 aa3.69□□□□□ -1.82
LHX9-203ENST00000367390 FLGP20930 4061 aaPredicted RBP3.68□□□□□ -1.82
LHX9-203ENST00000367390 KRTAP19-5Q3LI72 72 aa3.67□□□□□ -1.82
LHX9-203ENST00000367390 FAT3Q8TDW7 4589 aa3.67□□□□□ -1.82
LHX9-203ENST00000367390 TNXBP22105 4242 aa3.67□□□□□ -1.82
LHX9-203ENST00000367390 LCE3CQ5T5A8 94 aa3.66□□□□□ -1.82
LHX9-203ENST00000367390 SPRR2EP22531 72 aa3.65□□□□□ -1.82
LHX9-203ENST00000367390 SPRR2BP35325 72 aa3.65□□□□□ -1.82
LHX9-203ENST00000367390 SPRR2AP35326 72 aa3.65□□□□□ -1.82
LHX9-203ENST00000367390 HSPG2P98160 4391 aa3.65□□□□□ -1.83
LHX9-203ENST00000367390 KRTAP12-4P60329 112 aa3.62□□□□□ -1.83
LHX9-203ENST00000367390 MT1HP80294 61 aa3.62□□□□□ -1.83
LHX9-203ENST00000367390 LRP1Q07954 4544 aaKnown RBP3.62□□□□□ -1.83
LHX9-203ENST00000367390 DYNC1H1Q14204 4646 aaKnown RBP3.6□□□□□ -1.83
LHX9-203ENST00000367390 APOBP04114 4563 aaKnown RBP3.59□□□□□ -1.84
LHX9-203ENST00000367390 MYCBP2O75592 4640 aa3.57□□□□□ -1.84
LHX9-203ENST00000367390 SPRR2GQ9BYE4 73 aa3.55□□□□□ -1.84
LHX9-203ENST00000367390 LPAP08519 4548 aa3.55□□□□□ -1.84
LHX9-203ENST00000367390 SACSQ9NZJ4 4579 aa3.54□□□□□ -1.84
LHX9-203ENST00000367390 SPRR2DP22532 72 aa3.54□□□□□ -1.84
LHX9-203ENST00000367390 LCE3EQ5T5B0 92 aa3.52□□□□□ -1.85
LHX9-203ENST00000367390 MT2AP02795 61 aa3.51□□□□□ -1.85
LHX9-203ENST00000367390 DNHD1Q96M86 4753 aa3.5□□□□□ -1.85
LHX9-203ENST00000367390 KRTAP17-1Q9BYP8 105 aa3.49□□□□□ -1.85
LHX9-203ENST00000367390 MT1FP04733 61 aa3.48□□□□□ -1.85
LHX9-203ENST00000367390 LCE3DQ9BYE3 92 aa3.47□□□□□ -1.85
LHX9-203ENST00000367390 MT1GP13640 62 aa3.45□□□□□ -1.86
LHX9-203ENST00000367390 LCE2BO14633 110 aa3.45□□□□□ -1.86
LHX9-203ENST00000367390 MT3P25713 68 aa3.44□□□□□ -1.86
LHX9-203ENST00000367390 SPRR5A0A1B0GTR4 108 aa3.38□□□□□ -1.87
LHX9-203ENST00000367390 LRP2P98164 4655 aa3.36□□□□□ -1.87
LHX9-203ENST00000367390 LCE2CQ5TA81 110 aa3.35□□□□□ -1.87
LHX9-203ENST00000367390 HYDINQ4G0P3 5121 aa3.34□□□□□ -1.87
LHX9-203ENST00000367390 KRTAP19-4Q3LI73 84 aa3.32□□□□□ -1.88
LHX9-203ENST00000367390 KRTAP19-1Q8IUB9 90 aa3.32□□□□□ -1.88
LHX9-203ENST00000367390 LCE1BQ5T7P3 118 aa3.3□□□□□ -1.88
LHX9-203ENST00000367390 LCE2AQ5TA79 106 aaPredicted RBP3.3□□□□□ -1.88
LHX9-203ENST00000367390 PRM1P04553 51 aa3.28□□□□□ -1.88
LHX9-203ENST00000367390 KRTAP19-8Q3LI54 63 aa3.26□□□□□ -1.89
LHX9-203ENST00000367390 RYR1P21817 5038 aa3.25□□□□□ -1.89
LHX9-203ENST00000367390 KRTAP9-8Q9BYQ0 159 aa3.24□□□□□ -1.89
LHX9-203ENST00000367390 MT1XP80297 61 aa3.23□□□□□ -1.89
LHX9-203ENST00000367390 MT4P47944 62 aa3.21□□□□□ -1.9
LHX9-203ENST00000367390 LCE1DQ5T752 114 aa3.21□□□□□ -1.9
LHX9-203ENST00000367390 MT1BP07438 61 aa3.16□□□□□ -1.9
LHX9-203ENST00000367390 RYR3Q15413 4870 aa3.16□□□□□ -1.9
LHX9-203ENST00000367390 KRTAP4-8A0A0G2JLE6 195 aa3.13□□□□□ -1.91
LHX9-203ENST00000367390 KRTAP4-8Q9BYQ9 185 aa3.13□□□□□ -1.91
LHX9-203ENST00000367390 KRTAP9-3Q9BYQ3 159 aa3.12□□□□□ -1.91
LHX9-203ENST00000367390 LCE5AQ5TCM9 118 aa3.12□□□□□ -1.91
LHX9-203ENST00000367390 KIAA1109Q2LD37 5005 aa3.12□□□□□ -1.91
LHX9-203ENST00000367390 RYR2Q92736 4967 aa3.09□□□□□ -1.92
LHX9-203ENST00000367390 MUC17Q685J3 4493 aa3.06□□□□□ -1.92
LHX9-203ENST00000367390 KMT2CQ8NEZ4 4911 aaKnown RBP3.06□□□□□ -1.92
LHX9-203ENST00000367390 LCE4AQ5TA78 99 aa3.05□□□□□ -1.92
LHX9-203ENST00000367390 LCE1CQ5T751 118 aa3.05□□□□□ -1.92
LHX9-203ENST00000367390 LCE1EQ5T753 118 aa3.05□□□□□ -1.92
LHX9-203ENST00000367390 LCE1FQ5T754 118 aa3.05□□□□□ -1.92
LHX9-203ENST00000367390 LCE1AQ5T7P2 110 aa3.05□□□□□ -1.92
LHX9-203ENST00000367390 KRTAP19-2Q3LHN2 52 aa3.04□□□□□ -1.92
LHX9-203ENST00000367390 KRTAP4-7Q9BYR0 210 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms