RNA–Protein interactions for RNA: ENST00000366862.9

FBXO28-201, Transcript of F-box protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FBXO28, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-201ENST00000366862 DNAH11Q96DT5 4516 aa6.23□□□□□ -1.41
FBXO28-201ENST00000366862 DNAH10Q8IVF4 4471 aa6.21□□□□□ -1.42
FBXO28-201ENST00000366862 CSMD2Q7Z408 3487 aa6.2□□□□□ -1.42
FBXO28-201ENST00000366862 BSNQ9UPA5 3926 aa6.15□□□□□ -1.42
FBXO28-201ENST00000366862 SPRR2GQ9BYE4 73 aa6.14□□□□□ -1.43
FBXO28-201ENST00000366862 VPS13CQ709C8 3753 aa6.13□□□□□ -1.43
FBXO28-201ENST00000366862 DNAH1Q9P2D7 4330 aa6.11□□□□□ -1.43
FBXO28-201ENST00000366862 KRTAP4-1Q9BYQ7 146 aa6.08□□□□□ -1.44
FBXO28-201ENST00000366862 DNAH5Q8TE73 4624 aa6.08□□□□□ -1.44
FBXO28-201ENST00000366862 DNAH9Q9NYC9 4486 aa6.07□□□□□ -1.44
FBXO28-201ENST00000366862 KRTAP8-1Q8IUC2 63 aa6.05□□□□□ -1.44
FBXO28-201ENST00000366862 DNAH17Q9UFH2 4485 aa6.05□□□□□ -1.44
FBXO28-201ENST00000366862 LCE3CQ5T5A8 94 aa6.01□□□□□ -1.45
FBXO28-201ENST00000366862 DNAH8Q96JB1 4490 aa5.99□□□□□ -1.45
FBXO28-201ENST00000366862 KRTAP19-4Q3LI73 84 aa5.98□□□□□ -1.45
FBXO28-201ENST00000366862 CSMD3Q7Z407 3707 aa5.97□□□□□ -1.45
FBXO28-201ENST00000366862 AKAP9Q99996 3911 aa5.96□□□□□ -1.46
FBXO28-201ENST00000366862 MT2AP02795 61 aa5.95□□□□□ -1.46
FBXO28-201ENST00000366862 MT1HP80294 61 aa5.93□□□□□ -1.46
FBXO28-201ENST00000366862 KRTAP19-5Q3LI72 72 aa5.93□□□□□ -1.46
FBXO28-201ENST00000366862 VPS13DQ5THJ4 4388 aa5.92□□□□□ -1.46
FBXO28-201ENST00000366862 PLECQ15149 4684 aaKnown RBP5.92□□□□□ -1.46
FBXO28-201ENST00000366862 SPRR5A0A1B0GTR4 108 aa5.88□□□□□ -1.47
FBXO28-201ENST00000366862 DNAH3Q8TD57 4116 aa5.85□□□□□ -1.47
FBXO28-201ENST00000366862 FAT1Q14517 4588 aa5.84□□□□□ -1.47
FBXO28-201ENST00000366862 SACSQ9NZJ4 4579 aa5.84□□□□□ -1.48
FBXO28-201ENST00000366862 MT1FP04733 61 aa5.81□□□□□ -1.48
FBXO28-201ENST00000366862 DYNC2H1Q8NCM8 4307 aaKnown RBP5.72□□□□□ -1.49
FBXO28-201ENST00000366862 DYNC1H1Q14204 4646 aaKnown RBP5.71□□□□□ -1.49
FBXO28-201ENST00000366862 LRP1BQ9NZR2 4599 aa5.68□□□□□ -1.5
FBXO28-201ENST00000366862 KRTAP19-8Q3LI54 63 aa5.66□□□□□ -1.5
FBXO28-201ENST00000366862 KRTAP10-7P60409 375 aaPredicted RBP5.63□□□□□ -1.51
FBXO28-201ENST00000366862 FAT2Q9NYQ8 4349 aa5.63□□□□□ -1.51
FBXO28-201ENST00000366862 KRTAP19-1Q8IUB9 90 aa5.62□□□□□ -1.51
FBXO28-201ENST00000366862 ZNF469Q96JG9 3925 aaPredicted RBP5.6□□□□□ -1.51
FBXO28-201ENST00000366862 ANK2Q01484 3957 aa5.59□□□□□ -1.52
FBXO28-201ENST00000366862 APOBP04114 4563 aaKnown RBP5.58□□□□□ -1.52
FBXO28-201ENST00000366862 CMYA5Q8N3K9 4069 aa5.57□□□□□ -1.52
FBXO28-201ENST00000366862 STARD9Q9P2P6 4700 aa5.56□□□□□ -1.52
FBXO28-201ENST00000366862 KRTAP12-4P60329 112 aa5.55□□□□□ -1.52
FBXO28-201ENST00000366862 MT1XP80297 61 aa5.52□□□□□ -1.53
FBXO28-201ENST00000366862 SPRR2FQ96RM1 72 aa5.49□□□□□ -1.53
FBXO28-201ENST00000366862 DNAH6Q9C0G6 4158 aa5.49□□□□□ -1.53
FBXO28-201ENST00000366862 VPS13BQ7Z7G8 4022 aa5.47□□□□□ -1.53
FBXO28-201ENST00000366862 LRP1Q07954 4544 aaKnown RBP5.41□□□□□ -1.54
FBXO28-201ENST00000366862 MT1BP07438 61 aa5.39□□□□□ -1.55
FBXO28-201ENST00000366862 LCE3BQ5TA77 95 aa5.39□□□□□ -1.55
FBXO28-201ENST00000366862 RYR1P21817 5038 aa5.39□□□□□ -1.55
FBXO28-201ENST00000366862 PRKDCP78527 4128 aaKnown RBP5.38□□□□□ -1.55
FBXO28-201ENST00000366862 DNAH7Q8WXX0 4024 aa5.35□□□□□ -1.55
FBXO28-201ENST00000366862 FAT3Q8TDW7 4589 aa5.33□□□□□ -1.56
FBXO28-201ENST00000366862 FRAS1Q86XX4 4008 aa5.32□□□□□ -1.56
FBXO28-201ENST00000366862 MT1GP13640 62 aa5.32□□□□□ -1.56
FBXO28-201ENST00000366862 KMT2AQ03164 3969 aa5.28□□□□□ -1.56
FBXO28-201ENST00000366862 LCE3DQ9BYE3 92 aa5.26□□□□□ -1.57
FBXO28-201ENST00000366862 KRTAP9-8Q9BYQ0 159 aa5.24□□□□□ -1.57
FBXO28-201ENST00000366862 HSPG2P98160 4391 aa5.24□□□□□ -1.57
FBXO28-201ENST00000366862 MYCBP2O75592 4640 aa5.23□□□□□ -1.57
FBXO28-201ENST00000366862 LCE3EQ5T5B0 92 aa5.23□□□□□ -1.57
FBXO28-201ENST00000366862 DNHD1Q96M86 4753 aa5.22□□□□□ -1.57
FBXO28-201ENST00000366862 HECTD4Q9Y4D8 3996 aa5.21□□□□□ -1.58
FBXO28-201ENST00000366862 KRTAP4-8A0A0G2JLE6 195 aa5.17□□□□□ -1.58
FBXO28-201ENST00000366862 KRTAP4-8Q9BYQ9 185 aa5.17□□□□□ -1.58
FBXO28-201ENST00000366862 RYR3Q15413 4870 aa5.17□□□□□ -1.58
FBXO28-201ENST00000366862 HERC1Q15751 4861 aa5.16□□□□□ -1.58
FBXO28-201ENST00000366862 KRTAP17-1Q9BYP8 105 aa5.15□□□□□ -1.58
FBXO28-201ENST00000366862 KRTAP9-3Q9BYQ3 159 aa5.12□□□□□ -1.59
FBXO28-201ENST00000366862 RYR2Q92736 4967 aa5.11□□□□□ -1.59
FBXO28-201ENST00000366862 LCE2CQ5TA81 110 aa5.1□□□□□ -1.59
FBXO28-201ENST00000366862 LYSTQ99698 3801 aa5.1□□□□□ -1.59
FBXO28-201ENST00000366862 MT1LQ93083 61 aa5.09□□□□□ -1.6
FBXO28-201ENST00000366862 SPRR2EP22531 72 aa5.06□□□□□ -1.6
FBXO28-201ENST00000366862 SPRR2BP35325 72 aa5.06□□□□□ -1.6
FBXO28-201ENST00000366862 SPRR2AP35326 72 aa5.06□□□□□ -1.6
FBXO28-201ENST00000366862 KRTAP4-7Q9BYR0 210 aa4.99□□□□□ -1.61
FBXO28-201ENST00000366862 PKD1P98161 4303 aa4.99□□□□□ -1.61
FBXO28-201ENST00000366862 KRTAP19-3Q7Z4W3 81 aa4.97□□□□□ -1.61
FBXO28-201ENST00000366862 LCE2BO14633 110 aa4.97□□□□□ -1.61
FBXO28-201ENST00000366862 MT1EP04732 61 aa4.96□□□□□ -1.62
FBXO28-201ENST00000366862 KRTAP19-2Q3LHN2 52 aa4.94□□□□□ -1.62
FBXO28-201ENST00000366862 PRM1P04553 51 aa4.9□□□□□ -1.62
FBXO28-201ENST00000366862 SPRR2DP22532 72 aa4.9□□□□□ -1.63
FBXO28-201ENST00000366862 KIAA1109Q2LD37 5005 aa4.9□□□□□ -1.63
FBXO28-201ENST00000366862 LRP2P98164 4655 aa4.88□□□□□ -1.63
FBXO28-201ENST00000366862 PKHD1L1Q86WI1 4243 aa4.85□□□□□ -1.63
FBXO28-201ENST00000366862 HERC2O95714 4834 aa4.81□□□□□ -1.64
FBXO28-201ENST00000366862 KRTAP2-3P0C7H8 128 aa4.8□□□□□ -1.64
FBXO28-201ENST00000366862 KRTAP2-4Q9BYR9 128 aa4.8□□□□□ -1.64
FBXO28-201ENST00000366862 KRTAP2-1Q9BYU5 128 aa4.8□□□□□ -1.64
FBXO28-201ENST00000366862 MT1MQ8N339 61 aa4.78□□□□□ -1.64
FBXO28-201ENST00000366862 MUC17Q685J3 4493 aa4.77□□□□□ -1.65
FBXO28-201ENST00000366862 MT3P25713 68 aa4.73□□□□□ -1.65
FBXO28-201ENST00000366862 FLGP20930 4061 aaPredicted RBP4.73□□□□□ -1.65
FBXO28-201ENST00000366862 PKHD1P08F94 4074 aa4.7□□□□□ -1.66
FBXO28-201ENST00000366862 KMT2CQ8NEZ4 4911 aaKnown RBP4.7□□□□□ -1.66
FBXO28-201ENST00000366862 LOC100996750A0A140TA64 210 aa4.69□□□□□ -1.66
FBXO28-201ENST00000366862 TNXBP22105 4242 aa4.69□□□□□ -1.66
FBXO28-201ENST00000366862 LPAP08519 4548 aa4.67□□□□□ -1.66
FBXO28-201ENST00000366862 HYDINQ4G0P3 5121 aa4.63□□□□□ -1.67
FBXO28-201ENST00000366862 KRTAP19-7Q3SYF9 63 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms