RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 ZNF469Q96JG9 3925 aaPredicted RBP4.88□□□□□ -1.63
CDC42BPA-205ENST00000366769 KRTAP12-3P60328 96 aa4.82□□□□□ -1.64
CDC42BPA-205ENST00000366769 CSMD2Q7Z408 3487 aa4.78□□□□□ -1.64
CDC42BPA-205ENST00000366769 LCE3AQ5TA76 89 aa4.75□□□□□ -1.65
CDC42BPA-205ENST00000366769 KRTAP23-1A1A580 65 aa4.74□□□□□ -1.65
CDC42BPA-205ENST00000366769 LORP23490 312 aaPredicted RBP4.7□□□□□ -1.66
CDC42BPA-205ENST00000366769 KRTAP8-1Q8IUC2 63 aa4.65□□□□□ -1.67
CDC42BPA-205ENST00000366769 KMT2AQ03164 3969 aa4.6□□□□□ -1.67
CDC42BPA-205ENST00000366769 DNAH2Q9P225 4427 aa4.57□□□□□ -1.68
CDC42BPA-205ENST00000366769 DNAH6Q9C0G6 4158 aa4.49□□□□□ -1.69
CDC42BPA-205ENST00000366769 MT1HL1P0DM35 61 aa4.49□□□□□ -1.69
CDC42BPA-205ENST00000366769 KRTAP4-5Q9BYR2 181 aa4.44□□□□□ -1.7
CDC42BPA-205ENST00000366769 VPS13BQ7Z7G8 4022 aa4.42□□□□□ -1.7
CDC42BPA-205ENST00000366769 KRTAP10-7P60409 375 aaPredicted RBP4.36□□□□□ -1.71
CDC42BPA-205ENST00000366769 SPRR2FQ96RM1 72 aa4.31□□□□□ -1.72
CDC42BPA-205ENST00000366769 DNAH1Q9P2D7 4330 aa4.3□□□□□ -1.72
CDC42BPA-205ENST00000366769 KRTAP10-4P60372 401 aaPredicted RBP4.26□□□□□ -1.73
CDC42BPA-205ENST00000366769 FRAS1Q86XX4 4008 aa4.25□□□□□ -1.73
CDC42BPA-205ENST00000366769 KRTAP19-5Q3LI72 72 aa4.19□□□□□ -1.74
CDC42BPA-205ENST00000366769 LCE3CQ5T5A8 94 aa4.19□□□□□ -1.74
CDC42BPA-205ENST00000366769 HUWE1Q7Z6Z7 4374 aaKnown RBP4.18□□□□□ -1.74
CDC42BPA-205ENST00000366769 FLGP20930 4061 aaPredicted RBP4.17□□□□□ -1.74
CDC42BPA-205ENST00000366769 DNAH10Q8IVF4 4471 aa4.16□□□□□ -1.74
CDC42BPA-205ENST00000366769 DNAH17Q9UFH2 4485 aa4.14□□□□□ -1.75
CDC42BPA-205ENST00000366769 LCE3BQ5TA77 95 aa4.14□□□□□ -1.75
CDC42BPA-205ENST00000366769 ANK3Q12955 4377 aaKnown RBP4.12□□□□□ -1.75
CDC42BPA-205ENST00000366769 PRKDCP78527 4128 aaKnown RBP4.1□□□□□ -1.75
CDC42BPA-205ENST00000366769 SPRR5A0A1B0GTR4 108 aa4.09□□□□□ -1.75
CDC42BPA-205ENST00000366769 PKHD1P08F94 4074 aa4.08□□□□□ -1.76
CDC42BPA-205ENST00000366769 KRTAP4-1Q9BYQ7 146 aa4.06□□□□□ -1.76
CDC42BPA-205ENST00000366769 SPRR2EP22531 72 aa4.05□□□□□ -1.76
CDC42BPA-205ENST00000366769 SPRR2BP35325 72 aa4.05□□□□□ -1.76
CDC42BPA-205ENST00000366769 SPRR2AP35326 72 aa4.05□□□□□ -1.76
CDC42BPA-205ENST00000366769 KRTAP12-4P60329 112 aa4.05□□□□□ -1.76
CDC42BPA-205ENST00000366769 MT1HP80294 61 aa4.01□□□□□ -1.77
CDC42BPA-205ENST00000366769 MT2AP02795 61 aa3.99□□□□□ -1.77
CDC42BPA-205ENST00000366769 DNAH11Q96DT5 4516 aa3.98□□□□□ -1.77
CDC42BPA-205ENST00000366769 VPS13DQ5THJ4 4388 aa3.96□□□□□ -1.78
CDC42BPA-205ENST00000366769 SPRR2GQ9BYE4 73 aa3.92□□□□□ -1.78
CDC42BPA-205ENST00000366769 MT1FP04733 61 aa3.91□□□□□ -1.78
CDC42BPA-205ENST00000366769 SPRR2DP22532 72 aa3.91□□□□□ -1.78
CDC42BPA-205ENST00000366769 DYNC2H1Q8NCM8 4307 aaKnown RBP3.9□□□□□ -1.78
CDC42BPA-205ENST00000366769 MT1GP13640 62 aa3.88□□□□□ -1.79
CDC42BPA-205ENST00000366769 LCE2BO14633 110 aa3.85□□□□□ -1.79
CDC42BPA-205ENST00000366769 PKHD1L1Q86WI1 4243 aa3.82□□□□□ -1.8
CDC42BPA-205ENST00000366769 PKD1P98161 4303 aa3.77□□□□□ -1.81
CDC42BPA-205ENST00000366769 STARD9Q9P2P6 4700 aa3.76□□□□□ -1.81
CDC42BPA-205ENST00000366769 DNAH8Q96JB1 4490 aa3.76□□□□□ -1.81
CDC42BPA-205ENST00000366769 LCE3DQ9BYE3 92 aa3.75□□□□□ -1.81
CDC42BPA-205ENST00000366769 MT1XP80297 61 aa3.74□□□□□ -1.81
CDC42BPA-205ENST00000366769 LCE3EQ5T5B0 92 aa3.7□□□□□ -1.82
CDC42BPA-205ENST00000366769 PRM1P04553 51 aa3.7□□□□□ -1.82
CDC42BPA-205ENST00000366769 HSPG2P98160 4391 aa3.7□□□□□ -1.82
CDC42BPA-205ENST00000366769 LRP1Q07954 4544 aaKnown RBP3.7□□□□□ -1.82
CDC42BPA-205ENST00000366769 LCE2CQ5TA81 110 aa3.7□□□□□ -1.82
CDC42BPA-205ENST00000366769 DNAH9Q9NYC9 4486 aa3.7□□□□□ -1.82
CDC42BPA-205ENST00000366769 FAT2Q9NYQ8 4349 aa3.7□□□□□ -1.82
CDC42BPA-205ENST00000366769 KRTAP19-4Q3LI73 84 aa3.68□□□□□ -1.82
CDC42BPA-205ENST00000366769 LCE2DQ5TA82 110 aaPredicted RBP3.64□□□□□ -1.83
CDC42BPA-205ENST00000366769 KRTAP4-7Q9BYR0 210 aa3.62□□□□□ -1.83
CDC42BPA-205ENST00000366769 DYNC1H1Q14204 4646 aaKnown RBP3.62□□□□□ -1.83
CDC42BPA-205ENST00000366769 MT4P47944 62 aa3.61□□□□□ -1.83
CDC42BPA-205ENST00000366769 KRTAP19-1Q8IUB9 90 aa3.61□□□□□ -1.83
CDC42BPA-205ENST00000366769 LCE1BQ5T7P3 118 aa3.59□□□□□ -1.83
CDC42BPA-205ENST00000366769 KRTAP4-8A0A0G2JLE6 195 aa3.57□□□□□ -1.84
CDC42BPA-205ENST00000366769 KRTAP4-8Q9BYQ9 185 aa3.57□□□□□ -1.84
CDC42BPA-205ENST00000366769 FAT1Q14517 4588 aa3.56□□□□□ -1.84
CDC42BPA-205ENST00000366769 PLECQ15149 4684 aaKnown RBP3.56□□□□□ -1.84
CDC42BPA-205ENST00000366769 DNAH5Q8TE73 4624 aa3.54□□□□□ -1.84
CDC42BPA-205ENST00000366769 LCE1DQ5T752 114 aa3.53□□□□□ -1.84
CDC42BPA-205ENST00000366769 TNXBP22105 4242 aa3.51□□□□□ -1.85
CDC42BPA-205ENST00000366769 KRTAP19-8Q3LI54 63 aa3.5□□□□□ -1.85
CDC42BPA-205ENST00000366769 LOC100996750A0A140TA64 210 aa3.5□□□□□ -1.85
CDC42BPA-205ENST00000366769 MT1BP07438 61 aa3.44□□□□□ -1.86
CDC42BPA-205ENST00000366769 RYR1P21817 5038 aa3.43□□□□□ -1.86
CDC42BPA-205ENST00000366769 LRP1BQ9NZR2 4599 aa3.43□□□□□ -1.86
CDC42BPA-205ENST00000366769 KRTAP4-9Q9BYQ8 210 aa3.43□□□□□ -1.86
CDC42BPA-205ENST00000366769 MT1LQ93083 61 aa3.42□□□□□ -1.86
CDC42BPA-205ENST00000366769 KRTAP2-3P0C7H8 128 aa3.41□□□□□ -1.86
CDC42BPA-205ENST00000366769 KRTAP2-4Q9BYR9 128 aa3.41□□□□□ -1.86
CDC42BPA-205ENST00000366769 KRTAP2-1Q9BYU5 128 aa3.41□□□□□ -1.86
CDC42BPA-205ENST00000366769 MUC17Q685J3 4493 aa3.4□□□□□ -1.86
CDC42BPA-205ENST00000366769 KRTAP19-3Q7Z4W3 81 aa3.4□□□□□ -1.86
CDC42BPA-205ENST00000366769 APOBP04114 4563 aaKnown RBP3.4□□□□□ -1.87
CDC42BPA-205ENST00000366769 MYCBP2O75592 4640 aa3.39□□□□□ -1.87
CDC42BPA-205ENST00000366769 MT3P25713 68 aa3.36□□□□□ -1.87
CDC42BPA-205ENST00000366769 KRTAP17-1Q9BYP8 105 aa3.35□□□□□ -1.87
CDC42BPA-205ENST00000366769 LCE5AQ5TCM9 118 aa3.35□□□□□ -1.87
CDC42BPA-205ENST00000366769 FAT3Q8TDW7 4589 aa3.34□□□□□ -1.88
CDC42BPA-205ENST00000366769 SACSQ9NZJ4 4579 aa3.33□□□□□ -1.88
CDC42BPA-205ENST00000366769 KRTAP4-3Q9BYR4 195 aa3.31□□□□□ -1.88
CDC42BPA-205ENST00000366769 KRTAP9-8Q9BYQ0 159 aa3.29□□□□□ -1.88
CDC42BPA-205ENST00000366769 MT1EP04732 61 aa3.28□□□□□ -1.89
CDC42BPA-205ENST00000366769 KRTAP9-7A8MTY7 169 aa3.27□□□□□ -1.89
CDC42BPA-205ENST00000366769 KRTAP9-3Q9BYQ3 159 aa3.25□□□□□ -1.89
CDC42BPA-205ENST00000366769 LCE1CQ5T751 118 aa3.25□□□□□ -1.89
CDC42BPA-205ENST00000366769 LCE1EQ5T753 118 aa3.25□□□□□ -1.89
CDC42BPA-205ENST00000366769 LCE1FQ5T754 118 aa3.25□□□□□ -1.89
CDC42BPA-205ENST00000366769 LCE1AQ5T7P2 110 aa3.25□□□□□ -1.89
CDC42BPA-205ENST00000366769 RYR3Q15413 4870 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms