RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 COL12A1Q99715 3063 aa0.53□□□□□ -2.32
RNU4-42P-201ENST00000364738 MTORP42345 2549 aa0.53□□□□□ -2.32
RNU4-42P-201ENST00000364738 TLN2Q9Y4G6 2542 aa0.53□□□□□ -2.32
RNU4-42P-201ENST00000364738 EP400Q96L91 3159 aa0.53□□□□□ -2.32
RNU4-42P-201ENST00000364738 MXRA5Q9NR99 2828 aa0.53□□□□□ -2.32
RNU4-42P-201ENST00000364738 DMXL2Q8TDJ6 3036 aa0.53□□□□□ -2.33
RNU4-42P-201ENST00000364738 SPTAN1Q13813 2472 aaKnown RBP0.53□□□□□ -2.33
RNU4-42P-201ENST00000364738 SZT2Q5T011 3432 aa0.52□□□□□ -2.33
RNU4-42P-201ENST00000364738 NOTCH1P46531 2555 aa0.52□□□□□ -2.33
RNU4-42P-201ENST00000364738 MYO18BQ8IUG5 2567 aa0.52□□□□□ -2.33
RNU4-42P-201ENST00000364738 UNC79Q9P2D8 2635 aa0.52□□□□□ -2.33
RNU4-42P-201ENST00000364738 NSD1Q96L73 2696 aaPredicted RBP0.52□□□□□ -2.33
RNU4-42P-201ENST00000364738 LAMA1P25391 3075 aa0.52□□□□□ -2.33
RNU4-42P-201ENST00000364738 ZANQ9Y493 2812 aa0.52□□□□□ -2.33
RNU4-42P-201ENST00000364738 VPS13DQ5THJ4 4388 aa0.52□□□□□ -2.33
RNU4-42P-201ENST00000364738 FREM2Q5SZK8 3169 aa0.52□□□□□ -2.33
RNU4-42P-201ENST00000364738 DCHS1Q96JQ0 3298 aa0.52□□□□□ -2.33
RNU4-42P-201ENST00000364738 TENM3Q9P273 2699 aa0.51□□□□□ -2.33
RNU4-42P-201ENST00000364738 HIVEP1P15822 2718 aa0.51□□□□□ -2.33
RNU4-42P-201ENST00000364738 NBEAL2Q6ZNJ1 2754 aa0.51□□□□□ -2.33
RNU4-42P-201ENST00000364738 CENPFP49454 3210 aa0.51□□□□□ -2.33
RNU4-42P-201ENST00000364738 SPEGQ15772 3267 aa0.51□□□□□ -2.33
RNU4-42P-201ENST00000364738 PKD1L1Q8TDX9 2849 aa0.51□□□□□ -2.33
RNU4-42P-201ENST00000364738 PCNTO95613 3336 aa0.51□□□□□ -2.33
RNU4-42P-201ENST00000364738 CEP295Q9C0D2 2601 aa0.51□□□□□ -2.33
RNU4-42P-201ENST00000364738 STAB1Q9NY15 2570 aa0.51□□□□□ -2.33
RNU4-42P-201ENST00000364738 MYO9AB2RTY4 2548 aa0.5□□□□□ -2.33
RNU4-42P-201ENST00000364738 ZFYVE26Q68DK2 2539 aa0.5□□□□□ -2.33
RNU4-42P-201ENST00000364738 FBN2P35556 2912 aa0.5□□□□□ -2.33
RNU4-42P-201ENST00000364738 STAB2Q8WWQ8 2551 aa0.5□□□□□ -2.33
RNU4-42P-201ENST00000364738 ACACBO00763 2458 aa0.5□□□□□ -2.33
RNU4-42P-201ENST00000364738 FLNAP21333 2647 aaKnown RBP0.5□□□□□ -2.33
RNU4-42P-201ENST00000364738 FASNP49327 2511 aaKnown RBP0.49□□□□□ -2.33
RNU4-42P-201ENST00000364738 LAMA2P24043 3122 aaKnown RBP0.49□□□□□ -2.33
RNU4-42P-201ENST00000364738 LAMA3Q16787 3333 aa0.49□□□□□ -2.33
RNU4-42P-201ENST00000364738 SMR3BP02814 79 aaPredicted RBP0.49□□□□□ -2.33
RNU4-42P-201ENST00000364738 DMDP11532 3685 aa0.49□□□□□ -2.33
RNU4-42P-201ENST00000364738 XIRP2A4UGR9 3374 aa0.49□□□□□ -2.33
RNU4-42P-201ENST00000364738 NBPF19A0A087WUL8 3843 aa0.49□□□□□ -2.33
RNU4-42P-201ENST00000364738 HRNRQ86YZ3 2850 aaPredicted RBP0.48□□□□□ -2.33
RNU4-42P-201ENST00000364738 SPTBN5Q9NRC6 3674 aaKnown RBP0.48□□□□□ -2.33
RNU4-42P-201ENST00000364738 PRM1P04553 51 aa0.48□□□□□ -2.33
RNU4-42P-201ENST00000364738 LOC400499M0QZD8 3231 aa0.48□□□□□ -2.33
RNU4-42P-201ENST00000364738 AKAP9Q99996 3911 aa0.48□□□□□ -2.33
RNU4-42P-201ENST00000364738 CSMD1Q96PZ7 3565 aa0.47□□□□□ -2.33
RNU4-42P-201ENST00000364738 VCANP13611 3396 aa0.47□□□□□ -2.33
RNU4-42P-201ENST00000364738 MUC3AQ02505 3323 aa0.47□□□□□ -2.33
RNU4-42P-201ENST00000364738 UNC80Q8N2C7 3258 aa0.47□□□□□ -2.33
RNU4-42P-201ENST00000364738 USP34Q70CQ2 3546 aa0.47□□□□□ -2.33
RNU4-42P-201ENST00000364738 MT1AP04731 61 aa0.47□□□□□ -2.33
RNU4-42P-201ENST00000364738 MGAM2Q2M2H8 2515 aa0.47□□□□□ -2.33
RNU4-42P-201ENST00000364738 SPENQ96T58 3664 aaKnown RBP0.47□□□□□ -2.33
RNU4-42P-201ENST00000364738 ASPMQ8IZT6 3477 aa0.46□□□□□ -2.34
RNU4-42P-201ENST00000364738 LAMA5O15230 3695 aa0.46□□□□□ -2.34
RNU4-42P-201ENST00000364738 FLNBO75369 2602 aaKnown RBP0.46□□□□□ -2.34
RNU4-42P-201ENST00000364738 AHNAKQ09666 5890 aaKnown RBP0.46□□□□□ -2.34
RNU4-42P-201ENST00000364738 KRTAP19-5Q3LI72 72 aa0.46□□□□□ -2.34
RNU4-42P-201ENST00000364738 CSMD3Q7Z407 3707 aa0.46□□□□□ -2.34
RNU4-42P-201ENST00000364738 BRCA2P51587 3418 aa0.45□□□□□ -2.34
RNU4-42P-201ENST00000364738 IGSF10Q6WRI0 2623 aa0.45□□□□□ -2.34
RNU4-42P-201ENST00000364738 SMG1Q96Q15 3661 aaKnown RBP0.45□□□□□ -2.34
RNU4-42P-201ENST00000364738 CSMD2Q7Z408 3487 aa0.45□□□□□ -2.34
RNU4-42P-201ENST00000364738 ADGRG4Q8IZF6 3080 aa0.44□□□□□ -2.34
RNU4-42P-201ENST00000364738 SVEP1Q4LDE5 3571 aa0.44□□□□□ -2.34
RNU4-42P-201ENST00000364738 WDFY3Q8IZQ1 3526 aa0.43□□□□□ -2.34
RNU4-42P-201ENST00000364738 MAST4O15021 2626 aa0.43□□□□□ -2.34
RNU4-42P-201ENST00000364738 DNAH14Q0VDD8 3507 aa0.43□□□□□ -2.34
RNU4-42P-201ENST00000364738 SPRR2BP35325 72 aa0.43□□□□□ -2.34
RNU4-42P-201ENST00000364738 SPRR2GQ9BYE4 73 aa0.43□□□□□ -2.34
RNU4-42P-201ENST00000364738 DNAH11Q96DT5 4516 aa0.43□□□□□ -2.34
RNU4-42P-201ENST00000364738 DNAH8Q96JB1 4490 aa0.43□□□□□ -2.34
RNU4-42P-201ENST00000364738 MYCBP2O75592 4640 aa0.43□□□□□ -2.34
RNU4-42P-201ENST00000364738 MYO15AQ9UKN7 3530 aa0.43□□□□□ -2.34
RNU4-42P-201ENST00000364738 TNXBP22105 4242 aa0.43□□□□□ -2.34
RNU4-42P-201ENST00000364738 MT1EP04732 61 aa0.42□□□□□ -2.34
RNU4-42P-201ENST00000364738 SPRR2DP22532 72 aa0.42□□□□□ -2.34
RNU4-42P-201ENST00000364738 SPRR2AP35326 72 aa0.42□□□□□ -2.34
RNU4-42P-201ENST00000364738 DYNC2H1Q8NCM8 4307 aaKnown RBP0.42□□□□□ -2.34
RNU4-42P-201ENST00000364738 EYSQ5T1H1 3165 aa0.42□□□□□ -2.34
RNU4-42P-201ENST00000364738 KMT2AQ03164 3969 aa0.41□□□□□ -2.34
RNU4-42P-201ENST00000364738 LYSTQ99698 3801 aa0.41□□□□□ -2.34
RNU4-42P-201ENST00000364738 MUC5BQ9HC84 5762 aaPredicted RBP0.41□□□□□ -2.34
RNU4-42P-201ENST00000364738 CUBNO60494 3623 aa0.41□□□□□ -2.34
RNU4-42P-201ENST00000364738 SACSQ9NZJ4 4579 aa0.41□□□□□ -2.34
RNU4-42P-201ENST00000364738 KRTAP6-2Q3LI66 62 aa0.4□□□□□ -2.35
RNU4-42P-201ENST00000364738 KRTAP19-3Q7Z4W3 81 aa0.4□□□□□ -2.35
RNU4-42P-201ENST00000364738 MT1LQ93083 61 aa0.4□□□□□ -2.35
RNU4-42P-201ENST00000364738 SPRR2FQ96RM1 72 aa0.4□□□□□ -2.35
RNU4-42P-201ENST00000364738 HUWE1Q7Z6Z7 4374 aaKnown RBP0.4□□□□□ -2.35
RNU4-42P-201ENST00000364738 VPS13BQ7Z7G8 4022 aa0.4□□□□□ -2.35
RNU4-42P-201ENST00000364738 CMYA5Q8N3K9 4069 aa0.39□□□□□ -2.35
RNU4-42P-201ENST00000364738 DNAH3Q8TD57 4116 aa0.39□□□□□ -2.35
RNU4-42P-201ENST00000364738 FLGP20930 4061 aaPredicted RBP0.39□□□□□ -2.35
RNU4-42P-201ENST00000364738 BSNQ9UPA5 3926 aa0.39□□□□□ -2.35
RNU4-42P-201ENST00000364738 CDH23Q9H251 3354 aa0.39□□□□□ -2.35
RNU4-42P-201ENST00000364738 FRAS1Q86XX4 4008 aa0.38□□□□□ -2.35
RNU4-42P-201ENST00000364738 SPRR2EP22531 72 aa0.38□□□□□ -2.35
RNU4-42P-201ENST00000364738 MT1HP80294 61 aa0.38□□□□□ -2.35
RNU4-42P-201ENST00000364738 KRTAP19-8Q3LI54 63 aa0.38□□□□□ -2.35
RNU4-42P-201ENST00000364738 DNAH1Q9P2D7 4330 aa0.38□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms