RNA–Protein interactions for RNA: ENST00000363574.1

RNU6-1339P-201, Transcript of RNA, U6 small nuclear 1339, pseudogene, humanhuman

BASIC

Gene RNU6-1339P, Length 91 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1339P-201ENST00000363574 MAST1Q9Y2H9 1570 aa-1.23□□□□□ -2.61
RNU6-1339P-201ENST00000363574 SPENQ96T58 3664 aaKnown RBP-1.23□□□□□ -2.61
RNU6-1339P-201ENST00000363574 LINC00308Q8TCZ7 52 aa-1.24□□□□□ -2.61
RNU6-1339P-201ENST00000363574 ALS2Q96Q42 1657 aa-1.24□□□□□ -2.61
RNU6-1339P-201ENST00000363574 SMR3BP02814 79 aaPredicted RBP-1.25□□□□□ -2.61
RNU6-1339P-201ENST00000363574 KRTAP8-1Q8IUC2 63 aa-1.26□□□□□ -2.61
RNU6-1339P-201ENST00000363574 TLN2Q9Y4G6 2542 aa-1.26□□□□□ -2.61
RNU6-1339P-201ENST00000363574 M0QY20 66 aa-1.27□□□□□ -2.61
RNU6-1339P-201ENST00000363574 RELNP78509 3460 aa-1.27□□□□□ -2.61
RNU6-1339P-201ENST00000363574 COL12A1Q99715 3063 aa-1.28□□□□□ -2.61
RNU6-1339P-201ENST00000363574 PLECQ15149 4684 aaKnown RBP-1.28□□□□□ -2.61
RNU6-1339P-201ENST00000363574 ABCA10Q8WWZ4 1543 aa-1.28□□□□□ -2.61
RNU6-1339P-201ENST00000363574 ABRACLQ9P1F3 81 aa-1.28□□□□□ -2.61
RNU6-1339P-201ENST00000363574 UGGT1Q9NYU2 1555 aa-1.29□□□□□ -2.62
RNU6-1339P-201ENST00000363574 S100ZQ8WXG8 99 aa-1.29□□□□□ -2.62
RNU6-1339P-201ENST00000363574 KAAG1Q9UBP8 84 aa-1.29□□□□□ -2.62
RNU6-1339P-201ENST00000363574 A0A1B0GUL6 1792 aa-1.29□□□□□ -2.62
RNU6-1339P-201ENST00000363574 NIPBLQ6KC79 2804 aaeCLIP-1.3□□□□□ -2.62
RNU6-1339P-201ENST00000363574 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.31□□□□□ -2.62
RNU6-1339P-201ENST00000363574 CPS1P31327 1500 aa-1.32□□□□□ -2.62
RNU6-1339P-201ENST00000363574 SPTBN5Q9NRC6 3674 aaKnown RBP-1.33□□□□□ -2.62
RNU6-1339P-201ENST00000363574 USP9XQ93008 2570 aaPredicted RBP-1.33□□□□□ -2.62
RNU6-1339P-201ENST00000363574 M0QZ58 72 aa-1.34□□□□□ -2.62
RNU6-1339P-201ENST00000363574 SMIM27A0A1W2PRY6 76 aa-1.35□□□□□ -2.63
RNU6-1339P-201ENST00000363574 EFCAB6Q5THR3 1501 aa-1.35□□□□□ -2.63
RNU6-1339P-201ENST00000363574 SMIM31A0A1B0GVY4 71 aa-1.36□□□□□ -2.63
RNU6-1339P-201ENST00000363574 A8MTW9 85 aa-1.36□□□□□ -2.63
RNU6-1339P-201ENST00000363574 SMIM5Q71RC9 77 aa-1.36□□□□□ -2.63
RNU6-1339P-201ENST00000363574 FAM208AQ9UK61 1670 aaKnown RBP-1.36□□□□□ -2.63
RNU6-1339P-201ENST00000363574 LAMA3Q16787 3333 aa-1.38□□□□□ -2.63
RNU6-1339P-201ENST00000363574 FRYQ5TBA9 3013 aa-1.38□□□□□ -2.63
RNU6-1339P-201ENST00000363574 H0YGX0 51 aa-1.38□□□□□ -2.63
RNU6-1339P-201ENST00000363574 C5orf42Q9H799 3197 aa-1.4□□□□□ -2.63
RNU6-1339P-201ENST00000363574 WFDC10BQ8IUB3 73 aa-1.4□□□□□ -2.63
RNU6-1339P-201ENST00000363574 PRXQ9BXM0 1461 aa-1.41□□□□□ -2.63
RNU6-1339P-201ENST00000363574 TEX15Q9BXT5 2789 aa-1.41□□□□□ -2.64
RNU6-1339P-201ENST00000363574 KIF21BO75037 1637 aa-1.41□□□□□ -2.64
RNU6-1339P-201ENST00000363574 ITPR1Q14643 2758 aa-1.42□□□□□ -2.64
RNU6-1339P-201ENST00000363574 CMYA5Q8N3K9 4069 aa-1.44□□□□□ -2.64
RNU6-1339P-201ENST00000363574 PREX2Q70Z35 1606 aa-1.44□□□□□ -2.64
RNU6-1339P-201ENST00000363574 AGLP35573 1532 aa-1.45□□□□□ -2.64
RNU6-1339P-201ENST00000363574 KRTAP19-6Q3LI70 58 aa-1.45□□□□□ -2.64
RNU6-1339P-201ENST00000363574 LMO7Q8WWI1 1683 aa-1.48□□□□□ -2.65
RNU6-1339P-201ENST00000363574 MT1XP80297 61 aa-1.49□□□□□ -2.65
RNU6-1339P-201ENST00000363574 DNAH7Q8WXX0 4024 aa-1.49□□□□□ -2.65
RNU6-1339P-201ENST00000363574 MT1EP04732 61 aa-1.51□□□□□ -2.65
RNU6-1339P-201ENST00000363574 DYNC1H1Q14204 4646 aaKnown RBP-1.51□□□□□ -2.65
RNU6-1339P-201ENST00000363574 SRCAPQ6ZRS2 3230 aa-1.53□□□□□ -2.65
RNU6-1339P-201ENST00000363574 LINC01546A6NGU7 62 aa-1.55□□□□□ -2.66
RNU6-1339P-201ENST00000363574 SPART-AS1P0CW21 52 aa-1.56□□□□□ -2.66
RNU6-1339P-201ENST00000363574 PLNP26678 52 aa-1.56□□□□□ -2.66
RNU6-1339P-201ENST00000363574 ERICH3Q5RHP9 1530 aa-1.56□□□□□ -2.66
RNU6-1339P-201ENST00000363574 SYCP2Q9BX26 1530 aa-1.56□□□□□ -2.66
RNU6-1339P-201ENST00000363574 SPTAN1Q13813 2472 aaKnown RBP-1.57□□□□□ -2.66
RNU6-1339P-201ENST00000363574 ADGRG4Q8IZF6 3080 aa-1.57□□□□□ -2.66
RNU6-1339P-201ENST00000363574 MYO15AQ9UKN7 3530 aa-1.58□□□□□ -2.66
RNU6-1339P-201ENST00000363574 MROH2AA6NES4 1674 aa-1.58□□□□□ -2.66
RNU6-1339P-201ENST00000363574 DNAH10Q8IVF4 4471 aa-1.59□□□□□ -2.66
RNU6-1339P-201ENST00000363574 TFF3Q07654 80 aa-1.59□□□□□ -2.66
RNU6-1339P-201ENST00000363574 ABCA5Q8WWZ7 1642 aa-1.59□□□□□ -2.66
RNU6-1339P-201ENST00000363574 DEFB131AP59861 70 aa-1.6□□□□□ -2.67
RNU6-1339P-201ENST00000363574 DNAH17Q9UFH2 4485 aa-1.6□□□□□ -2.67
RNU6-1339P-201ENST00000363574 MGAQ8IWI9 3026 aa-1.6□□□□□ -2.67
RNU6-1339P-201ENST00000363574 ADCY10Q96PN6 1610 aa-1.61□□□□□ -2.67
RNU6-1339P-201ENST00000363574 MT1LQ93083 61 aa-1.61□□□□□ -2.67
RNU6-1339P-201ENST00000363574 CSMD1Q96PZ7 3565 aa-1.62□□□□□ -2.67
RNU6-1339P-201ENST00000363574 LRBAP50851 2863 aa-1.63□□□□□ -2.67
RNU6-1339P-201ENST00000363574 ITPR2Q14571 2701 aa-1.63□□□□□ -2.67
RNU6-1339P-201ENST00000363574 CHD7Q9P2D1 2997 aa-1.63□□□□□ -2.67
RNU6-1339P-201ENST00000363574 NRXN3Q9Y4C0 1643 aa-1.65□□□□□ -2.67
RNU6-1339P-201ENST00000363574 ABCC8Q09428 1581 aa-1.68□□□□□ -2.68
RNU6-1339P-201ENST00000363574 MYO9AB2RTY4 2548 aa-1.69□□□□□ -2.68
RNU6-1339P-201ENST00000363574 POLR2KP53803 58 aaKnown RBP-1.69□□□□□ -2.68
RNU6-1339P-201ENST00000363574 CMC2Q9NRP2 79 aa-1.7□□□□□ -2.68
RNU6-1339P-201ENST00000363574 SMIM2Q9BVW6 85 aa-1.71□□□□□ -2.68
RNU6-1339P-201ENST00000363574 IQGAP1P46940 1657 aa-1.71□□□□□ -2.68
RNU6-1339P-201ENST00000363574 DDX60Q8IY21 1712 aaKnown RBP-1.73□□□□□ -2.69
RNU6-1339P-201ENST00000363574 FANCD2Q9BXW9 1451 aa-1.75□□□□□ -2.69
RNU6-1339P-201ENST00000363574 TRRAPQ9Y4A5 3859 aa-1.76□□□□□ -2.69
RNU6-1339P-201ENST00000363574 EYSQ5T1H1 3165 aa-1.77□□□□□ -2.69
RNU6-1339P-201ENST00000363574 DMXL2Q8TDJ6 3036 aa-1.78□□□□□ -2.69
RNU6-1339P-201ENST00000363574 NFAT5O94916 1531 aa-1.79□□□□□ -2.7
RNU6-1339P-201ENST00000363574 DNAH5Q8TE73 4624 aa-1.79□□□□□ -2.7
RNU6-1339P-201ENST00000363574 MT1HL1P0DM35 61 aa-1.82□□□□□ -2.7
RNU6-1339P-201ENST00000363574 CFAP46Q8IYW2 2715 aa-1.82□□□□□ -2.7
RNU6-1339P-201ENST00000363574 TRPM2O94759 1503 aa-1.84□□□□□ -2.7
RNU6-1339P-201ENST00000363574 MT1GP13640 62 aa-1.84□□□□□ -2.7
RNU6-1339P-201ENST00000363574 ZFHX4Q86UP3 3567 aa-1.84□□□□□ -2.7
RNU6-1339P-201ENST00000363574 LEAP2Q969E1 77 aa-1.85□□□□□ -2.71
RNU6-1339P-201ENST00000363574 CLTCL1P53675 1640 aa-1.86□□□□□ -2.71
RNU6-1339P-201ENST00000363574 CEP295Q9C0D2 2601 aa-1.88□□□□□ -2.71
RNU6-1339P-201ENST00000363574 SMG1Q96Q15 3661 aaKnown RBP-1.89□□□□□ -2.71
RNU6-1339P-201ENST00000363574 MT1BP07438 61 aa-1.92□□□□□ -2.72
RNU6-1339P-201ENST00000363574 CSMD2Q7Z408 3487 aa-1.93□□□□□ -2.72
RNU6-1339P-201ENST00000363574 NDUFA1O15239 70 aa-1.94□□□□□ -2.72
RNU6-1339P-201ENST00000363574 CRYBG3Q68DQ2 2970 aa-1.95□□□□□ -2.72
RNU6-1339P-201ENST00000363574 MT1MQ8N339 61 aa-1.96□□□□□ -2.72
RNU6-1339P-201ENST00000363574 DEFB4AO15263 64 aa-1.97□□□□□ -2.72
RNU6-1339P-201ENST00000363574 BOD1L1Q8NFC6 3051 aa-1.98□□□□□ -2.73
RNU6-1339P-201ENST00000363574 MT2AP02795 61 aa-1.98□□□□□ -2.73
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms