RNA–Protein interactions for RNA: ENST00000362942.1

RNU6-428P-201, Transcript of RNA, U6 small nuclear 428, pseudogene, humanhuman

BASIC

Gene RNU6-428P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-428P-201ENST00000362942 GYPAP02724 150 aa-1.39□□□□□ -2.63
RNU6-428P-201ENST00000362942 CCNB3Q8WWL7 1395 aa-1.39□□□□□ -2.63
RNU6-428P-201ENST00000362942 ARHGAP35Q9NRY4 1499 aa-1.39□□□□□ -2.63
RNU6-428P-201ENST00000362942 MED14O60244 1454 aa-1.4□□□□□ -2.63
RNU6-428P-201ENST00000362942 CCDC180Q9P1Z9 1646 aa-1.4□□□□□ -2.63
RNU6-428P-201ENST00000362942 NDUFB1O75438 58 aa-1.41□□□□□ -2.64
RNU6-428P-201ENST00000362942 RPS27P42677 84 aaKnown RBP-1.41□□□□□ -2.64
RNU6-428P-201ENST00000362942 POLR2KP53803 58 aaKnown RBP-1.41□□□□□ -2.64
RNU6-428P-201ENST00000362942 C6orf48Q9UBA6 75 aa-1.41□□□□□ -2.64
RNU6-428P-201ENST00000362942 DDX60LQ5H9U9 1706 aaKnown RBP-1.41□□□□□ -2.64
RNU6-428P-201ENST00000362942 FAM208AQ9UK61 1670 aaKnown RBP-1.42□□□□□ -2.64
RNU6-428P-201ENST00000362942 ITSN1Q15811 1721 aa-1.42□□□□□ -2.64
RNU6-428P-201ENST00000362942 NRAPQ86VF7 1730 aa-1.42□□□□□ -2.64
RNU6-428P-201ENST00000362942 ATP6V1G2-DDX39BF2Z307 99 aa-1.42□□□□□ -2.64
RNU6-428P-201ENST00000362942 MRPL33O75394 65 aaKnown RBP-1.42□□□□□ -2.64
RNU6-428P-201ENST00000362942 RPS27LQ71UM5 84 aaKnown RBP-1.42□□□□□ -2.64
RNU6-428P-201ENST00000362942 RRBP1Q9P2E9 1410 aaKnown RBP-1.42□□□□□ -2.64
RNU6-428P-201ENST00000362942 TJP1Q07157 1748 aa-1.43□□□□□ -2.64
RNU6-428P-201ENST00000362942 C3P01024 1663 aa-1.44□□□□□ -2.64
RNU6-428P-201ENST00000362942 M0R143 59 aa-1.44□□□□□ -2.64
RNU6-428P-201ENST00000362942 C20orf78Q9BR46 151 aa-1.44□□□□□ -2.64
RNU6-428P-201ENST00000362942 RHPN1-AS1Q9BWJ2 59 aa-1.44□□□□□ -2.64
RNU6-428P-201ENST00000362942 KAAG1Q9UBP8 84 aa-1.44□□□□□ -2.64
RNU6-428P-201ENST00000362942 RABAC1Q9UI14 185 aa-1.44□□□□□ -2.64
RNU6-428P-201ENST00000362942 NCMAPQ5T1S8 102 aa-1.45□□□□□ -2.64
RNU6-428P-201ENST00000362942 NCBP2-AS2Q69YL0 99 aa-1.45□□□□□ -2.64
RNU6-428P-201ENST00000362942 AKAP12Q02952 1782 aa-1.46□□□□□ -2.64
RNU6-428P-201ENST00000362942 ANKARQ7Z5J8 1434 aa-1.46□□□□□ -2.64
RNU6-428P-201ENST00000362942 MYMXA0A1B0GTQ4 84 aa-1.46□□□□□ -2.64
RNU6-428P-201ENST00000362942 NHSQ6T4R5 1651 aa-1.46□□□□□ -2.64
RNU6-428P-201ENST00000362942 GLI2P10070 1586 aa-1.47□□□□□ -2.64
RNU6-428P-201ENST00000362942 SCRIBQ14160 1630 aa-1.47□□□□□ -2.64
RNU6-428P-201ENST00000362942 CEP162Q5TB80 1403 aa-1.47□□□□□ -2.64
RNU6-428P-201ENST00000362942 NFAT5O94916 1531 aa-1.48□□□□□ -2.65
RNU6-428P-201ENST00000362942 MADDQ8WXG6 1647 aa-1.48□□□□□ -2.65
RNU6-428P-201ENST00000362942 RNF17Q9BXT8 1623 aaKnown RBP-1.48□□□□□ -2.65
RNU6-428P-201ENST00000362942 HFM1A2PYH4 1435 aa-1.49□□□□□ -2.65
RNU6-428P-201ENST00000362942 DEFB131BA0A096LNP1 70 aa-1.49□□□□□ -2.65
RNU6-428P-201ENST00000362942 SMIM27A0A1W2PRY6 76 aa-1.49□□□□□ -2.65
RNU6-428P-201ENST00000362942 IFI27P40305 119 aaPredicted RBP-1.49□□□□□ -2.65
RNU6-428P-201ENST00000362942 MROH1Q8NDA8 1641 aa-1.49□□□□□ -2.65
RNU6-428P-201ENST00000362942 MYO5CQ9NQX4 1742 aa-1.49□□□□□ -2.65
RNU6-428P-201ENST00000362942 CCDC88BA6NC98 1476 aa-1.5□□□□□ -2.65
RNU6-428P-201ENST00000362942 MROH2AA6NES4 1674 aa-1.5□□□□□ -2.65
RNU6-428P-201ENST00000362942 A0A096LNI7 61 aa-1.5□□□□□ -2.65
RNU6-428P-201ENST00000362942 WFDC10BQ8IUB3 73 aa-1.5□□□□□ -2.65
RNU6-428P-201ENST00000362942 URB2Q14146 1524 aaKnown RBP-1.5□□□□□ -2.65
RNU6-428P-201ENST00000362942 PEG3Q9GZU2 1588 aa-1.51□□□□□ -2.65
RNU6-428P-201ENST00000362942 DIP2BQ9P265 1576 aa-1.51□□□□□ -2.65
RNU6-428P-201ENST00000362942 CFAP43Q8NDM7 1665 aa-1.51□□□□□ -2.65
RNU6-428P-201ENST00000362942 CEBPZOSA8MTT3 80 aa-1.51□□□□□ -2.65
RNU6-428P-201ENST00000362942 NDUFA4O00483 81 aa-1.51□□□□□ -2.65
RNU6-428P-201ENST00000362942 SNRPFP62306 86 aaKnown RBP-1.51□□□□□ -2.65
RNU6-428P-201ENST00000362942 UBL5Q9BZL1 73 aa-1.51□□□□□ -2.65
RNU6-428P-201ENST00000362942 NMES1Q9C002 83 aa-1.51□□□□□ -2.65
RNU6-428P-201ENST00000362942 LINC01556Q5JQF7 62 aa-1.52□□□□□ -2.65
RNU6-428P-201ENST00000362942 SMIM2Q9BVW6 85 aa-1.52□□□□□ -2.65
RNU6-428P-201ENST00000362942 DUOX2Q9NRD8 1548 aa-1.52□□□□□ -2.65
RNU6-428P-201ENST00000362942 ARFGEF2Q9Y6D5 1785 aa-1.52□□□□□ -2.65
RNU6-428P-201ENST00000362942 INO80Q9ULG1 1556 aaPredicted RBP-1.53□□□□□ -2.65
RNU6-428P-201ENST00000362942 ALS2Q96Q42 1657 aa-1.54□□□□□ -2.66
RNU6-428P-201ENST00000362942 DIP2AQ14689 1571 aa-1.54□□□□□ -2.66
RNU6-428P-201ENST00000362942 TTC37Q6PGP7 1564 aa-1.54□□□□□ -2.66
RNU6-428P-201ENST00000362942 PYY3Q5JQD4 70 aa-1.54□□□□□ -2.66
RNU6-428P-201ENST00000362942 LINC00643Q86TS7 51 aa-1.54□□□□□ -2.66
RNU6-428P-201ENST00000362942 DEFB131AP59861 70 aa-1.55□□□□□ -2.66
RNU6-428P-201ENST00000362942 RALGAPBQ86X10 1494 aa-1.56□□□□□ -2.66
RNU6-428P-201ENST00000362942 UMAD1C9J7I0 102 aa-1.56□□□□□ -2.66
RNU6-428P-201ENST00000362942 CRIP1P50238 77 aa-1.56□□□□□ -2.66
RNU6-428P-201ENST00000362942 PKIAP61925 76 aa-1.56□□□□□ -2.66
RNU6-428P-201ENST00000362942 SNHG12Q9BXW3 62 aa-1.56□□□□□ -2.66
RNU6-428P-201ENST00000362942 RB1CC1Q8TDY2 1594 aa-1.56□□□□□ -2.66
RNU6-428P-201ENST00000362942 TDRG1Q3Y452 100 aa-1.57□□□□□ -2.66
RNU6-428P-201ENST00000362942 EIF2AK4Q9P2K8 1649 aaKnown RBP-1.58□□□□□ -2.66
RNU6-428P-201ENST00000362942 ETDCA0A1B0GVM5 59 aa-1.58□□□□□ -2.66
RNU6-428P-201ENST00000362942 DEFB121Q5J5C9 76 aa-1.58□□□□□ -2.66
RNU6-428P-201ENST00000362942 DEFB124Q8NES8 71 aa-1.58□□□□□ -2.66
RNU6-428P-201ENST00000362942 ABCC1P33527 1531 aa-1.58□□□□□ -2.66
RNU6-428P-201ENST00000362942 LMTK2Q8IWU2 1503 aa-1.58□□□□□ -2.66
RNU6-428P-201ENST00000362942 LINC01590Q5TEZ4 76 aa-1.59□□□□□ -2.66
RNU6-428P-201ENST00000362942 ABCC3O15438 1527 aa-1.6□□□□□ -2.67
RNU6-428P-201ENST00000362942 PDCD5O14737 125 aa-1.6□□□□□ -2.67
RNU6-428P-201ENST00000362942 NREPQ16612 68 aa-1.6□□□□□ -2.67
RNU6-428P-201ENST00000362942 S100A16Q96FQ6 103 aaKnown RBP-1.6□□□□□ -2.67
RNU6-428P-201ENST00000362942 KCNQ1DNQ9H478 68 aa-1.6□□□□□ -2.67
RNU6-428P-201ENST00000362942 Q9H521 79 aa-1.6□□□□□ -2.67
RNU6-428P-201ENST00000362942 TRPM2O94759 1503 aa-1.61□□□□□ -2.67
RNU6-428P-201ENST00000362942 PVALEFA0A1B0GWK0 134 aa-1.61□□□□□ -2.67
RNU6-428P-201ENST00000362942 TMEM167BQ9NRX6 74 aa-1.61□□□□□ -2.67
RNU6-428P-201ENST00000362942 TIAM1Q13009 1591 aa-1.61□□□□□ -2.67
RNU6-428P-201ENST00000362942 DDX60Q8IY21 1712 aaKnown RBP-1.61□□□□□ -2.67
RNU6-428P-201ENST00000362942 ABCC6O95255 1503 aa-1.61□□□□□ -2.67
RNU6-428P-201ENST00000362942 H3BUT2 72 aa-1.63□□□□□ -2.67
RNU6-428P-201ENST00000362942 TOMM7Q9P0U1 55 aa-1.63□□□□□ -2.67
RNU6-428P-201ENST00000362942 KDM5DQ9BY66 1539 aa-1.63□□□□□ -2.67
RNU6-428P-201ENST00000362942 EFCAB6Q5THR3 1501 aa-1.64□□□□□ -2.67
RNU6-428P-201ENST00000362942 KANTRA0A1W2PQU2 76 aa-1.64□□□□□ -2.67
RNU6-428P-201ENST00000362942 LINC00308Q8TCZ7 52 aa-1.64□□□□□ -2.67
RNU6-428P-201ENST00000362942 S100ZQ8WXG8 99 aa-1.64□□□□□ -2.67
RNU6-428P-201ENST00000362942 A0A087WXM4 84 aa-1.65□□□□□ -2.67
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms