RNA–Protein interactions for RNA: ENST00000361813.5

SMG5-201, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG5, Length 4,559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-201ENST00000361813 DNAH8Q96JB1 4490 aa8.03□□□□□ -1.12
SMG5-201ENST00000361813 DNAH17Q9UFH2 4485 aa8□□□□□ -1.13
SMG5-201ENST00000361813 PRO2289Q9P1D8 64 aa7.99□□□□□ -1.13
SMG5-201ENST00000361813 LORP23490 312 aaPredicted RBP7.99□□□□□ -1.13
SMG5-201ENST00000361813 VPS13DQ5THJ4 4388 aa7.99□□□□□ -1.13
SMG5-201ENST00000361813 LRP1BQ9NZR2 4599 aa7.96□□□□□ -1.13
SMG5-201ENST00000361813 STARD9Q9P2P6 4700 aa7.95□□□□□ -1.14
SMG5-201ENST00000361813 DNAH2Q9P225 4427 aa7.93□□□□□ -1.14
SMG5-201ENST00000361813 FAT1Q14517 4588 aa7.93□□□□□ -1.14
SMG5-201ENST00000361813 ALMS1Q8TCU4 4167 aa7.89□□□□□ -1.15
SMG5-201ENST00000361813 DNHD1Q96M86 4753 aa7.85□□□□□ -1.15
SMG5-201ENST00000361813 KRTAP4-5Q9BYR2 181 aa7.81□□□□□ -1.16
SMG5-201ENST00000361813 ANK2Q01484 3957 aa7.81□□□□□ -1.16
SMG5-201ENST00000361813 KMT2AQ03164 3969 aa7.76□□□□□ -1.17
SMG5-201ENST00000361813 DYNC1H1Q14204 4646 aaKnown RBP7.75□□□□□ -1.17
SMG5-201ENST00000361813 DNAH3Q8TD57 4116 aa7.73□□□□□ -1.17
SMG5-201ENST00000361813 MYCBP2O75592 4640 aa7.7□□□□□ -1.18
SMG5-201ENST00000361813 LYSTQ99698 3801 aa7.69□□□□□ -1.18
SMG5-201ENST00000361813 FRAS1Q86XX4 4008 aa7.69□□□□□ -1.18
SMG5-201ENST00000361813 PRKDCP78527 4128 aaKnown RBP7.68□□□□□ -1.18
SMG5-201ENST00000361813 VPS13BQ7Z7G8 4022 aa7.63□□□□□ -1.19
SMG5-201ENST00000361813 INE1O15225 51 aa7.62□□□□□ -1.19
SMG5-201ENST00000361813 SACSQ9NZJ4 4579 aa7.61□□□□□ -1.19
SMG5-201ENST00000361813 KRTAP23-1A1A580 65 aa7.6□□□□□ -1.19
SMG5-201ENST00000361813 LCE3AQ5TA76 89 aa7.59□□□□□ -1.19
SMG5-201ENST00000361813 KRTAP10-12P60413 245 aa7.55□□□□□ -1.2
SMG5-201ENST00000361813 DYNC2H1Q8NCM8 4307 aaKnown RBP7.55□□□□□ -1.2
SMG5-201ENST00000361813 KRTAP4-1Q9BYQ7 146 aa7.53□□□□□ -1.2
SMG5-201ENST00000361813 APOBP04114 4563 aaKnown RBP7.52□□□□□ -1.21
SMG5-201ENST00000361813 KRTAP12-3P60328 96 aa7.51□□□□□ -1.21
SMG5-201ENST00000361813 RYR1P21817 5038 aa7.49□□□□□ -1.21
SMG5-201ENST00000361813 DNAH6Q9C0G6 4158 aa7.49□□□□□ -1.21
SMG5-201ENST00000361813 HECTD4Q9Y4D8 3996 aa7.46□□□□□ -1.22
SMG5-201ENST00000361813 DNAH7Q8WXX0 4024 aa7.46□□□□□ -1.22
SMG5-201ENST00000361813 CMYA5Q8N3K9 4069 aa7.43□□□□□ -1.22
SMG5-201ENST00000361813 FAT2Q9NYQ8 4349 aa7.41□□□□□ -1.22
SMG5-201ENST00000361813 LRP1Q07954 4544 aaKnown RBP7.38□□□□□ -1.23
SMG5-201ENST00000361813 FAT3Q8TDW7 4589 aa7.32□□□□□ -1.24
SMG5-201ENST00000361813 KIAA1109Q2LD37 5005 aa7.31□□□□□ -1.24
SMG5-201ENST00000361813 KRTAP17-1Q9BYP8 105 aa7.13□□□□□ -1.27
SMG5-201ENST00000361813 LRP2P98164 4655 aa7.11□□□□□ -1.27
SMG5-201ENST00000361813 SPRR2GQ9BYE4 73 aa7.11□□□□□ -1.27
SMG5-201ENST00000361813 HYDINQ4G0P3 5121 aa7.1□□□□□ -1.27
SMG5-201ENST00000361813 RYR3Q15413 4870 aa7.1□□□□□ -1.27
SMG5-201ENST00000361813 CRCT1Q9UGL9 99 aa7.09□□□□□ -1.27
SMG5-201ENST00000361813 PKHD1P08F94 4074 aa7.06□□□□□ -1.28
SMG5-201ENST00000361813 MT2AP02795 61 aa7.01□□□□□ -1.29
SMG5-201ENST00000361813 MT1HP80294 61 aa6.99□□□□□ -1.29
SMG5-201ENST00000361813 MT1FP04733 61 aa6.94□□□□□ -1.3
SMG5-201ENST00000361813 KRTAP8-1Q8IUC2 63 aa6.94□□□□□ -1.3
SMG5-201ENST00000361813 RYR2Q92736 4967 aa6.86□□□□□ -1.31
SMG5-201ENST00000361813 KRTAP19-1Q8IUB9 90 aa6.86□□□□□ -1.31
SMG5-201ENST00000361813 KMT2CQ8NEZ4 4911 aaKnown RBP6.82□□□□□ -1.32
SMG5-201ENST00000361813 HSPG2P98160 4391 aa6.79□□□□□ -1.32
SMG5-201ENST00000361813 PKD1P98161 4303 aa6.79□□□□□ -1.32
SMG5-201ENST00000361813 SPRR5A0A1B0GTR4 108 aa6.78□□□□□ -1.32
SMG5-201ENST00000361813 KRTAP19-5Q3LI72 72 aa6.76□□□□□ -1.33
SMG5-201ENST00000361813 KRTAP10-5P60370 271 aa6.76□□□□□ -1.33
SMG5-201ENST00000361813 LPAP08519 4548 aa6.71□□□□□ -1.33
SMG5-201ENST00000361813 LCE3CQ5T5A8 94 aa6.7□□□□□ -1.34
SMG5-201ENST00000361813 KRTAP10-7P60409 375 aaPredicted RBP6.66□□□□□ -1.34
SMG5-201ENST00000361813 HERC2O95714 4834 aa6.65□□□□□ -1.34
SMG5-201ENST00000361813 KRTAP19-8Q3LI54 63 aa6.6□□□□□ -1.35
SMG5-201ENST00000361813 MT1XP80297 61 aa6.58□□□□□ -1.36
SMG5-201ENST00000361813 PKHD1L1Q86WI1 4243 aa6.55□□□□□ -1.36
SMG5-201ENST00000361813 TNXBP22105 4242 aa6.5□□□□□ -1.37
SMG5-201ENST00000361813 MT1BP07438 61 aa6.5□□□□□ -1.37
SMG5-201ENST00000361813 KRTAP19-2Q3LHN2 52 aa6.47□□□□□ -1.37
SMG5-201ENST00000361813 LCE2CQ5TA81 110 aa6.47□□□□□ -1.37
SMG5-201ENST00000361813 KRTAP9-8Q9BYQ0 159 aa6.44□□□□□ -1.38
SMG5-201ENST00000361813 MUC17Q685J3 4493 aa6.42□□□□□ -1.38
SMG5-201ENST00000361813 KRTAP4-8A0A0G2JLE6 195 aa6.31□□□□□ -1.4
SMG5-201ENST00000361813 KRTAP4-8Q9BYQ9 185 aa6.31□□□□□ -1.4
SMG5-201ENST00000361813 PCLOQ9Y6V0 5065 aa6.3□□□□□ -1.4
SMG5-201ENST00000361813 FLGP20930 4061 aaPredicted RBP6.27□□□□□ -1.41
SMG5-201ENST00000361813 HERC1Q15751 4861 aa6.26□□□□□ -1.41
SMG5-201ENST00000361813 EPPK1P58107 5090 aaKnown RBP6.25□□□□□ -1.41
SMG5-201ENST00000361813 KRTAP9-3Q9BYQ3 159 aa6.21□□□□□ -1.42
SMG5-201ENST00000361813 KRTAP19-4Q3LI73 84 aa6.19□□□□□ -1.42
SMG5-201ENST00000361813 ABCA13Q86UQ4 5058 aa6.18□□□□□ -1.42
SMG5-201ENST00000361813 KRTAP12-4P60329 112 aa6.13□□□□□ -1.43
SMG5-201ENST00000361813 SPRR2FQ96RM1 72 aa6.12□□□□□ -1.43
SMG5-201ENST00000361813 KRTAP4-7Q9BYR0 210 aa6.11□□□□□ -1.43
SMG5-201ENST00000361813 UBR4Q5T4S7 5183 aa6.1□□□□□ -1.43
SMG5-201ENST00000361813 MUC2Q02817 5179 aa6.08□□□□□ -1.44
SMG5-201ENST00000361813 MT1GP13640 62 aa6.08□□□□□ -1.44
SMG5-201ENST00000361813 BIRC6Q9NR09 4857 aa6.06□□□□□ -1.44
SMG5-201ENST00000361813 LCE3BQ5TA77 95 aa6.01□□□□□ -1.45
SMG5-201ENST00000361813 HMCN2Q8NDA2 5059 aa5.99□□□□□ -1.45
SMG5-201ENST00000361813 LCE2BO14633 110 aa5.96□□□□□ -1.46
SMG5-201ENST00000361813 FAT4Q6V0I7 4981 aa5.96□□□□□ -1.46
SMG5-201ENST00000361813 SYNE1Q8NF91 8797 aaKnown RBP5.91□□□□□ -1.46
SMG5-201ENST00000361813 MT1LQ93083 61 aa5.88□□□□□ -1.47
SMG5-201ENST00000361813 RNF213Q63HN8 5207 aa5.87□□□□□ -1.47
SMG5-201ENST00000361813 MT1EP04732 61 aa5.81□□□□□ -1.48
SMG5-201ENST00000361813 FSIP2Q5CZC0 6907 aa5.8□□□□□ -1.48
SMG5-201ENST00000361813 LCE3DQ9BYE3 92 aa5.7□□□□□ -1.5
SMG5-201ENST00000361813 LOC100996750A0A140TA64 210 aa5.68□□□□□ -1.5
SMG5-201ENST00000361813 KRTAP19-3Q7Z4W3 81 aa5.67□□□□□ -1.5
SMG5-201ENST00000361813 KRTAP19-7Q3SYF9 63 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms