RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 DEFB114Q30KQ6 69 aa-0.78□□□□□ -2.53
RPL39-201ENST00000361575 RIF1Q5UIP0 2472 aaKnown RBP-0.78□□□□□ -2.53
RPL39-201ENST00000361575 SCRIBQ14160 1630 aa-0.78□□□□□ -2.54
RPL39-201ENST00000361575 PREX2Q70Z35 1606 aa-0.78□□□□□ -2.54
RPL39-201ENST00000361575 RYR2Q92736 4967 aa-0.79□□□□□ -2.54
RPL39-201ENST00000361575 MT1XP80297 61 aa-0.79□□□□□ -2.54
RPL39-201ENST00000361575 KRTAP8-1Q8IUC2 63 aa-0.79□□□□□ -2.54
RPL39-201ENST00000361575 CSMD1Q96PZ7 3565 aa-0.79□□□□□ -2.54
RPL39-201ENST00000361575 GLI2P10070 1586 aa-0.79□□□□□ -2.54
RPL39-201ENST00000361575 M0QY20 66 aa-0.8□□□□□ -2.54
RPL39-201ENST00000361575 FRYQ5TBA9 3013 aa-0.8□□□□□ -2.54
RPL39-201ENST00000361575 DUOX2Q9NRD8 1548 aa-0.8□□□□□ -2.54
RPL39-201ENST00000361575 DNAH10Q8IVF4 4471 aa-0.8□□□□□ -2.54
RPL39-201ENST00000361575 COL6A5A8TX70 2615 aa-0.81□□□□□ -2.54
RPL39-201ENST00000361575 KAAG1Q9UBP8 84 aa-0.81□□□□□ -2.54
RPL39-201ENST00000361575 LMO7Q8WWI1 1683 aa-0.81□□□□□ -2.54
RPL39-201ENST00000361575 EFCAB6Q5THR3 1501 aa-0.82□□□□□ -2.54
RPL39-201ENST00000361575 LINC01549A6NIU2 74 aa-0.82□□□□□ -2.54
RPL39-201ENST00000361575 M0R1W7 72 aa-0.82□□□□□ -2.54
RPL39-201ENST00000361575 MGAQ8IWI9 3026 aa-0.82□□□□□ -2.54
RPL39-201ENST00000361575 TRRAPQ9Y4A5 3859 aa-0.83□□□□□ -2.54
RPL39-201ENST00000361575 USP9XQ93008 2570 aaPredicted RBP-0.83□□□□□ -2.54
RPL39-201ENST00000361575 ABRACLQ9P1F3 81 aa-0.84□□□□□ -2.54
RPL39-201ENST00000361575 UGGT1Q9NYU2 1555 aa-0.84□□□□□ -2.54
RPL39-201ENST00000361575 EYSQ5T1H1 3165 aa-0.84□□□□□ -2.54
RPL39-201ENST00000361575 MROH2AA6NES4 1674 aa-0.84□□□□□ -2.54
RPL39-201ENST00000361575 LINC01546A6NGU7 62 aa-0.85□□□□□ -2.55
RPL39-201ENST00000361575 K7EMI3 77 aa-0.85□□□□□ -2.55
RPL39-201ENST00000361575 EEA1Q15075 1411 aa-0.85□□□□□ -2.55
RPL39-201ENST00000361575 ITPR1Q14643 2758 aa-0.85□□□□□ -2.55
RPL39-201ENST00000361575 KIF21BO75037 1637 aa-0.86□□□□□ -2.55
RPL39-201ENST00000361575 SMG1Q96Q15 3661 aaKnown RBP-0.86□□□□□ -2.55
RPL39-201ENST00000361575 MT1EP04732 61 aa-0.86□□□□□ -2.55
RPL39-201ENST00000361575 SMCO4Q9NRQ5 59 aa-0.86□□□□□ -2.55
RPL39-201ENST00000361575 EFCAB5A4FU69 1503 aa-0.86□□□□□ -2.55
RPL39-201ENST00000361575 ADGRG4Q8IZF6 3080 aa-0.86□□□□□ -2.55
RPL39-201ENST00000361575 DDX60Q8IY21 1712 aaKnown RBP-0.86□□□□□ -2.55
RPL39-201ENST00000361575 SPTAN1Q13813 2472 aaKnown RBP-0.87□□□□□ -2.55
RPL39-201ENST00000361575 M0QZ58 72 aa-0.87□□□□□ -2.55
RPL39-201ENST00000361575 WFDC10BQ8IUB3 73 aa-0.87□□□□□ -2.55
RPL39-201ENST00000361575 MT1GP13640 62 aa-0.88□□□□□ -2.55
RPL39-201ENST00000361575 LINC00308Q8TCZ7 52 aa-0.88□□□□□ -2.55
RPL39-201ENST00000361575 MT1LQ93083 61 aa-0.88□□□□□ -2.55
RPL39-201ENST00000361575 ZFHX4Q86UP3 3567 aa-0.88□□□□□ -2.55
RPL39-201ENST00000361575 DNAH5Q8TE73 4624 aa-0.88□□□□□ -2.55
RPL39-201ENST00000361575 PDCD5O14737 125 aa-0.89□□□□□ -2.55
RPL39-201ENST00000361575 SPART-AS1P0CW21 52 aa-0.89□□□□□ -2.55
RPL39-201ENST00000361575 CHD7Q9P2D1 2997 aa-0.9□□□□□ -2.55
RPL39-201ENST00000361575 SMIM27A0A1W2PRY6 76 aa-0.9□□□□□ -2.55
RPL39-201ENST00000361575 A8MTW9 85 aa-0.91□□□□□ -2.56
RPL39-201ENST00000361575 TMEM167BQ9NRX6 74 aa-0.91□□□□□ -2.56
RPL39-201ENST00000361575 IQGAP1P46940 1657 aa-0.91□□□□□ -2.56
RPL39-201ENST00000361575 MYO9AB2RTY4 2548 aa-0.92□□□□□ -2.56
RPL39-201ENST00000361575 ABCA10Q8WWZ4 1543 aa-0.92□□□□□ -2.56
RPL39-201ENST00000361575 LRBAP50851 2863 aa-0.93□□□□□ -2.56
RPL39-201ENST00000361575 MT1HL1P0DM35 61 aa-0.93□□□□□ -2.56
RPL39-201ENST00000361575 NMES1Q9C002 83 aa-0.93□□□□□ -2.56
RPL39-201ENST00000361575 IGIPA6NJ69 53 aa-0.94□□□□□ -2.56
RPL39-201ENST00000361575 SERF2P84101 59 aa-0.94□□□□□ -2.56
RPL39-201ENST00000361575 CPS1P31327 1500 aa-0.94□□□□□ -2.56
RPL39-201ENST00000361575 CSMD2Q7Z408 3487 aa-0.95□□□□□ -2.56
RPL39-201ENST00000361575 DEFB4AO15263 64 aa-0.95□□□□□ -2.56
RPL39-201ENST00000361575 SYCP2Q9BX26 1530 aa-0.95□□□□□ -2.56
RPL39-201ENST00000361575 ABCA5Q8WWZ7 1642 aa-0.96□□□□□ -2.56
RPL39-201ENST00000361575 NRXN3Q9Y4C0 1643 aa-0.96□□□□□ -2.56
RPL39-201ENST00000361575 AGLP35573 1532 aa-0.98□□□□□ -2.57
RPL39-201ENST00000361575 POLR2KP53803 58 aaKnown RBP-0.98□□□□□ -2.57
RPL39-201ENST00000361575 CLTCL1P53675 1640 aa-0.98□□□□□ -2.57
RPL39-201ENST00000361575 PRXQ9BXM0 1461 aa-0.99□□□□□ -2.57
RPL39-201ENST00000361575 TFF3Q07654 80 aa-0.99□□□□□ -2.57
RPL39-201ENST00000361575 LEAP2Q969E1 77 aa-0.99□□□□□ -2.57
RPL39-201ENST00000361575 MT2AP02795 61 aa-1□□□□□ -2.57
RPL39-201ENST00000361575 MT1MQ8N339 61 aa-1□□□□□ -2.57
RPL39-201ENST00000361575 CFAP46Q8IYW2 2715 aa-1□□□□□ -2.57
RPL39-201ENST00000361575 CEP295Q9C0D2 2601 aa-1.01□□□□□ -2.57
RPL39-201ENST00000361575 MYO15AQ9UKN7 3530 aa-1.01□□□□□ -2.57
RPL39-201ENST00000361575 S100ZQ8WXG8 99 aa-1.01□□□□□ -2.57
RPL39-201ENST00000361575 VPS13CQ709C8 3753 aa-1.01□□□□□ -2.57
RPL39-201ENST00000361575 A0A087WWC5 75 aa-1.02□□□□□ -2.57
RPL39-201ENST00000361575 H0YGX0 51 aa-1.02□□□□□ -2.57
RPL39-201ENST00000361575 ABCA13Q86UQ4 5058 aa-1.04□□□□□ -2.58
RPL39-201ENST00000361575 NFAT5O94916 1531 aa-1.04□□□□□ -2.58
RPL39-201ENST00000361575 TLN1Q9Y490 2541 aaKnown RBP-1.04□□□□□ -2.58
RPL39-201ENST00000361575 DEFB131AP59861 70 aa-1.05□□□□□ -2.58
RPL39-201ENST00000361575 DMXL2Q8TDJ6 3036 aa-1.06□□□□□ -2.58
RPL39-201ENST00000361575 PLNP26678 52 aa-1.06□□□□□ -2.58
RPL39-201ENST00000361575 ABCC8Q09428 1581 aa-1.07□□□□□ -2.58
RPL39-201ENST00000361575 DEFB136Q30KP8 78 aa-1.07□□□□□ -2.58
RPL39-201ENST00000361575 CRYBG3Q68DQ2 2970 aa-1.08□□□□□ -2.58
RPL39-201ENST00000361575 SMIM5Q71RC9 77 aa-1.08□□□□□ -2.58
RPL39-201ENST00000361575 ATMQ13315 3056 aa-1.08□□□□□ -2.58
RPL39-201ENST00000361575 MT1BP07438 61 aa-1.09□□□□□ -2.58
RPL39-201ENST00000361575 ADCY10Q96PN6 1610 aa-1.09□□□□□ -2.58
RPL39-201ENST00000361575 FREM2Q5SZK8 3169 aa-1.11□□□□□ -2.59
RPL39-201ENST00000361575 SMIM2Q9BVW6 85 aa-1.12□□□□□ -2.59
RPL39-201ENST00000361575 FANCD2Q9BXW9 1451 aa-1.13□□□□□ -2.59
RPL39-201ENST00000361575 ITPR2Q14571 2701 aa-1.15□□□□□ -2.59
RPL39-201ENST00000361575 PRUNE2Q8WUY3 3088 aa-1.15□□□□□ -2.59
RPL39-201ENST00000361575 TRPM2O94759 1503 aa-1.15□□□□□ -2.59
RPL39-201ENST00000361575 RPS29P62273 56 aaKnown RBP-1.16□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms