RNA–Protein interactions for RNA: ENST00000361368.6

SMURF1-202, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMURF1, Length 5,581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-202ENST00000361368 ALMS1Q8TCU4 4167 aa8.35□□□□□ -1.07
SMURF1-202ENST00000361368 HUWE1Q7Z6Z7 4374 aaKnown RBP8.31□□□□□ -1.08
SMURF1-202ENST00000361368 AKAP9Q99996 3911 aa8.13□□□□□ -1.11
SMURF1-202ENST00000361368 MT1HP80294 61 aa8.12□□□□□ -1.11
SMURF1-202ENST00000361368 ZNF469Q96JG9 3925 aaPredicted RBP8.09□□□□□ -1.11
SMURF1-202ENST00000361368 MT2AP02795 61 aa8□□□□□ -1.13
SMURF1-202ENST00000361368 KRTAP10-7P60409 375 aaPredicted RBP8□□□□□ -1.13
SMURF1-202ENST00000361368 SPRR2GQ9BYE4 73 aa7.97□□□□□ -1.13
SMURF1-202ENST00000361368 KRTAP4-1Q9BYQ7 146 aa7.97□□□□□ -1.13
SMURF1-202ENST00000361368 SPRR2FQ96RM1 72 aa7.92□□□□□ -1.14
SMURF1-202ENST00000361368 TRRAPQ9Y4A5 3859 aa7.86□□□□□ -1.15
SMURF1-202ENST00000361368 KRTAP19-4Q3LI73 84 aa7.84□□□□□ -1.16
SMURF1-202ENST00000361368 DNAH2Q9P225 4427 aa7.82□□□□□ -1.16
SMURF1-202ENST00000361368 DNAH5Q8TE73 4624 aa7.81□□□□□ -1.16
SMURF1-202ENST00000361368 MT1FP04733 61 aa7.77□□□□□ -1.17
SMURF1-202ENST00000361368 KRTAP19-5Q3LI72 72 aa7.77□□□□□ -1.17
SMURF1-202ENST00000361368 DNAH1Q9P2D7 4330 aa7.76□□□□□ -1.17
SMURF1-202ENST00000361368 PLECQ15149 4684 aaKnown RBP7.72□□□□□ -1.17
SMURF1-202ENST00000361368 DNAH10Q8IVF4 4471 aa7.71□□□□□ -1.17
SMURF1-202ENST00000361368 LCE3CQ5T5A8 94 aa7.7□□□□□ -1.18
SMURF1-202ENST00000361368 DNAH11Q96DT5 4516 aa7.69□□□□□ -1.18
SMURF1-202ENST00000361368 DNAH9Q9NYC9 4486 aa7.62□□□□□ -1.19
SMURF1-202ENST00000361368 SPRR2EP22531 72 aa7.49□□□□□ -1.21
SMURF1-202ENST00000361368 SPRR2BP35325 72 aa7.49□□□□□ -1.21
SMURF1-202ENST00000361368 SPRR2AP35326 72 aa7.49□□□□□ -1.21
SMURF1-202ENST00000361368 FAT1Q14517 4588 aa7.46□□□□□ -1.22
SMURF1-202ENST00000361368 CSMD3Q7Z407 3707 aa7.39□□□□□ -1.23
SMURF1-202ENST00000361368 ANK2Q01484 3957 aa7.37□□□□□ -1.23
SMURF1-202ENST00000361368 KRTAP19-8Q3LI54 63 aa7.37□□□□□ -1.23
SMURF1-202ENST00000361368 DYNC1H1Q14204 4646 aaKnown RBP7.33□□□□□ -1.24
SMURF1-202ENST00000361368 DNAH17Q9UFH2 4485 aa7.33□□□□□ -1.24
SMURF1-202ENST00000361368 SPRR2DP22532 72 aa7.28□□□□□ -1.24
SMURF1-202ENST00000361368 VPS13DQ5THJ4 4388 aa7.23□□□□□ -1.25
SMURF1-202ENST00000361368 LCE2BO14633 110 aa7.22□□□□□ -1.25
SMURF1-202ENST00000361368 KRTAP12-4P60329 112 aa7.22□□□□□ -1.25
SMURF1-202ENST00000361368 SACSQ9NZJ4 4579 aa7.19□□□□□ -1.26
SMURF1-202ENST00000361368 RYR1P21817 5038 aa7.19□□□□□ -1.26
SMURF1-202ENST00000361368 LCE3BQ5TA77 95 aa7.19□□□□□ -1.26
SMURF1-202ENST00000361368 KRTAP19-1Q8IUB9 90 aa7.19□□□□□ -1.26
SMURF1-202ENST00000361368 LRP1BQ9NZR2 4599 aa7.18□□□□□ -1.26
SMURF1-202ENST00000361368 FAT2Q9NYQ8 4349 aa7.17□□□□□ -1.26
SMURF1-202ENST00000361368 LYSTQ99698 3801 aa7.14□□□□□ -1.27
SMURF1-202ENST00000361368 LRP1Q07954 4544 aaKnown RBP7.11□□□□□ -1.27
SMURF1-202ENST00000361368 CMYA5Q8N3K9 4069 aa7.11□□□□□ -1.27
SMURF1-202ENST00000361368 MT1XP80297 61 aa7.1□□□□□ -1.27
SMURF1-202ENST00000361368 DNHD1Q96M86 4753 aa7.08□□□□□ -1.28
SMURF1-202ENST00000361368 DYNC2H1Q8NCM8 4307 aaKnown RBP7.08□□□□□ -1.28
SMURF1-202ENST00000361368 MT1GP13640 62 aa7.08□□□□□ -1.28
SMURF1-202ENST00000361368 DNAH3Q8TD57 4116 aa7.05□□□□□ -1.28
SMURF1-202ENST00000361368 HERC1Q15751 4861 aa7.04□□□□□ -1.28
SMURF1-202ENST00000361368 DNAH8Q96JB1 4490 aa7.02□□□□□ -1.29
SMURF1-202ENST00000361368 MT1BP07438 61 aa7□□□□□ -1.29
SMURF1-202ENST00000361368 APOBP04114 4563 aaKnown RBP6.97□□□□□ -1.29
SMURF1-202ENST00000361368 DNAH7Q8WXX0 4024 aa6.95□□□□□ -1.3
SMURF1-202ENST00000361368 RYR3Q15413 4870 aa6.91□□□□□ -1.3
SMURF1-202ENST00000361368 KRTAP9-8Q9BYQ0 159 aa6.91□□□□□ -1.3
SMURF1-202ENST00000361368 FAT3Q8TDW7 4589 aa6.89□□□□□ -1.31
SMURF1-202ENST00000361368 LCE3DQ9BYE3 92 aa6.87□□□□□ -1.31
SMURF1-202ENST00000361368 FRAS1Q86XX4 4008 aa6.82□□□□□ -1.32
SMURF1-202ENST00000361368 KRTAP9-3Q9BYQ3 159 aa6.82□□□□□ -1.32
SMURF1-202ENST00000361368 KRTAP4-8A0A0G2JLE6 195 aa6.8□□□□□ -1.32
SMURF1-202ENST00000361368 KRTAP4-8Q9BYQ9 185 aa6.8□□□□□ -1.32
SMURF1-202ENST00000361368 STARD9Q9P2P6 4700 aa6.78□□□□□ -1.32
SMURF1-202ENST00000361368 LCE3EQ5T5B0 92 aa6.78□□□□□ -1.32
SMURF1-202ENST00000361368 HSPG2P98160 4391 aa6.75□□□□□ -1.33
SMURF1-202ENST00000361368 LCE2CQ5TA81 110 aa6.75□□□□□ -1.33
SMURF1-202ENST00000361368 KRTAP19-3Q7Z4W3 81 aa6.72□□□□□ -1.33
SMURF1-202ENST00000361368 HECTD4Q9Y4D8 3996 aa6.72□□□□□ -1.33
SMURF1-202ENST00000361368 KRTAP17-1Q9BYP8 105 aa6.71□□□□□ -1.34
SMURF1-202ENST00000361368 KMT2AQ03164 3969 aa6.69□□□□□ -1.34
SMURF1-202ENST00000361368 LCE2DQ5TA82 110 aaPredicted RBP6.67□□□□□ -1.34
SMURF1-202ENST00000361368 RYR2Q92736 4967 aa6.66□□□□□ -1.34
SMURF1-202ENST00000361368 SPRR5A0A1B0GTR4 108 aa6.65□□□□□ -1.35
SMURF1-202ENST00000361368 VPS13BQ7Z7G8 4022 aa6.65□□□□□ -1.35
SMURF1-202ENST00000361368 DNAH6Q9C0G6 4158 aa6.61□□□□□ -1.35
SMURF1-202ENST00000361368 PRKDCP78527 4128 aaKnown RBP6.6□□□□□ -1.35
SMURF1-202ENST00000361368 MT1LQ93083 61 aa6.6□□□□□ -1.35
SMURF1-202ENST00000361368 PKD1P98161 4303 aa6.52□□□□□ -1.37
SMURF1-202ENST00000361368 MYCBP2O75592 4640 aa6.51□□□□□ -1.37
SMURF1-202ENST00000361368 MT1EP04732 61 aa6.48□□□□□ -1.37
SMURF1-202ENST00000361368 MT3P25713 68 aa6.47□□□□□ -1.37
SMURF1-202ENST00000361368 KIAA1109Q2LD37 5005 aa6.45□□□□□ -1.38
SMURF1-202ENST00000361368 PKHD1L1Q86WI1 4243 aa6.39□□□□□ -1.39
SMURF1-202ENST00000361368 BIRC6Q9NR09 4857 aa6.37□□□□□ -1.39
SMURF1-202ENST00000361368 MT4P47944 62 aa6.35□□□□□ -1.39
SMURF1-202ENST00000361368 KRTAP4-7Q9BYR0 210 aa6.34□□□□□ -1.39
SMURF1-202ENST00000361368 HERC2O95714 4834 aa6.34□□□□□ -1.39
SMURF1-202ENST00000361368 PCLOQ9Y6V0 5065 aa6.33□□□□□ -1.4
SMURF1-202ENST00000361368 MT1MQ8N339 61 aa6.33□□□□□ -1.4
SMURF1-202ENST00000361368 HYDINQ4G0P3 5121 aa6.31□□□□□ -1.4
SMURF1-202ENST00000361368 KRTAP19-6Q3LI70 58 aa6.31□□□□□ -1.4
SMURF1-202ENST00000361368 KRTAP9-2Q9BYQ4 174 aa6.23□□□□□ -1.41
SMURF1-202ENST00000361368 PKHD1P08F94 4074 aa6.22□□□□□ -1.41
SMURF1-202ENST00000361368 KRTAP19-2Q3LHN2 52 aa6.18□□□□□ -1.42
SMURF1-202ENST00000361368 LCE1BQ5T7P3 118 aa6.16□□□□□ -1.42
SMURF1-202ENST00000361368 EPPK1P58107 5090 aaKnown RBP6.15□□□□□ -1.43
SMURF1-202ENST00000361368 LCE1DQ5T752 114 aa6.13□□□□□ -1.43
SMURF1-202ENST00000361368 PRM1P04553 51 aa6.11□□□□□ -1.43
SMURF1-202ENST00000361368 LRP2P98164 4655 aa6.03□□□□□ -1.44
SMURF1-202ENST00000361368 LOC100996750A0A140TA64 210 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms