RNA–Protein interactions for RNA: ENST00000360982.2

NCKAP1-201, Transcript of NCK associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene NCKAP1, Length 4,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-201ENST00000360982 DNAH5Q8TE73 4624 aa9.08□□□□□ -0.96
NCKAP1-201ENST00000360982 PLECQ15149 4684 aaKnown RBP9.02□□□□□ -0.97
NCKAP1-201ENST00000360982 DNAH11Q96DT5 4516 aa8.94□□□□□ -0.98
NCKAP1-201ENST00000360982 DNAH1Q9P2D7 4330 aa8.88□□□□□ -0.99
NCKAP1-201ENST00000360982 ALMS1Q8TCU4 4167 aa8.85□□□□□ -0.99
NCKAP1-201ENST00000360982 KRTAP12-3P60328 96 aa8.83□□□□□ -1
NCKAP1-201ENST00000360982 KRTAP23-1A1A580 65 aa8.79□□□□□ -1
NCKAP1-201ENST00000360982 CRCT1Q9UGL9 99 aa8.78□□□□□ -1
NCKAP1-201ENST00000360982 FAT1Q14517 4588 aa8.76□□□□□ -1.01
NCKAP1-201ENST00000360982 STARD9Q9P2P6 4700 aa8.72□□□□□ -1.01
NCKAP1-201ENST00000360982 DNAH10Q8IVF4 4471 aa8.71□□□□□ -1.02
NCKAP1-201ENST00000360982 PRKDCP78527 4128 aaKnown RBP8.7□□□□□ -1.02
NCKAP1-201ENST00000360982 DYNC1H1Q14204 4646 aaKnown RBP8.7□□□□□ -1.02
NCKAP1-201ENST00000360982 VPS13DQ5THJ4 4388 aa8.7□□□□□ -1.02
NCKAP1-201ENST00000360982 RYR1P21817 5038 aa8.67□□□□□ -1.02
NCKAP1-201ENST00000360982 LORP23490 312 aaPredicted RBP8.63□□□□□ -1.03
NCKAP1-201ENST00000360982 LRP1BQ9NZR2 4599 aa8.62□□□□□ -1.03
NCKAP1-201ENST00000360982 LCE3AQ5TA76 89 aa8.61□□□□□ -1.03
NCKAP1-201ENST00000360982 KRTAP8-1Q8IUC2 63 aa8.6□□□□□ -1.03
NCKAP1-201ENST00000360982 DNAH17Q9UFH2 4485 aa8.56□□□□□ -1.04
NCKAP1-201ENST00000360982 KIAA1109Q2LD37 5005 aa8.5□□□□□ -1.05
NCKAP1-201ENST00000360982 MT1HP80294 61 aa8.47□□□□□ -1.05
NCKAP1-201ENST00000360982 KRTAP4-1Q9BYQ7 146 aa8.46□□□□□ -1.05
NCKAP1-201ENST00000360982 DNAH2Q9P225 4427 aa8.44□□□□□ -1.06
NCKAP1-201ENST00000360982 ANK2Q01484 3957 aa8.41□□□□□ -1.06
NCKAP1-201ENST00000360982 DNAH8Q96JB1 4490 aa8.4□□□□□ -1.06
NCKAP1-201ENST00000360982 KMT2AQ03164 3969 aa8.39□□□□□ -1.07
NCKAP1-201ENST00000360982 LYSTQ99698 3801 aa8.38□□□□□ -1.07
NCKAP1-201ENST00000360982 SACSQ9NZJ4 4579 aa8.37□□□□□ -1.07
NCKAP1-201ENST00000360982 MT2AP02795 61 aa8.36□□□□□ -1.07
NCKAP1-201ENST00000360982 RYR3Q15413 4870 aa8.33□□□□□ -1.08
NCKAP1-201ENST00000360982 MYCBP2O75592 4640 aa8.29□□□□□ -1.08
NCKAP1-201ENST00000360982 FAT2Q9NYQ8 4349 aa8.29□□□□□ -1.08
NCKAP1-201ENST00000360982 SPRR2GQ9BYE4 73 aa8.28□□□□□ -1.08
NCKAP1-201ENST00000360982 DYNC2H1Q8NCM8 4307 aaKnown RBP8.26□□□□□ -1.09
NCKAP1-201ENST00000360982 VPS13BQ7Z7G8 4022 aa8.23□□□□□ -1.09
NCKAP1-201ENST00000360982 APOBP04114 4563 aaKnown RBP8.17□□□□□ -1.1
NCKAP1-201ENST00000360982 DNAH3Q8TD57 4116 aa8.16□□□□□ -1.1
NCKAP1-201ENST00000360982 KRTAP17-1Q9BYP8 105 aa8.14□□□□□ -1.11
NCKAP1-201ENST00000360982 MT1FP04733 61 aa8.13□□□□□ -1.11
NCKAP1-201ENST00000360982 KRTAP10-5P60370 271 aa8.1□□□□□ -1.11
NCKAP1-201ENST00000360982 LRP1Q07954 4544 aaKnown RBP8.07□□□□□ -1.12
NCKAP1-201ENST00000360982 FAT3Q8TDW7 4589 aa8.07□□□□□ -1.12
NCKAP1-201ENST00000360982 SPRR2FQ96RM1 72 aa8.01□□□□□ -1.13
NCKAP1-201ENST00000360982 CMYA5Q8N3K9 4069 aa7.96□□□□□ -1.14
NCKAP1-201ENST00000360982 HERC2O95714 4834 aa7.95□□□□□ -1.14
NCKAP1-201ENST00000360982 RYR2Q92736 4967 aa7.94□□□□□ -1.14
NCKAP1-201ENST00000360982 KRTAP10-7P60409 375 aaPredicted RBP7.93□□□□□ -1.14
NCKAP1-201ENST00000360982 DNAH6Q9C0G6 4158 aa7.93□□□□□ -1.14
NCKAP1-201ENST00000360982 HYDINQ4G0P3 5121 aa7.91□□□□□ -1.14
NCKAP1-201ENST00000360982 KRTAP19-4Q3LI73 84 aa7.89□□□□□ -1.15
NCKAP1-201ENST00000360982 KRTAP19-5Q3LI72 72 aa7.81□□□□□ -1.16
NCKAP1-201ENST00000360982 FRAS1Q86XX4 4008 aa7.79□□□□□ -1.16
NCKAP1-201ENST00000360982 DNAH7Q8WXX0 4024 aa7.79□□□□□ -1.16
NCKAP1-201ENST00000360982 LRP2P98164 4655 aa7.75□□□□□ -1.17
NCKAP1-201ENST00000360982 KRTAP19-8Q3LI54 63 aa7.74□□□□□ -1.17
NCKAP1-201ENST00000360982 HECTD4Q9Y4D8 3996 aa7.74□□□□□ -1.17
NCKAP1-201ENST00000360982 PKHD1P08F94 4074 aa7.72□□□□□ -1.17
NCKAP1-201ENST00000360982 BIRC6Q9NR09 4857 aa7.7□□□□□ -1.18
NCKAP1-201ENST00000360982 KMT2CQ8NEZ4 4911 aaKnown RBP7.66□□□□□ -1.18
NCKAP1-201ENST00000360982 LCE3CQ5T5A8 94 aa7.66□□□□□ -1.18
NCKAP1-201ENST00000360982 KRTAP19-1Q8IUB9 90 aa7.65□□□□□ -1.18
NCKAP1-201ENST00000360982 SPRR5A0A1B0GTR4 108 aa7.62□□□□□ -1.19
NCKAP1-201ENST00000360982 PCLOQ9Y6V0 5065 aa7.6□□□□□ -1.19
NCKAP1-201ENST00000360982 HSPG2P98160 4391 aa7.6□□□□□ -1.19
NCKAP1-201ENST00000360982 SPRR2EP22531 72 aa7.52□□□□□ -1.21
NCKAP1-201ENST00000360982 SPRR2BP35325 72 aa7.52□□□□□ -1.21
NCKAP1-201ENST00000360982 SPRR2AP35326 72 aa7.52□□□□□ -1.21
NCKAP1-201ENST00000360982 KRTAP9-8Q9BYQ0 159 aa7.43□□□□□ -1.22
NCKAP1-201ENST00000360982 HERC1Q15751 4861 aa7.42□□□□□ -1.22
NCKAP1-201ENST00000360982 MT1XP80297 61 aa7.4□□□□□ -1.23
NCKAP1-201ENST00000360982 MT1BP07438 61 aa7.39□□□□□ -1.23
NCKAP1-201ENST00000360982 PKD1P98161 4303 aa7.37□□□□□ -1.23
NCKAP1-201ENST00000360982 EPPK1P58107 5090 aaKnown RBP7.33□□□□□ -1.24
NCKAP1-201ENST00000360982 LPAP08519 4548 aa7.32□□□□□ -1.24
NCKAP1-201ENST00000360982 LCE2CQ5TA81 110 aa7.3□□□□□ -1.24
NCKAP1-201ENST00000360982 SPRR2DP22532 72 aa7.3□□□□□ -1.24
NCKAP1-201ENST00000360982 KRTAP9-3Q9BYQ3 159 aa7.28□□□□□ -1.24
NCKAP1-201ENST00000360982 LCE2BO14633 110 aa7.28□□□□□ -1.24
NCKAP1-201ENST00000360982 ABCA13Q86UQ4 5058 aa7.26□□□□□ -1.25
NCKAP1-201ENST00000360982 MT1GP13640 62 aa7.24□□□□□ -1.25
NCKAP1-201ENST00000360982 KRTAP12-4P60329 112 aa7.2□□□□□ -1.26
NCKAP1-201ENST00000360982 KRTAP4-8A0A0G2JLE6 195 aa7.08□□□□□ -1.28
NCKAP1-201ENST00000360982 KRTAP4-8Q9BYQ9 185 aa7.08□□□□□ -1.28
NCKAP1-201ENST00000360982 LCE3BQ5TA77 95 aa7.06□□□□□ -1.28
NCKAP1-201ENST00000360982 KRTAP19-2Q3LHN2 52 aa7.05□□□□□ -1.28
NCKAP1-201ENST00000360982 PKHD1L1Q86WI1 4243 aa7.03□□□□□ -1.28
NCKAP1-201ENST00000360982 UBR4Q5T4S7 5183 aa7.01□□□□□ -1.29
NCKAP1-201ENST00000360982 FSIP2Q5CZC0 6907 aa7□□□□□ -1.29
NCKAP1-201ENST00000360982 TNXBP22105 4242 aa6.99□□□□□ -1.29
NCKAP1-201ENST00000360982 MUC17Q685J3 4493 aa6.94□□□□□ -1.3
NCKAP1-201ENST00000360982 KRTAP19-3Q7Z4W3 81 aa6.91□□□□□ -1.3
NCKAP1-201ENST00000360982 RNF213Q63HN8 5207 aa6.84□□□□□ -1.31
NCKAP1-201ENST00000360982 FAT4Q6V0I7 4981 aa6.82□□□□□ -1.32
NCKAP1-201ENST00000360982 FLGP20930 4061 aaPredicted RBP6.81□□□□□ -1.32
NCKAP1-201ENST00000360982 SYNE1Q8NF91 8797 aaKnown RBP6.77□□□□□ -1.33
NCKAP1-201ENST00000360982 KRTAP9-2Q9BYQ4 174 aa6.75□□□□□ -1.33
NCKAP1-201ENST00000360982 KRTAP19-6Q3LI70 58 aa6.75□□□□□ -1.33
NCKAP1-201ENST00000360982 MT1LQ93083 61 aa6.75□□□□□ -1.33
NCKAP1-201ENST00000360982 LCE3DQ9BYE3 92 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms