RNA–Protein interactions for RNA: ENST00000359422.8

LMBR1-202, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 4,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-202ENST00000359422 DNHD1Q96M86 4753 aa7.32□□□□□ -1.24
LMBR1-202ENST00000359422 DNAH7Q8WXX0 4024 aa7.31□□□□□ -1.24
LMBR1-202ENST00000359422 DNAH1Q9P2D7 4330 aa7.27□□□□□ -1.25
LMBR1-202ENST00000359422 KRTAP10-4P60372 401 aaPredicted RBP7.25□□□□□ -1.25
LMBR1-202ENST00000359422 KRTAP4-5Q9BYR2 181 aa7.25□□□□□ -1.25
LMBR1-202ENST00000359422 FRAS1Q86XX4 4008 aa7.24□□□□□ -1.25
LMBR1-202ENST00000359422 KRTAP10-12P60413 245 aa7.23□□□□□ -1.25
LMBR1-202ENST00000359422 STARD9Q9P2P6 4700 aa7.23□□□□□ -1.25
LMBR1-202ENST00000359422 CMYA5Q8N3K9 4069 aa7.22□□□□□ -1.25
LMBR1-202ENST00000359422 KMT2AQ03164 3969 aa7.18□□□□□ -1.26
LMBR1-202ENST00000359422 PRKDCP78527 4128 aaKnown RBP7.18□□□□□ -1.26
LMBR1-202ENST00000359422 DNAH8Q96JB1 4490 aa7.18□□□□□ -1.26
LMBR1-202ENST00000359422 CRCT1Q9UGL9 99 aa7.16□□□□□ -1.26
LMBR1-202ENST00000359422 FAT1Q14517 4588 aa7.12□□□□□ -1.27
LMBR1-202ENST00000359422 DNAH5Q8TE73 4624 aa7.11□□□□□ -1.27
LMBR1-202ENST00000359422 LRP1BQ9NZR2 4599 aa7.09□□□□□ -1.27
LMBR1-202ENST00000359422 KRTAP12-3P60328 96 aa7.08□□□□□ -1.28
LMBR1-202ENST00000359422 INE1O15225 51 aa7.06□□□□□ -1.28
LMBR1-202ENST00000359422 DNAH3Q8TD57 4116 aa7.02□□□□□ -1.29
LMBR1-202ENST00000359422 VPS13DQ5THJ4 4388 aa7.01□□□□□ -1.29
LMBR1-202ENST00000359422 MYCBP2O75592 4640 aa7□□□□□ -1.29
LMBR1-202ENST00000359422 LORP23490 312 aaPredicted RBP6.99□□□□□ -1.29
LMBR1-202ENST00000359422 DNAH17Q9UFH2 4485 aa6.98□□□□□ -1.29
LMBR1-202ENST00000359422 DNAH6Q9C0G6 4158 aa6.96□□□□□ -1.29
LMBR1-202ENST00000359422 LCE3AQ5TA76 89 aa6.95□□□□□ -1.3
LMBR1-202ENST00000359422 DNAH2Q9P225 4427 aa6.95□□□□□ -1.3
LMBR1-202ENST00000359422 HECTD4Q9Y4D8 3996 aa6.9□□□□□ -1.3
LMBR1-202ENST00000359422 KRTAP23-1A1A580 65 aa6.9□□□□□ -1.3
LMBR1-202ENST00000359422 VPS13BQ7Z7G8 4022 aa6.84□□□□□ -1.31
LMBR1-202ENST00000359422 DYNC1H1Q14204 4646 aaKnown RBP6.84□□□□□ -1.31
LMBR1-202ENST00000359422 FAT3Q8TDW7 4589 aa6.76□□□□□ -1.33
LMBR1-202ENST00000359422 LRP1Q07954 4544 aaKnown RBP6.73□□□□□ -1.33
LMBR1-202ENST00000359422 RYR1P21817 5038 aa6.7□□□□□ -1.34
LMBR1-202ENST00000359422 HYDINQ4G0P3 5121 aa6.7□□□□□ -1.34
LMBR1-202ENST00000359422 ALMS1Q8TCU4 4167 aa6.7□□□□□ -1.34
LMBR1-202ENST00000359422 KIAA1109Q2LD37 5005 aa6.69□□□□□ -1.34
LMBR1-202ENST00000359422 DYNC2H1Q8NCM8 4307 aaKnown RBP6.69□□□□□ -1.34
LMBR1-202ENST00000359422 KRTAP8-1Q8IUC2 63 aa6.68□□□□□ -1.34
LMBR1-202ENST00000359422 SACSQ9NZJ4 4579 aa6.67□□□□□ -1.34
LMBR1-202ENST00000359422 FAT2Q9NYQ8 4349 aa6.67□□□□□ -1.34
LMBR1-202ENST00000359422 PKHD1P08F94 4074 aa6.66□□□□□ -1.34
LMBR1-202ENST00000359422 KRTAP10-5P60370 271 aa6.64□□□□□ -1.35
LMBR1-202ENST00000359422 KRTAP4-1Q9BYQ7 146 aa6.64□□□□□ -1.35
LMBR1-202ENST00000359422 APOBP04114 4563 aaKnown RBP6.6□□□□□ -1.35
LMBR1-202ENST00000359422 MT1HP80294 61 aa6.5□□□□□ -1.37
LMBR1-202ENST00000359422 RYR3Q15413 4870 aa6.49□□□□□ -1.37
LMBR1-202ENST00000359422 MT2AP02795 61 aa6.48□□□□□ -1.37
LMBR1-202ENST00000359422 SPRR2GQ9BYE4 73 aa6.42□□□□□ -1.38
LMBR1-202ENST00000359422 LRP2P98164 4655 aa6.42□□□□□ -1.38
LMBR1-202ENST00000359422 PKD1P98161 4303 aa6.41□□□□□ -1.38
LMBR1-202ENST00000359422 KRTAP17-1Q9BYP8 105 aa6.39□□□□□ -1.39
LMBR1-202ENST00000359422 KMT2CQ8NEZ4 4911 aaKnown RBP6.36□□□□□ -1.39
LMBR1-202ENST00000359422 MT1FP04733 61 aa6.34□□□□□ -1.39
LMBR1-202ENST00000359422 HSPG2P98160 4391 aa6.25□□□□□ -1.41
LMBR1-202ENST00000359422 KRTAP19-5Q3LI72 72 aa6.23□□□□□ -1.41
LMBR1-202ENST00000359422 RYR2Q92736 4967 aa6.22□□□□□ -1.41
LMBR1-202ENST00000359422 SPRR2FQ96RM1 72 aa6.22□□□□□ -1.41
LMBR1-202ENST00000359422 LPAP08519 4548 aa6.18□□□□□ -1.42
LMBR1-202ENST00000359422 KRTAP10-7P60409 375 aaPredicted RBP6.16□□□□□ -1.42
LMBR1-202ENST00000359422 LCE3CQ5T5A8 94 aa6.12□□□□□ -1.43
LMBR1-202ENST00000359422 PKHD1L1Q86WI1 4243 aa6.09□□□□□ -1.44
LMBR1-202ENST00000359422 HERC2O95714 4834 aa6.07□□□□□ -1.44
LMBR1-202ENST00000359422 EPPK1P58107 5090 aaKnown RBP6.05□□□□□ -1.44
LMBR1-202ENST00000359422 SYNE1Q8NF91 8797 aaKnown RBP6.02□□□□□ -1.45
LMBR1-202ENST00000359422 KRTAP19-1Q8IUB9 90 aa6.01□□□□□ -1.45
LMBR1-202ENST00000359422 KRTAP19-4Q3LI73 84 aa5.96□□□□□ -1.46
LMBR1-202ENST00000359422 KRTAP19-8Q3LI54 63 aa5.95□□□□□ -1.46
LMBR1-202ENST00000359422 MUC2Q02817 5179 aa5.92□□□□□ -1.46
LMBR1-202ENST00000359422 TNXBP22105 4242 aa5.89□□□□□ -1.47
LMBR1-202ENST00000359422 ABCA13Q86UQ4 5058 aa5.88□□□□□ -1.47
LMBR1-202ENST00000359422 MT1XP80297 61 aa5.82□□□□□ -1.48
LMBR1-202ENST00000359422 PCLOQ9Y6V0 5065 aa5.79□□□□□ -1.48
LMBR1-202ENST00000359422 MT1BP07438 61 aa5.76□□□□□ -1.49
LMBR1-202ENST00000359422 LCE3BQ5TA77 95 aa5.74□□□□□ -1.49
LMBR1-202ENST00000359422 RNF213Q63HN8 5207 aa5.74□□□□□ -1.49
LMBR1-202ENST00000359422 SPRR2EP22531 72 aa5.74□□□□□ -1.49
LMBR1-202ENST00000359422 SPRR2BP35325 72 aa5.74□□□□□ -1.49
LMBR1-202ENST00000359422 SPRR2AP35326 72 aa5.74□□□□□ -1.49
LMBR1-202ENST00000359422 KRTAP9-8Q9BYQ0 159 aa5.72□□□□□ -1.49
LMBR1-202ENST00000359422 FAT4Q6V0I7 4981 aa5.71□□□□□ -1.49
LMBR1-202ENST00000359422 KRTAP4-8A0A0G2JLE6 195 aa5.69□□□□□ -1.5
LMBR1-202ENST00000359422 MT1GP13640 62 aa5.69□□□□□ -1.5
LMBR1-202ENST00000359422 KRTAP4-8Q9BYQ9 185 aa5.69□□□□□ -1.5
LMBR1-202ENST00000359422 HERC1Q15751 4861 aa5.67□□□□□ -1.5
LMBR1-202ENST00000359422 KRTAP12-4P60329 112 aa5.66□□□□□ -1.5
LMBR1-202ENST00000359422 LCE2CQ5TA81 110 aa5.59□□□□□ -1.52
LMBR1-202ENST00000359422 KRTAP9-3Q9BYQ3 159 aa5.57□□□□□ -1.52
LMBR1-202ENST00000359422 UBR4Q5T4S7 5183 aa5.55□□□□□ -1.52
LMBR1-202ENST00000359422 LCE2BO14633 110 aa5.55□□□□□ -1.52
LMBR1-202ENST00000359422 FSIP2Q5CZC0 6907 aa5.55□□□□□ -1.52
LMBR1-202ENST00000359422 SPRR2DP22532 72 aa5.54□□□□□ -1.52
LMBR1-202ENST00000359422 MUC17Q685J3 4493 aa5.53□□□□□ -1.52
LMBR1-202ENST00000359422 SPRR5A0A1B0GTR4 108 aa5.52□□□□□ -1.53
LMBR1-202ENST00000359422 BIRC6Q9NR09 4857 aa5.48□□□□□ -1.53
LMBR1-202ENST00000359422 KRTAP19-2Q3LHN2 52 aa5.48□□□□□ -1.53
LMBR1-202ENST00000359422 LCE3DQ9BYE3 92 aa5.44□□□□□ -1.54
LMBR1-202ENST00000359422 FLGP20930 4061 aaPredicted RBP5.43□□□□□ -1.54
LMBR1-202ENST00000359422 KRTAP4-7Q9BYR0 210 aa5.37□□□□□ -1.55
LMBR1-202ENST00000359422 HMCN2Q8NDA2 5059 aa5.36□□□□□ -1.55
LMBR1-202ENST00000359422 LCE3EQ5T5B0 92 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms