RNA–Protein interactions for RNA: ENST00000355231.9

HMBOX1-202, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-202ENST00000355231 FAM168BA1KXE4 195 aa2.88□□□□□ -1.95
HMBOX1-202ENST00000355231 MRPL34Q9BQ48 92 aaKnown RBP2.88□□□□□ -1.95
HMBOX1-202ENST00000355231 LINC00304Q8N9R0 145 aa2.87□□□□□ -1.95
HMBOX1-202ENST00000355231 DNAH5Q8TE73 4624 aa2.86□□□□□ -1.95
HMBOX1-202ENST00000355231 FAT1Q14517 4588 aa2.86□□□□□ -1.95
HMBOX1-202ENST00000355231 HERC1Q15751 4861 aa2.86□□□□□ -1.95
HMBOX1-202ENST00000355231 KRTAP1-5Q9BYS1 174 aa2.86□□□□□ -1.95
HMBOX1-202ENST00000355231 A0A087WTM6 91 aa2.85□□□□□ -1.95
HMBOX1-202ENST00000355231 KRTAP15-1Q3LI76 137 aa2.85□□□□□ -1.95
HMBOX1-202ENST00000355231 KRTAP7-1Q8IUC3 87 aa2.85□□□□□ -1.95
HMBOX1-202ENST00000355231 SSBP3-AS1Q7Z2R9 100 aa2.85□□□□□ -1.95
HMBOX1-202ENST00000355231 KRTAP11-1Q8IUC1 163 aa2.85□□□□□ -1.95
HMBOX1-202ENST00000355231 SPRR1BP22528 89 aa2.84□□□□□ -1.95
HMBOX1-202ENST00000355231 A0A1B0GVX0 72 aa2.83□□□□□ -1.96
HMBOX1-202ENST00000355231 UBE2DNLQ8IWF7 75 aa2.82□□□□□ -1.96
HMBOX1-202ENST00000355231 Q8N1X5 172 aa2.82□□□□□ -1.96
HMBOX1-202ENST00000355231 NBDYA0A0U1RRE5 68 aa2.82□□□□□ -1.96
HMBOX1-202ENST00000355231 PANO1I0J062 215 aa2.82□□□□□ -1.96
HMBOX1-202ENST00000355231 C14orf177Q52M58 125 aa2.82□□□□□ -1.96
HMBOX1-202ENST00000355231 Q6ZRN7 208 aaPredicted RBP2.82□□□□□ -1.96
HMBOX1-202ENST00000355231 A0A096LNI7 61 aa2.81□□□□□ -1.96
HMBOX1-202ENST00000355231 Q96NJ1 140 aa2.81□□□□□ -1.96
HMBOX1-202ENST00000355231 CIRBP-AS1Q8TBR5 109 aa2.8□□□□□ -1.96
HMBOX1-202ENST00000355231 A0A1W2PNN7 141 aa2.79□□□□□ -1.96
HMBOX1-202ENST00000355231 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.79□□□□□ -1.96
HMBOX1-202ENST00000355231 MYCBP2O75592 4640 aa2.79□□□□□ -1.96
HMBOX1-202ENST00000355231 SRRM2Q9UQ35 2752 aaKnown RBP2.79□□□□□ -1.96
HMBOX1-202ENST00000355231 KRTAP13-3Q3SY46 172 aa2.79□□□□□ -1.96
HMBOX1-202ENST00000355231 COX6B2Q6YFQ2 88 aa2.78□□□□□ -1.96
HMBOX1-202ENST00000355231 A0A1B0GU33 70 aa2.77□□□□□ -1.97
HMBOX1-202ENST00000355231 KRTAP23-1A1A580 65 aa2.77□□□□□ -1.97
HMBOX1-202ENST00000355231 PSORS1C2Q9UIG4 136 aa2.77□□□□□ -1.97
HMBOX1-202ENST00000355231 MUC2Q02817 5179 aa2.77□□□□□ -1.97
HMBOX1-202ENST00000355231 DNAH8Q96JB1 4490 aa2.76□□□□□ -1.97
HMBOX1-202ENST00000355231 A0A0G2JQZ4 141 aa2.76□□□□□ -1.97
HMBOX1-202ENST00000355231 H0YAA0 97 aa2.76□□□□□ -1.97
HMBOX1-202ENST00000355231 IGKV2-30P06310 120 aa2.76□□□□□ -1.97
HMBOX1-202ENST00000355231 KRTAP10-1P60331 282 aa2.76□□□□□ -1.97
HMBOX1-202ENST00000355231 CRIPTQ9P021 101 aa2.76□□□□□ -1.97
HMBOX1-202ENST00000355231 VPS13BQ7Z7G8 4022 aa2.75□□□□□ -1.97
HMBOX1-202ENST00000355231 PRLHP81277 87 aa2.75□□□□□ -1.97
HMBOX1-202ENST00000355231 KRTAP13-1Q8IUC0 172 aa2.75□□□□□ -1.97
HMBOX1-202ENST00000355231 SPACA4Q8TDM5 124 aa2.75□□□□□ -1.97
HMBOX1-202ENST00000355231 IGKV2D-30A0A075B6S6 120 aa2.74□□□□□ -1.97
HMBOX1-202ENST00000355231 H1FX-AS1Q4G0G2 97 aa2.74□□□□□ -1.97
HMBOX1-202ENST00000355231 Q6ZSA8 131 aa2.74□□□□□ -1.97
HMBOX1-202ENST00000355231 LRP1Q07954 4544 aaKnown RBP2.73□□□□□ -1.97
HMBOX1-202ENST00000355231 SMR3BP02814 79 aaPredicted RBP2.73□□□□□ -1.97
HMBOX1-202ENST00000355231 FLG2Q5D862 2391 aaPredicted RBP2.72□□□□□ -1.97
HMBOX1-202ENST00000355231 HMCN2Q8NDA2 5059 aa2.7□□□□□ -1.98
HMBOX1-202ENST00000355231 Q5VSD8 79 aa2.69□□□□□ -1.98
HMBOX1-202ENST00000355231 DMBT1Q9UGM3 2413 aaPredicted RBP2.69□□□□□ -1.98
HMBOX1-202ENST00000355231 FAT3Q8TDW7 4589 aa2.69□□□□□ -1.98
HMBOX1-202ENST00000355231 RPL37P61927 97 aaKnown RBP2.69□□□□□ -1.98
HMBOX1-202ENST00000355231 KRTAP10-4P60372 401 aaPredicted RBP2.67□□□□□ -1.98
HMBOX1-202ENST00000355231 TPRXLQ17RH7 258 aa2.67□□□□□ -1.98
HMBOX1-202ENST00000355231 PKHD1L1Q86WI1 4243 aa2.65□□□□□ -1.99
HMBOX1-202ENST00000355231 PLAC4Q8WY50 150 aa2.64□□□□□ -1.99
HMBOX1-202ENST00000355231 CRCT1Q9UGL9 99 aa2.63□□□□□ -1.99
HMBOX1-202ENST00000355231 SPINK1P00995 79 aa2.63□□□□□ -1.99
HMBOX1-202ENST00000355231 PRO2289Q9P1D8 64 aa2.63□□□□□ -1.99
HMBOX1-202ENST00000355231 LRP2P98164 4655 aa2.62□□□□□ -1.99
HMBOX1-202ENST00000355231 FAT4Q6V0I7 4981 aa2.62□□□□□ -1.99
HMBOX1-202ENST00000355231 RNF213Q63HN8 5207 aa2.6□□□□□ -1.99
HMBOX1-202ENST00000355231 MT1HL1P0DM35 61 aa2.6□□□□□ -1.99
HMBOX1-202ENST00000355231 TNXBP22105 4242 aa2.59□□□□□ -1.99
HMBOX1-202ENST00000355231 KRTAP1-4P0C5Y4 121 aa2.59□□□□□ -2
HMBOX1-202ENST00000355231 KRTAP13-2Q52LG2 175 aa2.58□□□□□ -2
HMBOX1-202ENST00000355231 SPINK6Q6UWN8 80 aa2.58□□□□□ -2
HMBOX1-202ENST00000355231 TYMSOSQ8TAI1 123 aa2.58□□□□□ -2
HMBOX1-202ENST00000355231 C10orf95Q9H7T3 257 aa2.55□□□□□ -2
HMBOX1-202ENST00000355231 LPAP08519 4548 aa2.54□□□□□ -2
HMBOX1-202ENST00000355231 INE1O15225 51 aa2.53□□□□□ -2
HMBOX1-202ENST00000355231 KRTAP10-8P60410 259 aa2.53□□□□□ -2
HMBOX1-202ENST00000355231 RPS29P62273 56 aaKnown RBP2.53□□□□□ -2
HMBOX1-202ENST00000355231 S4R3F8 94 aa2.51□□□□□ -2.01
HMBOX1-202ENST00000355231 R4GN34 69 aa2.49□□□□□ -2.01
HMBOX1-202ENST00000355231 PP632Q6XCG6 107 aa2.48□□□□□ -2.01
HMBOX1-202ENST00000355231 KRTAP5-9P26371 169 aa2.47□□□□□ -2.01
HMBOX1-202ENST00000355231 FSIP2Q5CZC0 6907 aa2.47□□□□□ -2.01
HMBOX1-202ENST00000355231 A0A0D9SG42 100 aa2.45□□□□□ -2.02
HMBOX1-202ENST00000355231 KRTAP12-2P59991 146 aa2.42□□□□□ -2.02
HMBOX1-202ENST00000355231 M0QZ58 72 aa2.41□□□□□ -2.02
HMBOX1-202ENST00000355231 KRTAP10-6P60371 365 aaPredicted RBP2.41□□□□□ -2.02
HMBOX1-202ENST00000355231 KRTAP5-11Q6L8G4 156 aa2.41□□□□□ -2.02
HMBOX1-202ENST00000355231 KRTAP12-1P59990 96 aa2.4□□□□□ -2.03
HMBOX1-202ENST00000355231 KRTAP13-4Q3LI77 160 aa2.38□□□□□ -2.03
HMBOX1-202ENST00000355231 C9orf92A6NGG3 77 aa2.37□□□□□ -2.03
HMBOX1-202ENST00000355231 KRTAP5-4Q6L8H1 288 aa2.37□□□□□ -2.03
HMBOX1-202ENST00000355231 MUC17Q685J3 4493 aa2.34□□□□□ -2.03
HMBOX1-202ENST00000355231 SPRR5A0A1B0GTR4 108 aa2.34□□□□□ -2.04
HMBOX1-202ENST00000355231 LCE1AQ5T7P2 110 aa2.33□□□□□ -2.04
HMBOX1-202ENST00000355231 GPR98Q8WXG9 6306 aa2.32□□□□□ -2.04
HMBOX1-202ENST00000355231 SSPOA2VEC9 5147 aa2.32□□□□□ -2.04
HMBOX1-202ENST00000355231 KRTAP4-1Q9BYQ7 146 aa2.32□□□□□ -2.04
HMBOX1-202ENST00000355231 KRTAP10-7P60409 375 aaPredicted RBP2.31□□□□□ -2.04
HMBOX1-202ENST00000355231 KRTAP20-1Q3LI63 56 aa2.3□□□□□ -2.04
HMBOX1-202ENST00000355231 KRTAP5-1Q6L8H4 278 aa2.3□□□□□ -2.04
HMBOX1-202ENST00000355231 NEBP20929 6669 aa2.28□□□□□ -2.05
HMBOX1-202ENST00000355231 KRTAP4-4Q9BYR3 166 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms