RNA–Protein interactions for RNA: ENST00000346085.9

ARID1B-202, Transcript of AT-rich interaction domain 1B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARID1B, Length 10,194 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-202ENST00000346085 KRTAP19-4Q3LI73 84 aa6.79□□□□□ -1.32
ARID1B-202ENST00000346085 LCE3CQ5T5A8 94 aa6.79□□□□□ -1.32
ARID1B-202ENST00000346085 KRTAP10-7P60409 375 aaPredicted RBP6.76□□□□□ -1.33
ARID1B-202ENST00000346085 ANK3Q12955 4377 aaKnown RBP6.75□□□□□ -1.33
ARID1B-202ENST00000346085 MT3P25713 68 aa6.73□□□□□ -1.33
ARID1B-202ENST00000346085 LYSTQ99698 3801 aa6.73□□□□□ -1.33
ARID1B-202ENST00000346085 LORP23490 312 aaPredicted RBP6.72□□□□□ -1.33
ARID1B-202ENST00000346085 DNAH3Q8TD57 4116 aa6.72□□□□□ -1.33
ARID1B-202ENST00000346085 KRTAP10-4P60372 401 aaPredicted RBP6.69□□□□□ -1.34
ARID1B-202ENST00000346085 CMYA5Q8N3K9 4069 aa6.68□□□□□ -1.34
ARID1B-202ENST00000346085 KRTAP4-5Q9BYR2 181 aa6.65□□□□□ -1.35
ARID1B-202ENST00000346085 MT1HL1P0DM35 61 aa6.59□□□□□ -1.35
ARID1B-202ENST00000346085 KRTAP12-4P60329 112 aa6.58□□□□□ -1.36
ARID1B-202ENST00000346085 HECTD4Q9Y4D8 3996 aa6.54□□□□□ -1.36
ARID1B-202ENST00000346085 HUWE1Q7Z6Z7 4374 aaKnown RBP6.5□□□□□ -1.37
ARID1B-202ENST00000346085 KRTAP19-5Q3LI72 72 aa6.49□□□□□ -1.37
ARID1B-202ENST00000346085 SPRR2GQ9BYE4 73 aa6.4□□□□□ -1.38
ARID1B-202ENST00000346085 DNAH7Q8WXX0 4024 aa6.39□□□□□ -1.39
ARID1B-202ENST00000346085 DNAH2Q9P225 4427 aa6.36□□□□□ -1.39
ARID1B-202ENST00000346085 LCE3BQ5TA77 95 aa6.31□□□□□ -1.4
ARID1B-202ENST00000346085 SPRR5A0A1B0GTR4 108 aa6.28□□□□□ -1.4
ARID1B-202ENST00000346085 ANK2Q01484 3957 aa6.27□□□□□ -1.41
ARID1B-202ENST00000346085 DNAH6Q9C0G6 4158 aa6.26□□□□□ -1.41
ARID1B-202ENST00000346085 FRAS1Q86XX4 4008 aa6.23□□□□□ -1.41
ARID1B-202ENST00000346085 KMT2AQ03164 3969 aa6.23□□□□□ -1.41
ARID1B-202ENST00000346085 DNAH1Q9P2D7 4330 aa6.17□□□□□ -1.42
ARID1B-202ENST00000346085 LCE3DQ9BYE3 92 aa6.16□□□□□ -1.42
ARID1B-202ENST00000346085 VPS13BQ7Z7G8 4022 aa6.16□□□□□ -1.42
ARID1B-202ENST00000346085 SPRR2FQ96RM1 72 aa6.14□□□□□ -1.43
ARID1B-202ENST00000346085 LCE3EQ5T5B0 92 aa6.1□□□□□ -1.43
ARID1B-202ENST00000346085 FLGP20930 4061 aaPredicted RBP6□□□□□ -1.45
ARID1B-202ENST00000346085 DNAH10Q8IVF4 4471 aa5.97□□□□□ -1.45
ARID1B-202ENST00000346085 DNAH9Q9NYC9 4486 aa5.96□□□□□ -1.46
ARID1B-202ENST00000346085 MT2AP02795 61 aa5.91□□□□□ -1.46
ARID1B-202ENST00000346085 MT1HP80294 61 aa5.89□□□□□ -1.47
ARID1B-202ENST00000346085 KRTAP4-1Q9BYQ7 146 aa5.88□□□□□ -1.47
ARID1B-202ENST00000346085 PRKDCP78527 4128 aaKnown RBP5.84□□□□□ -1.47
ARID1B-202ENST00000346085 PRM1P04553 51 aa5.84□□□□□ -1.47
ARID1B-202ENST00000346085 MT1GP13640 62 aa5.83□□□□□ -1.48
ARID1B-202ENST00000346085 FAT2Q9NYQ8 4349 aa5.8□□□□□ -1.48
ARID1B-202ENST00000346085 DNAH11Q96DT5 4516 aa5.79□□□□□ -1.48
ARID1B-202ENST00000346085 DYNC2H1Q8NCM8 4307 aaKnown RBP5.76□□□□□ -1.49
ARID1B-202ENST00000346085 MT1FP04733 61 aa5.74□□□□□ -1.49
ARID1B-202ENST00000346085 SPRR2EP22531 72 aa5.73□□□□□ -1.49
ARID1B-202ENST00000346085 SPRR2BP35325 72 aa5.73□□□□□ -1.49
ARID1B-202ENST00000346085 SPRR2AP35326 72 aa5.73□□□□□ -1.49
ARID1B-202ENST00000346085 VPS13DQ5THJ4 4388 aa5.72□□□□□ -1.49
ARID1B-202ENST00000346085 STARD9Q9P2P6 4700 aa5.7□□□□□ -1.5
ARID1B-202ENST00000346085 PLECQ15149 4684 aaKnown RBP5.65□□□□□ -1.5
ARID1B-202ENST00000346085 DNAH8Q96JB1 4490 aa5.62□□□□□ -1.51
ARID1B-202ENST00000346085 KRTAP19-8Q3LI54 63 aa5.61□□□□□ -1.51
ARID1B-202ENST00000346085 LCE2BO14633 110 aa5.6□□□□□ -1.51
ARID1B-202ENST00000346085 MT1XP80297 61 aa5.59□□□□□ -1.51
ARID1B-202ENST00000346085 DNAH17Q9UFH2 4485 aa5.58□□□□□ -1.52
ARID1B-202ENST00000346085 SPRR2DP22532 72 aa5.53□□□□□ -1.52
ARID1B-202ENST00000346085 DNAH5Q8TE73 4624 aa5.49□□□□□ -1.53
ARID1B-202ENST00000346085 MT1LQ93083 61 aa5.49□□□□□ -1.53
ARID1B-202ENST00000346085 KRTAP19-1Q8IUB9 90 aa5.45□□□□□ -1.54
ARID1B-202ENST00000346085 PKHD1P08F94 4074 aa5.36□□□□□ -1.55
ARID1B-202ENST00000346085 LRP1Q07954 4544 aaKnown RBP5.33□□□□□ -1.56
ARID1B-202ENST00000346085 LRP1BQ9NZR2 4599 aa5.32□□□□□ -1.56
ARID1B-202ENST00000346085 PKHD1L1Q86WI1 4243 aa5.31□□□□□ -1.56
ARID1B-202ENST00000346085 KRTAP19-3Q7Z4W3 81 aa5.25□□□□□ -1.57
ARID1B-202ENST00000346085 LCE2CQ5TA81 110 aa5.22□□□□□ -1.57
ARID1B-202ENST00000346085 KRTAP4-8A0A0G2JLE6 195 aa5.21□□□□□ -1.58
ARID1B-202ENST00000346085 KRTAP4-8Q9BYQ9 185 aa5.21□□□□□ -1.58
ARID1B-202ENST00000346085 PKD1P98161 4303 aa5.2□□□□□ -1.58
ARID1B-202ENST00000346085 MT1EP04732 61 aa5.19□□□□□ -1.58
ARID1B-202ENST00000346085 MT1BP07438 61 aa5.15□□□□□ -1.59
ARID1B-202ENST00000346085 DYNC1H1Q14204 4646 aaKnown RBP5.15□□□□□ -1.59
ARID1B-202ENST00000346085 FAT1Q14517 4588 aa5.13□□□□□ -1.59
ARID1B-202ENST00000346085 MT4P47944 62 aa5.12□□□□□ -1.59
ARID1B-202ENST00000346085 KRTAP2-3P0C7H8 128 aa5.09□□□□□ -1.59
ARID1B-202ENST00000346085 LCE1BQ5T7P3 118 aa5.09□□□□□ -1.59
ARID1B-202ENST00000346085 KRTAP2-4Q9BYR9 128 aa5.09□□□□□ -1.59
ARID1B-202ENST00000346085 KRTAP2-1Q9BYU5 128 aa5.09□□□□□ -1.59
ARID1B-202ENST00000346085 TNXBP22105 4242 aa5.08□□□□□ -1.6
ARID1B-202ENST00000346085 LCE2DQ5TA82 110 aaPredicted RBP5.07□□□□□ -1.6
ARID1B-202ENST00000346085 LCE1DQ5T752 114 aa5.07□□□□□ -1.6
ARID1B-202ENST00000346085 APOBP04114 4563 aaKnown RBP5.05□□□□□ -1.6
ARID1B-202ENST00000346085 SACSQ9NZJ4 4579 aa5.04□□□□□ -1.6
ARID1B-202ENST00000346085 KRTAP4-7Q9BYR0 210 aa5.04□□□□□ -1.6
ARID1B-202ENST00000346085 HSPG2P98160 4391 aa4.99□□□□□ -1.61
ARID1B-202ENST00000346085 MT1AP04731 61 aa4.99□□□□□ -1.61
ARID1B-202ENST00000346085 KRTAP17-1Q9BYP8 105 aa4.96□□□□□ -1.61
ARID1B-202ENST00000346085 MT1MQ8N339 61 aa4.96□□□□□ -1.61
ARID1B-202ENST00000346085 FAT3Q8TDW7 4589 aa4.93□□□□□ -1.62
ARID1B-202ENST00000346085 KRTAP9-8Q9BYQ0 159 aa4.9□□□□□ -1.63
ARID1B-202ENST00000346085 KRTAP6-2Q3LI66 62 aa4.89□□□□□ -1.63
ARID1B-202ENST00000346085 MYCBP2O75592 4640 aa4.89□□□□□ -1.63
ARID1B-202ENST00000346085 LOC100996750A0A140TA64 210 aa4.88□□□□□ -1.63
ARID1B-202ENST00000346085 DNHD1Q96M86 4753 aa4.82□□□□□ -1.64
ARID1B-202ENST00000346085 KRTAP9-3Q9BYQ3 159 aa4.82□□□□□ -1.64
ARID1B-202ENST00000346085 LPAP08519 4548 aa4.73□□□□□ -1.65
ARID1B-202ENST00000346085 KRTAP4-9Q9BYQ8 210 aa4.73□□□□□ -1.65
ARID1B-202ENST00000346085 LCE5AQ5TCM9 118 aa4.69□□□□□ -1.66
ARID1B-202ENST00000346085 RYR1P21817 5038 aa4.69□□□□□ -1.66
ARID1B-202ENST00000346085 KRTAP4-3Q9BYR4 195 aa4.69□□□□□ -1.66
ARID1B-202ENST00000346085 RYR3Q15413 4870 aa4.66□□□□□ -1.66
ARID1B-202ENST00000346085 KRTAP2-2Q9BYT5 123 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms