RNA–Protein interactions for RNA: ENST00000340635.10

PDE4D-203, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 8,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-203ENST00000340635 FRAS1Q86XX4 4008 aa5.93□□□□□ -1.46
PDE4D-203ENST00000340635 KRTAP3-3Q9BYR6 98 aa5.91□□□□□ -1.46
PDE4D-203ENST00000340635 KMT2AQ03164 3969 aa5.83□□□□□ -1.48
PDE4D-203ENST00000340635 CMYA5Q8N3K9 4069 aa5.82□□□□□ -1.48
PDE4D-203ENST00000340635 HUWE1Q7Z6Z7 4374 aaKnown RBP5.81□□□□□ -1.48
PDE4D-203ENST00000340635 LORP23490 312 aaPredicted RBP5.79□□□□□ -1.48
PDE4D-203ENST00000340635 DNAH7Q8WXX0 4024 aa5.76□□□□□ -1.49
PDE4D-203ENST00000340635 DNAH3Q8TD57 4116 aa5.76□□□□□ -1.49
PDE4D-203ENST00000340635 ALMS1Q8TCU4 4167 aa5.73□□□□□ -1.49
PDE4D-203ENST00000340635 MT1HL1P0DM35 61 aa5.73□□□□□ -1.49
PDE4D-203ENST00000340635 VPS13BQ7Z7G8 4022 aa5.72□□□□□ -1.49
PDE4D-203ENST00000340635 ANK2Q01484 3957 aa5.72□□□□□ -1.49
PDE4D-203ENST00000340635 DNAH2Q9P225 4427 aa5.64□□□□□ -1.51
PDE4D-203ENST00000340635 KRTAP10-7P60409 375 aaPredicted RBP5.63□□□□□ -1.51
PDE4D-203ENST00000340635 DNAH1Q9P2D7 4330 aa5.62□□□□□ -1.51
PDE4D-203ENST00000340635 HECTD4Q9Y4D8 3996 aa5.61□□□□□ -1.51
PDE4D-203ENST00000340635 KRTAP4-5Q9BYR2 181 aa5.5□□□□□ -1.53
PDE4D-203ENST00000340635 SPRR2FQ96RM1 72 aa5.46□□□□□ -1.54
PDE4D-203ENST00000340635 DNAH6Q9C0G6 4158 aa5.35□□□□□ -1.55
PDE4D-203ENST00000340635 PRKDCP78527 4128 aaKnown RBP5.33□□□□□ -1.56
PDE4D-203ENST00000340635 LCE3CQ5T5A8 94 aa5.32□□□□□ -1.56
PDE4D-203ENST00000340635 KRTAP10-4P60372 401 aaPredicted RBP5.32□□□□□ -1.56
PDE4D-203ENST00000340635 KRTAP19-5Q3LI72 72 aa5.32□□□□□ -1.56
PDE4D-203ENST00000340635 DNAH9Q9NYC9 4486 aa5.27□□□□□ -1.57
PDE4D-203ENST00000340635 DNAH10Q8IVF4 4471 aa5.26□□□□□ -1.57
PDE4D-203ENST00000340635 KRTAP19-4Q3LI73 84 aa5.24□□□□□ -1.57
PDE4D-203ENST00000340635 FAT2Q9NYQ8 4349 aa5.23□□□□□ -1.57
PDE4D-203ENST00000340635 MT1HP80294 61 aa5.2□□□□□ -1.58
PDE4D-203ENST00000340635 LCE3BQ5TA77 95 aa5.19□□□□□ -1.58
PDE4D-203ENST00000340635 SPRR2EP22531 72 aa5.17□□□□□ -1.58
PDE4D-203ENST00000340635 SPRR2BP35325 72 aa5.17□□□□□ -1.58
PDE4D-203ENST00000340635 SPRR2AP35326 72 aa5.17□□□□□ -1.58
PDE4D-203ENST00000340635 SPRR2GQ9BYE4 73 aa5.15□□□□□ -1.58
PDE4D-203ENST00000340635 FLGP20930 4061 aaPredicted RBP5.15□□□□□ -1.58
PDE4D-203ENST00000340635 MT2AP02795 61 aa5.09□□□□□ -1.59
PDE4D-203ENST00000340635 VPS13DQ5THJ4 4388 aa5.06□□□□□ -1.6
PDE4D-203ENST00000340635 DYNC2H1Q8NCM8 4307 aaKnown RBP5.05□□□□□ -1.6
PDE4D-203ENST00000340635 KRTAP12-4P60329 112 aa5.04□□□□□ -1.6
PDE4D-203ENST00000340635 SPRR2DP22532 72 aa5.01□□□□□ -1.61
PDE4D-203ENST00000340635 KRTAP4-1Q9BYQ7 146 aa4.99□□□□□ -1.61
PDE4D-203ENST00000340635 DNAH8Q96JB1 4490 aa4.96□□□□□ -1.61
PDE4D-203ENST00000340635 LCE2BO14633 110 aa4.96□□□□□ -1.62
PDE4D-203ENST00000340635 MT1FP04733 61 aa4.96□□□□□ -1.62
PDE4D-203ENST00000340635 DNAH11Q96DT5 4516 aa4.93□□□□□ -1.62
PDE4D-203ENST00000340635 PKHD1P08F94 4074 aa4.93□□□□□ -1.62
PDE4D-203ENST00000340635 STARD9Q9P2P6 4700 aa4.92□□□□□ -1.62
PDE4D-203ENST00000340635 MT1GP13640 62 aa4.9□□□□□ -1.62
PDE4D-203ENST00000340635 DNAH17Q9UFH2 4485 aa4.9□□□□□ -1.63
PDE4D-203ENST00000340635 LCE3DQ9BYE3 92 aa4.87□□□□□ -1.63
PDE4D-203ENST00000340635 PKHD1L1Q86WI1 4243 aa4.84□□□□□ -1.63
PDE4D-203ENST00000340635 PLECQ15149 4684 aaKnown RBP4.82□□□□□ -1.64
PDE4D-203ENST00000340635 LCE3EQ5T5B0 92 aa4.77□□□□□ -1.65
PDE4D-203ENST00000340635 LCE2CQ5TA81 110 aa4.71□□□□□ -1.66
PDE4D-203ENST00000340635 PKD1P98161 4303 aa4.67□□□□□ -1.66
PDE4D-203ENST00000340635 LRP1BQ9NZR2 4599 aa4.64□□□□□ -1.67
PDE4D-203ENST00000340635 KRTAP19-8Q3LI54 63 aa4.63□□□□□ -1.67
PDE4D-203ENST00000340635 SPRR5A0A1B0GTR4 108 aa4.62□□□□□ -1.67
PDE4D-203ENST00000340635 LCE2DQ5TA82 110 aaPredicted RBP4.61□□□□□ -1.67
PDE4D-203ENST00000340635 DNAH5Q8TE73 4624 aa4.6□□□□□ -1.67
PDE4D-203ENST00000340635 MT1XP80297 61 aa4.57□□□□□ -1.68
PDE4D-203ENST00000340635 TNXBP22105 4242 aa4.56□□□□□ -1.68
PDE4D-203ENST00000340635 FAT1Q14517 4588 aa4.55□□□□□ -1.68
PDE4D-203ENST00000340635 KRTAP19-1Q8IUB9 90 aa4.53□□□□□ -1.68
PDE4D-203ENST00000340635 PRM1P04553 51 aa4.48□□□□□ -1.69
PDE4D-203ENST00000340635 FAT3Q8TDW7 4589 aa4.48□□□□□ -1.69
PDE4D-203ENST00000340635 KRTAP17-1Q9BYP8 105 aa4.48□□□□□ -1.69
PDE4D-203ENST00000340635 KRTAP4-8A0A0G2JLE6 195 aa4.47□□□□□ -1.69
PDE4D-203ENST00000340635 KRTAP4-8Q9BYQ9 185 aa4.47□□□□□ -1.69
PDE4D-203ENST00000340635 MT4P47944 62 aa4.47□□□□□ -1.69
PDE4D-203ENST00000340635 LCE1BQ5T7P3 118 aa4.46□□□□□ -1.7
PDE4D-203ENST00000340635 LRP1Q07954 4544 aaKnown RBP4.45□□□□□ -1.7
PDE4D-203ENST00000340635 MT3P25713 68 aa4.42□□□□□ -1.7
PDE4D-203ENST00000340635 HSPG2P98160 4391 aa4.42□□□□□ -1.7
PDE4D-203ENST00000340635 APOBP04114 4563 aaKnown RBP4.41□□□□□ -1.7
PDE4D-203ENST00000340635 LCE1DQ5T752 114 aa4.4□□□□□ -1.7
PDE4D-203ENST00000340635 KRTAP19-3Q7Z4W3 81 aa4.4□□□□□ -1.7
PDE4D-203ENST00000340635 DYNC1H1Q14204 4646 aaKnown RBP4.37□□□□□ -1.71
PDE4D-203ENST00000340635 MT1LQ93083 61 aa4.36□□□□□ -1.71
PDE4D-203ENST00000340635 MT1BP07438 61 aa4.35□□□□□ -1.71
PDE4D-203ENST00000340635 LPAP08519 4548 aa4.32□□□□□ -1.72
PDE4D-203ENST00000340635 SACSQ9NZJ4 4579 aa4.31□□□□□ -1.72
PDE4D-203ENST00000340635 MYCBP2O75592 4640 aa4.26□□□□□ -1.73
PDE4D-203ENST00000340635 KRTAP4-7Q9BYR0 210 aa4.25□□□□□ -1.73
PDE4D-203ENST00000340635 KRTAP9-8Q9BYQ0 159 aa4.24□□□□□ -1.73
PDE4D-203ENST00000340635 KRTAP9-2Q9BYQ4 174 aa4.23□□□□□ -1.73
PDE4D-203ENST00000340635 LCE5AQ5TCM9 118 aa4.21□□□□□ -1.74
PDE4D-203ENST00000340635 MT1EP04732 61 aa4.18□□□□□ -1.74
PDE4D-203ENST00000340635 KRTAP9-3Q9BYQ3 159 aa4.17□□□□□ -1.74
PDE4D-203ENST00000340635 MT1MQ8N339 61 aa4.12□□□□□ -1.75
PDE4D-203ENST00000340635 LOC100996750A0A140TA64 210 aa4.11□□□□□ -1.75
PDE4D-203ENST00000340635 KRTAP9-6A0A140TA67 174 aa4.1□□□□□ -1.75
PDE4D-203ENST00000340635 LCE1CQ5T751 118 aa4.01□□□□□ -1.77
PDE4D-203ENST00000340635 LCE1EQ5T753 118 aa4.01□□□□□ -1.77
PDE4D-203ENST00000340635 LCE1FQ5T754 118 aa4.01□□□□□ -1.77
PDE4D-203ENST00000340635 LCE1AQ5T7P2 110 aa4.01□□□□□ -1.77
PDE4D-203ENST00000340635 LRP2P98164 4655 aa3.95□□□□□ -1.78
PDE4D-203ENST00000340635 KRTAP4-3Q9BYR4 195 aa3.95□□□□□ -1.78
PDE4D-203ENST00000340635 KRTAP20-1Q3LI63 56 aa3.94□□□□□ -1.78
PDE4D-203ENST00000340635 KRTAP19-6Q3LI70 58 aa3.93□□□□□ -1.78
PDE4D-203ENST00000340635 DNHD1Q96M86 4753 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms