RNA–Protein interactions for RNA: ENST00000339717.11

BRPF3-201, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5 BASIC

Gene BRPF3, Length 4,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-201ENST00000339717 KRTAP4-5Q9BYR2 181 aa5.03□□□□□ -1.6
BRPF3-201ENST00000339717 ZNF469Q96JG9 3925 aaPredicted RBP4.97□□□□□ -1.61
BRPF3-201ENST00000339717 KRTAP10-5P60370 271 aa4.95□□□□□ -1.62
BRPF3-201ENST00000339717 KRTAP8-1Q8IUC2 63 aa4.94□□□□□ -1.62
BRPF3-201ENST00000339717 LCE2DQ5TA82 110 aaPredicted RBP4.92□□□□□ -1.62
BRPF3-201ENST00000339717 DNAH9Q9NYC9 4486 aa4.88□□□□□ -1.63
BRPF3-201ENST00000339717 AKAP9Q99996 3911 aa4.85□□□□□ -1.63
BRPF3-201ENST00000339717 DNAH11Q96DT5 4516 aa4.83□□□□□ -1.64
BRPF3-201ENST00000339717 DNAH10Q8IVF4 4471 aa4.83□□□□□ -1.64
BRPF3-201ENST00000339717 DNAH1Q9P2D7 4330 aa4.79□□□□□ -1.64
BRPF3-201ENST00000339717 LCE3CQ5T5A8 94 aa4.79□□□□□ -1.64
BRPF3-201ENST00000339717 DNAH5Q8TE73 4624 aa4.78□□□□□ -1.64
BRPF3-201ENST00000339717 KRTAP19-4Q3LI73 84 aa4.77□□□□□ -1.65
BRPF3-201ENST00000339717 DNAH8Q96JB1 4490 aa4.75□□□□□ -1.65
BRPF3-201ENST00000339717 PLECQ15149 4684 aaKnown RBP4.73□□□□□ -1.65
BRPF3-201ENST00000339717 CRCT1Q9UGL9 99 aa4.72□□□□□ -1.65
BRPF3-201ENST00000339717 DNAH2Q9P225 4427 aa4.72□□□□□ -1.65
BRPF3-201ENST00000339717 CSMD3Q7Z407 3707 aa4.71□□□□□ -1.66
BRPF3-201ENST00000339717 VPS13DQ5THJ4 4388 aa4.69□□□□□ -1.66
BRPF3-201ENST00000339717 DNAH17Q9UFH2 4485 aa4.66□□□□□ -1.66
BRPF3-201ENST00000339717 LCE2CQ5TA81 110 aa4.65□□□□□ -1.66
BRPF3-201ENST00000339717 SPRR2GQ9BYE4 73 aa4.65□□□□□ -1.66
BRPF3-201ENST00000339717 KRTAP12-4P60329 112 aa4.65□□□□□ -1.67
BRPF3-201ENST00000339717 DNHD1Q96M86 4753 aa4.63□□□□□ -1.67
BRPF3-201ENST00000339717 KRTAP4-1Q9BYQ7 146 aa4.63□□□□□ -1.67
BRPF3-201ENST00000339717 DYNC1H1Q14204 4646 aaKnown RBP4.61□□□□□ -1.67
BRPF3-201ENST00000339717 FAT1Q14517 4588 aa4.59□□□□□ -1.67
BRPF3-201ENST00000339717 MT1HP80294 61 aa4.58□□□□□ -1.68
BRPF3-201ENST00000339717 LCE2BO14633 110 aa4.57□□□□□ -1.68
BRPF3-201ENST00000339717 KRTAP19-5Q3LI72 72 aa4.51□□□□□ -1.69
BRPF3-201ENST00000339717 LCE2AQ5TA79 106 aaPredicted RBP4.51□□□□□ -1.69
BRPF3-201ENST00000339717 LRP1BQ9NZR2 4599 aa4.51□□□□□ -1.69
BRPF3-201ENST00000339717 DYNC2H1Q8NCM8 4307 aaKnown RBP4.51□□□□□ -1.69
BRPF3-201ENST00000339717 MT2AP02795 61 aa4.5□□□□□ -1.69
BRPF3-201ENST00000339717 RYR1P21817 5038 aa4.5□□□□□ -1.69
BRPF3-201ENST00000339717 FAT2Q9NYQ8 4349 aa4.47□□□□□ -1.69
BRPF3-201ENST00000339717 SACSQ9NZJ4 4579 aa4.47□□□□□ -1.69
BRPF3-201ENST00000339717 STARD9Q9P2P6 4700 aa4.42□□□□□ -1.7
BRPF3-201ENST00000339717 DNAH3Q8TD57 4116 aa4.41□□□□□ -1.7
BRPF3-201ENST00000339717 MT1FP04733 61 aa4.39□□□□□ -1.71
BRPF3-201ENST00000339717 ANK2Q01484 3957 aa4.38□□□□□ -1.71
BRPF3-201ENST00000339717 DNAH6Q9C0G6 4158 aa4.36□□□□□ -1.71
BRPF3-201ENST00000339717 PRKDCP78527 4128 aaKnown RBP4.32□□□□□ -1.72
BRPF3-201ENST00000339717 APOBP04114 4563 aaKnown RBP4.31□□□□□ -1.72
BRPF3-201ENST00000339717 KIAA1109Q2LD37 5005 aa4.3□□□□□ -1.72
BRPF3-201ENST00000339717 RYR2Q92736 4967 aa4.29□□□□□ -1.72
BRPF3-201ENST00000339717 RYR3Q15413 4870 aa4.28□□□□□ -1.72
BRPF3-201ENST00000339717 CMYA5Q8N3K9 4069 aa4.28□□□□□ -1.72
BRPF3-201ENST00000339717 KRTAP19-8Q3LI54 63 aa4.26□□□□□ -1.73
BRPF3-201ENST00000339717 KMT2AQ03164 3969 aa4.26□□□□□ -1.73
BRPF3-201ENST00000339717 LCE3EQ5T5B0 92 aa4.24□□□□□ -1.73
BRPF3-201ENST00000339717 MYCBP2O75592 4640 aa4.24□□□□□ -1.73
BRPF3-201ENST00000339717 KRTAP19-1Q8IUB9 90 aa4.23□□□□□ -1.73
BRPF3-201ENST00000339717 KRTAP17-1Q9BYP8 105 aa4.23□□□□□ -1.73
BRPF3-201ENST00000339717 KRTAP10-7P60409 375 aaPredicted RBP4.22□□□□□ -1.73
BRPF3-201ENST00000339717 FAT3Q8TDW7 4589 aa4.21□□□□□ -1.74
BRPF3-201ENST00000339717 HERC1Q15751 4861 aa4.21□□□□□ -1.74
BRPF3-201ENST00000339717 MT3P25713 68 aa4.21□□□□□ -1.74
BRPF3-201ENST00000339717 LCE3DQ9BYE3 92 aa4.21□□□□□ -1.74
BRPF3-201ENST00000339717 LYSTQ99698 3801 aa4.2□□□□□ -1.74
BRPF3-201ENST00000339717 SPRR2FQ96RM1 72 aa4.19□□□□□ -1.74
BRPF3-201ENST00000339717 HSPG2P98160 4391 aa4.17□□□□□ -1.74
BRPF3-201ENST00000339717 VPS13BQ7Z7G8 4022 aa4.17□□□□□ -1.74
BRPF3-201ENST00000339717 MT1XP80297 61 aa4.16□□□□□ -1.74
BRPF3-201ENST00000339717 KRTAP2-3P0C7H8 128 aa4.16□□□□□ -1.74
BRPF3-201ENST00000339717 KRTAP2-4Q9BYR9 128 aa4.16□□□□□ -1.74
BRPF3-201ENST00000339717 KRTAP2-1Q9BYU5 128 aa4.16□□□□□ -1.74
BRPF3-201ENST00000339717 BIRC6Q9NR09 4857 aa4.15□□□□□ -1.75
BRPF3-201ENST00000339717 LRP1Q07954 4544 aaKnown RBP4.14□□□□□ -1.75
BRPF3-201ENST00000339717 PRM1P04553 51 aa4.13□□□□□ -1.75
BRPF3-201ENST00000339717 FRAS1Q86XX4 4008 aa4.13□□□□□ -1.75
BRPF3-201ENST00000339717 DNAH7Q8WXX0 4024 aa4.13□□□□□ -1.75
BRPF3-201ENST00000339717 LCE3BQ5TA77 95 aa4.12□□□□□ -1.75
BRPF3-201ENST00000339717 HECTD4Q9Y4D8 3996 aa4.11□□□□□ -1.75
BRPF3-201ENST00000339717 KRTAP9-8Q9BYQ0 159 aa4.07□□□□□ -1.76
BRPF3-201ENST00000339717 HERC2O95714 4834 aa4.05□□□□□ -1.76
BRPF3-201ENST00000339717 MT1BP07438 61 aa4.04□□□□□ -1.76
BRPF3-201ENST00000339717 KRTAP9-3Q9BYQ3 159 aa4□□□□□ -1.77
BRPF3-201ENST00000339717 HYDINQ4G0P3 5121 aa3.99□□□□□ -1.77
BRPF3-201ENST00000339717 PKD1P98161 4303 aa3.98□□□□□ -1.77
BRPF3-201ENST00000339717 MT1GP13640 62 aa3.98□□□□□ -1.77
BRPF3-201ENST00000339717 LRP2P98164 4655 aa3.96□□□□□ -1.78
BRPF3-201ENST00000339717 PKHD1L1Q86WI1 4243 aa3.95□□□□□ -1.78
BRPF3-201ENST00000339717 MT1LQ93083 61 aa3.95□□□□□ -1.78
BRPF3-201ENST00000339717 SPRR2EP22531 72 aa3.93□□□□□ -1.78
BRPF3-201ENST00000339717 SPRR2BP35325 72 aa3.93□□□□□ -1.78
BRPF3-201ENST00000339717 SPRR2AP35326 72 aa3.93□□□□□ -1.78
BRPF3-201ENST00000339717 PKHD1P08F94 4074 aa3.91□□□□□ -1.78
BRPF3-201ENST00000339717 PCLOQ9Y6V0 5065 aa3.91□□□□□ -1.78
BRPF3-201ENST00000339717 KRTAP4-8A0A0G2JLE6 195 aa3.89□□□□□ -1.79
BRPF3-201ENST00000339717 KRTAP4-8Q9BYQ9 185 aa3.89□□□□□ -1.79
BRPF3-201ENST00000339717 KRTAP19-2Q3LHN2 52 aa3.88□□□□□ -1.79
BRPF3-201ENST00000339717 SPRR2DP22532 72 aa3.82□□□□□ -1.8
BRPF3-201ENST00000339717 MT1EP04732 61 aa3.81□□□□□ -1.8
BRPF3-201ENST00000339717 KRTAP4-7Q9BYR0 210 aa3.81□□□□□ -1.8
BRPF3-201ENST00000339717 EPPK1P58107 5090 aaKnown RBP3.77□□□□□ -1.81
BRPF3-201ENST00000339717 KMT2CQ8NEZ4 4911 aaKnown RBP3.74□□□□□ -1.81
BRPF3-201ENST00000339717 MUC17Q685J3 4493 aa3.72□□□□□ -1.81
BRPF3-201ENST00000339717 KRTAP19-6Q3LI70 58 aa3.72□□□□□ -1.81
BRPF3-201ENST00000339717 KRTAP19-3Q7Z4W3 81 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms