RNA–Protein interactions for RNA: ENST00000337273.9

TNPO1-201, Transcript of transportin 1, humanhuman

TSL 1 (best) BASIC

Gene TNPO1, Length 11,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-201ENST00000337273 KRTAP4-5Q9BYR2 181 aa3.48□□□□□ -1.85
TNPO1-201ENST00000337273 ANK2Q01484 3957 aa3.46□□□□□ -1.86
TNPO1-201ENST00000337273 ZNF469Q96JG9 3925 aaPredicted RBP3.45□□□□□ -1.86
TNPO1-201ENST00000337273 LCE3AQ5TA76 89 aa3.44□□□□□ -1.86
TNPO1-201ENST00000337273 DNAH7Q8WXX0 4024 aa3.43□□□□□ -1.86
TNPO1-201ENST00000337273 KRTAP10-5P60370 271 aa3.43□□□□□ -1.86
TNPO1-201ENST00000337273 DNAH3Q8TD57 4116 aa3.42□□□□□ -1.86
TNPO1-201ENST00000337273 KRTAP10-4P60372 401 aaPredicted RBP3.41□□□□□ -1.86
TNPO1-201ENST00000337273 DNAH2Q9P225 4427 aa3.38□□□□□ -1.87
TNPO1-201ENST00000337273 ANK3Q12955 4377 aaKnown RBP3.38□□□□□ -1.87
TNPO1-201ENST00000337273 CMYA5Q8N3K9 4069 aa3.35□□□□□ -1.87
TNPO1-201ENST00000337273 HUWE1Q7Z6Z7 4374 aaKnown RBP3.32□□□□□ -1.88
TNPO1-201ENST00000337273 KRTAP19-4Q3LI73 84 aa3.31□□□□□ -1.88
TNPO1-201ENST00000337273 VPS13BQ7Z7G8 4022 aa3.3□□□□□ -1.88
TNPO1-201ENST00000337273 KMT2AQ03164 3969 aa3.23□□□□□ -1.89
TNPO1-201ENST00000337273 KRTAP4-1Q9BYQ7 146 aa3.22□□□□□ -1.89
TNPO1-201ENST00000337273 KRTAP8-1Q8IUC2 63 aa3.22□□□□□ -1.89
TNPO1-201ENST00000337273 SPRR2GQ9BYE4 73 aa3.2□□□□□ -1.9
TNPO1-201ENST00000337273 DNAH10Q8IVF4 4471 aa3.19□□□□□ -1.9
TNPO1-201ENST00000337273 DNAH17Q9UFH2 4485 aa3.13□□□□□ -1.91
TNPO1-201ENST00000337273 DNAH1Q9P2D7 4330 aa3.11□□□□□ -1.91
TNPO1-201ENST00000337273 DNAH6Q9C0G6 4158 aa3.1□□□□□ -1.91
TNPO1-201ENST00000337273 FRAS1Q86XX4 4008 aa3.1□□□□□ -1.91
TNPO1-201ENST00000337273 VPS13DQ5THJ4 4388 aa3.09□□□□□ -1.91
TNPO1-201ENST00000337273 LCE3CQ5T5A8 94 aa3.09□□□□□ -1.92
TNPO1-201ENST00000337273 KRTAP19-5Q3LI72 72 aa3.08□□□□□ -1.92
TNPO1-201ENST00000337273 MT1HP80294 61 aa3.08□□□□□ -1.92
TNPO1-201ENST00000337273 DNAH11Q96DT5 4516 aa3.08□□□□□ -1.92
TNPO1-201ENST00000337273 DNAH9Q9NYC9 4486 aa3.05□□□□□ -1.92
TNPO1-201ENST00000337273 KRTAP10-7P60409 375 aaPredicted RBP3.04□□□□□ -1.92
TNPO1-201ENST00000337273 MT2AP02795 61 aa3.03□□□□□ -1.92
TNPO1-201ENST00000337273 LCE3BQ5TA77 95 aa3.01□□□□□ -1.93
TNPO1-201ENST00000337273 KRTAP17-1Q9BYP8 105 aa3□□□□□ -1.93
TNPO1-201ENST00000337273 PKHD1P08F94 4074 aa2.99□□□□□ -1.93
TNPO1-201ENST00000337273 DNAH8Q96JB1 4490 aa2.99□□□□□ -1.93
TNPO1-201ENST00000337273 DNAH5Q8TE73 4624 aa2.99□□□□□ -1.93
TNPO1-201ENST00000337273 PRKDCP78527 4128 aaKnown RBP2.99□□□□□ -1.93
TNPO1-201ENST00000337273 MT1FP04733 61 aa2.95□□□□□ -1.94
TNPO1-201ENST00000337273 STARD9Q9P2P6 4700 aa2.93□□□□□ -1.94
TNPO1-201ENST00000337273 SACSQ9NZJ4 4579 aa2.93□□□□□ -1.94
TNPO1-201ENST00000337273 KRTAP19-8Q3LI54 63 aa2.92□□□□□ -1.94
TNPO1-201ENST00000337273 SPRR5A0A1B0GTR4 108 aa2.91□□□□□ -1.94
TNPO1-201ENST00000337273 PLECQ15149 4684 aaKnown RBP2.9□□□□□ -1.94
TNPO1-201ENST00000337273 KRTAP4-7Q9BYR0 210 aa2.9□□□□□ -1.94
TNPO1-201ENST00000337273 SPRR2FQ96RM1 72 aa2.9□□□□□ -1.95
TNPO1-201ENST00000337273 MT1GP13640 62 aa2.88□□□□□ -1.95
TNPO1-201ENST00000337273 DYNC2H1Q8NCM8 4307 aaKnown RBP2.87□□□□□ -1.95
TNPO1-201ENST00000337273 FAT1Q14517 4588 aa2.87□□□□□ -1.95
TNPO1-201ENST00000337273 FAT2Q9NYQ8 4349 aa2.86□□□□□ -1.95
TNPO1-201ENST00000337273 FLGP20930 4061 aaPredicted RBP2.85□□□□□ -1.95
TNPO1-201ENST00000337273 LRP1BQ9NZR2 4599 aa2.84□□□□□ -1.96
TNPO1-201ENST00000337273 KRTAP19-1Q8IUB9 90 aa2.82□□□□□ -1.96
TNPO1-201ENST00000337273 KRTAP12-4P60329 112 aa2.8□□□□□ -1.96
TNPO1-201ENST00000337273 LOC100996750A0A140TA64 210 aa2.8□□□□□ -1.96
TNPO1-201ENST00000337273 KRTAP4-8A0A0G2JLE6 195 aa2.8□□□□□ -1.96
TNPO1-201ENST00000337273 KRTAP4-8Q9BYQ9 185 aa2.8□□□□□ -1.96
TNPO1-201ENST00000337273 PKD1P98161 4303 aa2.8□□□□□ -1.96
TNPO1-201ENST00000337273 MT1XP80297 61 aa2.77□□□□□ -1.97
TNPO1-201ENST00000337273 PKHD1L1Q86WI1 4243 aa2.77□□□□□ -1.97
TNPO1-201ENST00000337273 DYNC1H1Q14204 4646 aaKnown RBP2.76□□□□□ -1.97
TNPO1-201ENST00000337273 HSPG2P98160 4391 aa2.75□□□□□ -1.97
TNPO1-201ENST00000337273 KRTAP4-9Q9BYQ8 210 aa2.75□□□□□ -1.97
TNPO1-201ENST00000337273 DNHD1Q96M86 4753 aa2.75□□□□□ -1.97
TNPO1-201ENST00000337273 LCE3DQ9BYE3 92 aa2.74□□□□□ -1.97
TNPO1-201ENST00000337273 MYCBP2O75592 4640 aa2.74□□□□□ -1.97
TNPO1-201ENST00000337273 KRTAP4-3Q9BYR4 195 aa2.73□□□□□ -1.97
TNPO1-201ENST00000337273 SPRR2EP22531 72 aa2.72□□□□□ -1.97
TNPO1-201ENST00000337273 SPRR2BP35325 72 aa2.72□□□□□ -1.97
TNPO1-201ENST00000337273 SPRR2AP35326 72 aa2.72□□□□□ -1.97
TNPO1-201ENST00000337273 APOBP04114 4563 aaKnown RBP2.71□□□□□ -1.98
TNPO1-201ENST00000337273 LCE3EQ5T5B0 92 aa2.71□□□□□ -1.98
TNPO1-201ENST00000337273 MT1BP07438 61 aa2.71□□□□□ -1.98
TNPO1-201ENST00000337273 LCE2BO14633 110 aa2.69□□□□□ -1.98
TNPO1-201ENST00000337273 KRTAP9-8Q9BYQ0 159 aa2.68□□□□□ -1.98
TNPO1-201ENST00000337273 RYR3Q15413 4870 aa2.67□□□□□ -1.98
TNPO1-201ENST00000337273 FAT3Q8TDW7 4589 aa2.66□□□□□ -1.98
TNPO1-201ENST00000337273 MT1LQ93083 61 aa2.66□□□□□ -1.98
TNPO1-201ENST00000337273 LRP1Q07954 4544 aaKnown RBP2.66□□□□□ -1.98
TNPO1-201ENST00000337273 SPRR2DP22532 72 aa2.65□□□□□ -1.99
TNPO1-201ENST00000337273 PRM1P04553 51 aa2.62□□□□□ -1.99
TNPO1-201ENST00000337273 RYR1P21817 5038 aa2.61□□□□□ -1.99
TNPO1-201ENST00000337273 KRTAP9-3Q9BYQ3 159 aa2.6□□□□□ -1.99
TNPO1-201ENST00000337273 KRTAP19-3Q7Z4W3 81 aa2.59□□□□□ -1.99
TNPO1-201ENST00000337273 MT1EP04732 61 aa2.57□□□□□ -2
TNPO1-201ENST00000337273 TNXBP22105 4242 aa2.56□□□□□ -2
TNPO1-201ENST00000337273 PCLOQ9Y6V0 5065 aa2.55□□□□□ -2
TNPO1-201ENST00000337273 LCE2CQ5TA81 110 aa2.55□□□□□ -2
TNPO1-201ENST00000337273 HERC1Q15751 4861 aa2.52□□□□□ -2.01
TNPO1-201ENST00000337273 MT3P25713 68 aa2.52□□□□□ -2.01
TNPO1-201ENST00000337273 MUC17Q685J3 4493 aa2.5□□□□□ -2.01
TNPO1-201ENST00000337273 MT4P47944 62 aa2.5□□□□□ -2.01
TNPO1-201ENST00000337273 LPAP08519 4548 aa2.49□□□□□ -2.01
TNPO1-201ENST00000337273 LCE1BQ5T7P3 118 aa2.46□□□□□ -2.01
TNPO1-201ENST00000337273 LRP2P98164 4655 aa2.45□□□□□ -2.02
TNPO1-201ENST00000337273 KMT2CQ8NEZ4 4911 aaKnown RBP2.44□□□□□ -2.02
TNPO1-201ENST00000337273 HYDINQ4G0P3 5121 aa2.44□□□□□ -2.02
TNPO1-201ENST00000337273 RYR2Q92736 4967 aa2.43□□□□□ -2.02
TNPO1-201ENST00000337273 KRTAP9-7A8MTY7 169 aa2.43□□□□□ -2.02
TNPO1-201ENST00000337273 MT1MQ8N339 61 aa2.43□□□□□ -2.02
TNPO1-201ENST00000337273 BIRC6Q9NR09 4857 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms