RNA–Protein interactions for RNA: ENST00000336926.10

HIP1-201, Transcript of huntingtin interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIP1, Length 8,013 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIP1-201ENST00000336926 KRTAP3-2Q9BYR7 98 aa3.99□□□□□ -1.77
HIP1-201ENST00000336926 KRTAP10-4P60372 401 aaPredicted RBP3.97□□□□□ -1.77
HIP1-201ENST00000336926 DNAH9Q9NYC9 4486 aa3.91□□□□□ -1.78
HIP1-201ENST00000336926 DNAH7Q8WXX0 4024 aa3.91□□□□□ -1.78
HIP1-201ENST00000336926 CMYA5Q8N3K9 4069 aa3.89□□□□□ -1.79
HIP1-201ENST00000336926 KRTAP12-3P60328 96 aa3.89□□□□□ -1.79
HIP1-201ENST00000336926 KMT2AQ03164 3969 aa3.88□□□□□ -1.79
HIP1-201ENST00000336926 DNAH2Q9P225 4427 aa3.86□□□□□ -1.79
HIP1-201ENST00000336926 PRKDCP78527 4128 aaKnown RBP3.83□□□□□ -1.8
HIP1-201ENST00000336926 ANK2Q01484 3957 aa3.83□□□□□ -1.8
HIP1-201ENST00000336926 LYSTQ99698 3801 aa3.82□□□□□ -1.8
HIP1-201ENST00000336926 VPS13BQ7Z7G8 4022 aa3.81□□□□□ -1.8
HIP1-201ENST00000336926 DNAH6Q9C0G6 4158 aa3.8□□□□□ -1.8
HIP1-201ENST00000336926 LCE3AQ5TA76 89 aa3.78□□□□□ -1.8
HIP1-201ENST00000336926 HECTD4Q9Y4D8 3996 aa3.77□□□□□ -1.81
HIP1-201ENST00000336926 FRAS1Q86XX4 4008 aa3.77□□□□□ -1.81
HIP1-201ENST00000336926 CRCT1Q9UGL9 99 aa3.77□□□□□ -1.81
HIP1-201ENST00000336926 FAT2Q9NYQ8 4349 aa3.75□□□□□ -1.81
HIP1-201ENST00000336926 KRTAP8-1Q8IUC2 63 aa3.73□□□□□ -1.81
HIP1-201ENST00000336926 LORP23490 312 aaPredicted RBP3.7□□□□□ -1.82
HIP1-201ENST00000336926 DYNC2H1Q8NCM8 4307 aaKnown RBP3.68□□□□□ -1.82
HIP1-201ENST00000336926 MT1HP80294 61 aa3.64□□□□□ -1.83
HIP1-201ENST00000336926 VPS13DQ5THJ4 4388 aa3.64□□□□□ -1.83
HIP1-201ENST00000336926 DNAH10Q8IVF4 4471 aa3.62□□□□□ -1.83
HIP1-201ENST00000336926 SPRR2GQ9BYE4 73 aa3.62□□□□□ -1.83
HIP1-201ENST00000336926 DNAH11Q96DT5 4516 aa3.61□□□□□ -1.83
HIP1-201ENST00000336926 KRTAP19-4Q3LI73 84 aa3.57□□□□□ -1.84
HIP1-201ENST00000336926 PLECQ15149 4684 aaKnown RBP3.57□□□□□ -1.84
HIP1-201ENST00000336926 KRTAP10-5P60370 271 aa3.57□□□□□ -1.84
HIP1-201ENST00000336926 STARD9Q9P2P6 4700 aa3.56□□□□□ -1.84
HIP1-201ENST00000336926 KRTAP4-1Q9BYQ7 146 aa3.55□□□□□ -1.84
HIP1-201ENST00000336926 DNAH17Q9UFH2 4485 aa3.54□□□□□ -1.84
HIP1-201ENST00000336926 DNAH5Q8TE73 4624 aa3.53□□□□□ -1.84
HIP1-201ENST00000336926 MT2AP02795 61 aa3.5□□□□□ -1.85
HIP1-201ENST00000336926 DNAH8Q96JB1 4490 aa3.5□□□□□ -1.85
HIP1-201ENST00000336926 SPRR2FQ96RM1 72 aa3.49□□□□□ -1.85
HIP1-201ENST00000336926 LRP1BQ9NZR2 4599 aa3.49□□□□□ -1.85
HIP1-201ENST00000336926 KRTAP10-7P60409 375 aaPredicted RBP3.47□□□□□ -1.85
HIP1-201ENST00000336926 LCE3CQ5T5A8 94 aa3.42□□□□□ -1.86
HIP1-201ENST00000336926 MT1FP04733 61 aa3.41□□□□□ -1.86
HIP1-201ENST00000336926 KRTAP19-5Q3LI72 72 aa3.4□□□□□ -1.86
HIP1-201ENST00000336926 PKHD1P08F94 4074 aa3.4□□□□□ -1.87
HIP1-201ENST00000336926 PKHD1L1Q86WI1 4243 aa3.37□□□□□ -1.87
HIP1-201ENST00000336926 DNHD1Q96M86 4753 aa3.36□□□□□ -1.87
HIP1-201ENST00000336926 FLGP20930 4061 aaPredicted RBP3.36□□□□□ -1.87
HIP1-201ENST00000336926 SPRR2EP22531 72 aa3.35□□□□□ -1.87
HIP1-201ENST00000336926 SPRR2BP35325 72 aa3.35□□□□□ -1.87
HIP1-201ENST00000336926 SPRR2AP35326 72 aa3.35□□□□□ -1.87
HIP1-201ENST00000336926 KRTAP19-8Q3LI54 63 aa3.31□□□□□ -1.88
HIP1-201ENST00000336926 FAT1Q14517 4588 aa3.31□□□□□ -1.88
HIP1-201ENST00000336926 KRTAP17-1Q9BYP8 105 aa3.31□□□□□ -1.88
HIP1-201ENST00000336926 HSPG2P98160 4391 aa3.29□□□□□ -1.88
HIP1-201ENST00000336926 DYNC1H1Q14204 4646 aaKnown RBP3.28□□□□□ -1.88
HIP1-201ENST00000336926 SACSQ9NZJ4 4579 aa3.26□□□□□ -1.89
HIP1-201ENST00000336926 SPRR2DP22532 72 aa3.25□□□□□ -1.89
HIP1-201ENST00000336926 LCE2BO14633 110 aa3.23□□□□□ -1.89
HIP1-201ENST00000336926 KRTAP19-1Q8IUB9 90 aa3.23□□□□□ -1.89
HIP1-201ENST00000336926 FAT3Q8TDW7 4589 aa3.22□□□□□ -1.89
HIP1-201ENST00000336926 APOBP04114 4563 aaKnown RBP3.19□□□□□ -1.9
HIP1-201ENST00000336926 PKD1P98161 4303 aa3.19□□□□□ -1.9
HIP1-201ENST00000336926 MT1XP80297 61 aa3.18□□□□□ -1.9
HIP1-201ENST00000336926 LRP1Q07954 4544 aaKnown RBP3.17□□□□□ -1.9
HIP1-201ENST00000336926 TNXBP22105 4242 aa3.17□□□□□ -1.9
HIP1-201ENST00000336926 KRTAP9-8Q9BYQ0 159 aa3.16□□□□□ -1.9
HIP1-201ENST00000336926 KRTAP12-4P60329 112 aa3.15□□□□□ -1.9
HIP1-201ENST00000336926 RYR1P21817 5038 aa3.12□□□□□ -1.91
HIP1-201ENST00000336926 KRTAP9-2Q9BYQ4 174 aa3.11□□□□□ -1.91
HIP1-201ENST00000336926 MT1GP13640 62 aa3.1□□□□□ -1.91
HIP1-201ENST00000336926 LCE3BQ5TA77 95 aa3.1□□□□□ -1.91
HIP1-201ENST00000336926 MT1BP07438 61 aa3.09□□□□□ -1.91
HIP1-201ENST00000336926 MYCBP2O75592 4640 aa3.08□□□□□ -1.92
HIP1-201ENST00000336926 KRTAP9-3Q9BYQ3 159 aa3.08□□□□□ -1.92
HIP1-201ENST00000336926 SPRR5A0A1B0GTR4 108 aa3.06□□□□□ -1.92
HIP1-201ENST00000336926 LCE2CQ5TA81 110 aa3.06□□□□□ -1.92
HIP1-201ENST00000336926 LPAP08519 4548 aa3.04□□□□□ -1.92
HIP1-201ENST00000336926 RYR3Q15413 4870 aa3.02□□□□□ -1.93
HIP1-201ENST00000336926 KRTAP9-6A0A140TA67 174 aa2.99□□□□□ -1.93
HIP1-201ENST00000336926 LCE3DQ9BYE3 92 aa2.98□□□□□ -1.93
HIP1-201ENST00000336926 MT1LQ93083 61 aa2.98□□□□□ -1.93
HIP1-201ENST00000336926 LCE2DQ5TA82 110 aaPredicted RBP2.97□□□□□ -1.93
HIP1-201ENST00000336926 KRTAP19-3Q7Z4W3 81 aa2.96□□□□□ -1.94
HIP1-201ENST00000336926 KRTAP4-8A0A0G2JLE6 195 aa2.96□□□□□ -1.94
HIP1-201ENST00000336926 KRTAP4-8Q9BYQ9 185 aa2.96□□□□□ -1.94
HIP1-201ENST00000336926 LCE3EQ5T5B0 92 aa2.93□□□□□ -1.94
HIP1-201ENST00000336926 LRP2P98164 4655 aa2.92□□□□□ -1.94
HIP1-201ENST00000336926 KRTAP19-6Q3LI70 58 aa2.91□□□□□ -1.94
HIP1-201ENST00000336926 RYR2Q92736 4967 aa2.91□□□□□ -1.94
HIP1-201ENST00000336926 MT1EP04732 61 aa2.88□□□□□ -1.95
HIP1-201ENST00000336926 MT4P47944 62 aa2.85□□□□□ -1.95
HIP1-201ENST00000336926 KRTAP19-2Q3LHN2 52 aa2.85□□□□□ -1.95
HIP1-201ENST00000336926 HYDINQ4G0P3 5121 aa2.83□□□□□ -1.96
HIP1-201ENST00000336926 BIRC6Q9NR09 4857 aa2.82□□□□□ -1.96
HIP1-201ENST00000336926 KRTAP20-1Q3LI63 56 aa2.82□□□□□ -1.96
HIP1-201ENST00000336926 LCE2AQ5TA79 106 aaPredicted RBP2.82□□□□□ -1.96
HIP1-201ENST00000336926 HERC2O95714 4834 aa2.81□□□□□ -1.96
HIP1-201ENST00000336926 KRTAP9-7A8MTY7 169 aa2.81□□□□□ -1.96
HIP1-201ENST00000336926 MUC17Q685J3 4493 aa2.8□□□□□ -1.96
HIP1-201ENST00000336926 MT3P25713 68 aa2.8□□□□□ -1.96
HIP1-201ENST00000336926 MT1MQ8N339 61 aa2.79□□□□□ -1.96
HIP1-201ENST00000336926 KIAA1109Q2LD37 5005 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms