RNA–Protein interactions for RNA: ENST00000336349.5

SPTY2D1-201, Transcript of SPT2 chromatin protein domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTY2D1, Length 5,754 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTY2D1-201ENST00000336349 KRTAP4-5Q9BYR2 181 aa5.16□□□□□ -1.58
SPTY2D1-201ENST00000336349 HUWE1Q7Z6Z7 4374 aaKnown RBP5.14□□□□□ -1.59
SPTY2D1-201ENST00000336349 ANK2Q01484 3957 aa5.13□□□□□ -1.59
SPTY2D1-201ENST00000336349 KRTAP10-4P60372 401 aaPredicted RBP5.12□□□□□ -1.59
SPTY2D1-201ENST00000336349 KRTAP10-5P60370 271 aa5.1□□□□□ -1.59
SPTY2D1-201ENST00000336349 DNAH9Q9NYC9 4486 aa5.06□□□□□ -1.6
SPTY2D1-201ENST00000336349 DNAH3Q8TD57 4116 aa5.03□□□□□ -1.6
SPTY2D1-201ENST00000336349 KRTAP23-1A1A580 65 aa5.01□□□□□ -1.61
SPTY2D1-201ENST00000336349 FAT1Q14517 4588 aa4.97□□□□□ -1.61
SPTY2D1-201ENST00000336349 PRKDCP78527 4128 aaKnown RBP4.97□□□□□ -1.61
SPTY2D1-201ENST00000336349 CMYA5Q8N3K9 4069 aa4.96□□□□□ -1.61
SPTY2D1-201ENST00000336349 DNAH5Q8TE73 4624 aa4.94□□□□□ -1.62
SPTY2D1-201ENST00000336349 PLECQ15149 4684 aaKnown RBP4.91□□□□□ -1.62
SPTY2D1-201ENST00000336349 DNAH8Q96JB1 4490 aa4.9□□□□□ -1.63
SPTY2D1-201ENST00000336349 DNAH11Q96DT5 4516 aa4.89□□□□□ -1.63
SPTY2D1-201ENST00000336349 STARD9Q9P2P6 4700 aa4.87□□□□□ -1.63
SPTY2D1-201ENST00000336349 DNAH10Q8IVF4 4471 aa4.85□□□□□ -1.63
SPTY2D1-201ENST00000336349 KRTAP4-1Q9BYQ7 146 aa4.84□□□□□ -1.63
SPTY2D1-201ENST00000336349 VPS13DQ5THJ4 4388 aa4.84□□□□□ -1.63
SPTY2D1-201ENST00000336349 DNAH1Q9P2D7 4330 aa4.82□□□□□ -1.64
SPTY2D1-201ENST00000336349 KRTAP8-1Q8IUC2 63 aa4.8□□□□□ -1.64
SPTY2D1-201ENST00000336349 DNAH2Q9P225 4427 aa4.8□□□□□ -1.64
SPTY2D1-201ENST00000336349 DYNC2H1Q8NCM8 4307 aaKnown RBP4.77□□□□□ -1.65
SPTY2D1-201ENST00000336349 DNAH7Q8WXX0 4024 aa4.72□□□□□ -1.65
SPTY2D1-201ENST00000336349 ALMS1Q8TCU4 4167 aa4.7□□□□□ -1.66
SPTY2D1-201ENST00000336349 DNAH17Q9UFH2 4485 aa4.68□□□□□ -1.66
SPTY2D1-201ENST00000336349 KRTAP19-5Q3LI72 72 aa4.66□□□□□ -1.66
SPTY2D1-201ENST00000336349 KMT2AQ03164 3969 aa4.66□□□□□ -1.66
SPTY2D1-201ENST00000336349 LYSTQ99698 3801 aa4.64□□□□□ -1.67
SPTY2D1-201ENST00000336349 MYCBP2O75592 4640 aa4.64□□□□□ -1.67
SPTY2D1-201ENST00000336349 RYR2Q92736 4967 aa4.64□□□□□ -1.67
SPTY2D1-201ENST00000336349 RYR1P21817 5038 aa4.63□□□□□ -1.67
SPTY2D1-201ENST00000336349 MT2AP02795 61 aa4.63□□□□□ -1.67
SPTY2D1-201ENST00000336349 MT1HP80294 61 aa4.63□□□□□ -1.67
SPTY2D1-201ENST00000336349 APOBP04114 4563 aaKnown RBP4.62□□□□□ -1.67
SPTY2D1-201ENST00000336349 SACSQ9NZJ4 4579 aa4.62□□□□□ -1.67
SPTY2D1-201ENST00000336349 HYDINQ4G0P3 5121 aa4.62□□□□□ -1.67
SPTY2D1-201ENST00000336349 KMT2CQ8NEZ4 4911 aaKnown RBP4.61□□□□□ -1.67
SPTY2D1-201ENST00000336349 DYNC1H1Q14204 4646 aaKnown RBP4.6□□□□□ -1.67
SPTY2D1-201ENST00000336349 SPRR2GQ9BYE4 73 aa4.59□□□□□ -1.67
SPTY2D1-201ENST00000336349 LCE3CQ5T5A8 94 aa4.59□□□□□ -1.68
SPTY2D1-201ENST00000336349 LRP1BQ9NZR2 4599 aa4.58□□□□□ -1.68
SPTY2D1-201ENST00000336349 KIAA1109Q2LD37 5005 aa4.58□□□□□ -1.68
SPTY2D1-201ENST00000336349 MT1FP04733 61 aa4.58□□□□□ -1.68
SPTY2D1-201ENST00000336349 DNAH6Q9C0G6 4158 aa4.57□□□□□ -1.68
SPTY2D1-201ENST00000336349 VPS13BQ7Z7G8 4022 aa4.51□□□□□ -1.69
SPTY2D1-201ENST00000336349 HECTD4Q9Y4D8 3996 aa4.5□□□□□ -1.69
SPTY2D1-201ENST00000336349 FAT2Q9NYQ8 4349 aa4.49□□□□□ -1.69
SPTY2D1-201ENST00000336349 RYR3Q15413 4870 aa4.49□□□□□ -1.69
SPTY2D1-201ENST00000336349 SPRR2FQ96RM1 72 aa4.47□□□□□ -1.69
SPTY2D1-201ENST00000336349 KRTAP10-7P60409 375 aaPredicted RBP4.46□□□□□ -1.7
SPTY2D1-201ENST00000336349 PKD1P98161 4303 aa4.45□□□□□ -1.7
SPTY2D1-201ENST00000336349 PKHD1P08F94 4074 aa4.43□□□□□ -1.7
SPTY2D1-201ENST00000336349 FAT3Q8TDW7 4589 aa4.43□□□□□ -1.7
SPTY2D1-201ENST00000336349 FRAS1Q86XX4 4008 aa4.41□□□□□ -1.7
SPTY2D1-201ENST00000336349 LCE3BQ5TA77 95 aa4.4□□□□□ -1.71
SPTY2D1-201ENST00000336349 KRTAP12-4P60329 112 aa4.38□□□□□ -1.71
SPTY2D1-201ENST00000336349 EPPK1P58107 5090 aaKnown RBP4.35□□□□□ -1.71
SPTY2D1-201ENST00000336349 KRTAP19-1Q8IUB9 90 aa4.34□□□□□ -1.71
SPTY2D1-201ENST00000336349 KRTAP17-1Q9BYP8 105 aa4.33□□□□□ -1.72
SPTY2D1-201ENST00000336349 BIRC6Q9NR09 4857 aa4.33□□□□□ -1.72
SPTY2D1-201ENST00000336349 LRP1Q07954 4544 aaKnown RBP4.32□□□□□ -1.72
SPTY2D1-201ENST00000336349 MT1GP13640 62 aa4.3□□□□□ -1.72
SPTY2D1-201ENST00000336349 HSPG2P98160 4391 aa4.27□□□□□ -1.73
SPTY2D1-201ENST00000336349 HERC2O95714 4834 aa4.27□□□□□ -1.73
SPTY2D1-201ENST00000336349 KRTAP4-8A0A0G2JLE6 195 aa4.25□□□□□ -1.73
SPTY2D1-201ENST00000336349 MT1XP80297 61 aa4.25□□□□□ -1.73
SPTY2D1-201ENST00000336349 KRTAP4-8Q9BYQ9 185 aa4.25□□□□□ -1.73
SPTY2D1-201ENST00000336349 SPRR5A0A1B0GTR4 108 aa4.22□□□□□ -1.73
SPTY2D1-201ENST00000336349 ABCA13Q86UQ4 5058 aa4.2□□□□□ -1.74
SPTY2D1-201ENST00000336349 LRP2P98164 4655 aa4.2□□□□□ -1.74
SPTY2D1-201ENST00000336349 KRTAP19-8Q3LI54 63 aa4.19□□□□□ -1.74
SPTY2D1-201ENST00000336349 PCLOQ9Y6V0 5065 aa4.16□□□□□ -1.74
SPTY2D1-201ENST00000336349 MT1BP07438 61 aa4.15□□□□□ -1.74
SPTY2D1-201ENST00000336349 KRTAP4-7Q9BYR0 210 aa4.14□□□□□ -1.75
SPTY2D1-201ENST00000336349 SYNE1Q8NF91 8797 aaKnown RBP4.14□□□□□ -1.75
SPTY2D1-201ENST00000336349 LCE3DQ9BYE3 92 aa4.08□□□□□ -1.76
SPTY2D1-201ENST00000336349 SPRR2EP22531 72 aa4.08□□□□□ -1.76
SPTY2D1-201ENST00000336349 SPRR2BP35325 72 aa4.08□□□□□ -1.76
SPTY2D1-201ENST00000336349 SPRR2AP35326 72 aa4.08□□□□□ -1.76
SPTY2D1-201ENST00000336349 KRTAP19-4Q3LI73 84 aa4.07□□□□□ -1.76
SPTY2D1-201ENST00000336349 PKHD1L1Q86WI1 4243 aa4.05□□□□□ -1.76
SPTY2D1-201ENST00000336349 KRTAP9-8Q9BYQ0 159 aa4.04□□□□□ -1.76
SPTY2D1-201ENST00000336349 TNXBP22105 4242 aa4.03□□□□□ -1.76
SPTY2D1-201ENST00000336349 LPAP08519 4548 aa4.03□□□□□ -1.76
SPTY2D1-201ENST00000336349 LCE3EQ5T5B0 92 aa4.01□□□□□ -1.77
SPTY2D1-201ENST00000336349 HERC1Q15751 4861 aa3.99□□□□□ -1.77
SPTY2D1-201ENST00000336349 LCE2CQ5TA81 110 aa3.92□□□□□ -1.78
SPTY2D1-201ENST00000336349 KRTAP9-3Q9BYQ3 159 aa3.92□□□□□ -1.78
SPTY2D1-201ENST00000336349 LCE2BO14633 110 aa3.92□□□□□ -1.78
SPTY2D1-201ENST00000336349 SPRR2DP22532 72 aa3.91□□□□□ -1.78
SPTY2D1-201ENST00000336349 HMCN2Q8NDA2 5059 aa3.91□□□□□ -1.78
SPTY2D1-201ENST00000336349 UBR4Q5T4S7 5183 aa3.9□□□□□ -1.79
SPTY2D1-201ENST00000336349 PRM1P04553 51 aa3.88□□□□□ -1.79
SPTY2D1-201ENST00000336349 LOC100996750A0A140TA64 210 aa3.87□□□□□ -1.79
SPTY2D1-201ENST00000336349 MT1LQ93083 61 aa3.87□□□□□ -1.79
SPTY2D1-201ENST00000336349 RNF213Q63HN8 5207 aa3.86□□□□□ -1.79
SPTY2D1-201ENST00000336349 FSIP2Q5CZC0 6907 aa3.83□□□□□ -1.8
SPTY2D1-201ENST00000336349 KRTAP19-3Q7Z4W3 81 aa3.82□□□□□ -1.8
SPTY2D1-201ENST00000336349 KRTAP4-3Q9BYR4 195 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms