RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 MGAM2Q2M2H8 2515 aa3.88□□□□□ -1.79
TDP1-201ENST00000335725 DNAH6Q9C0G6 4158 aa3.86□□□□□ -1.79
TDP1-201ENST00000335725 KMT2AQ03164 3969 aa3.86□□□□□ -1.79
TDP1-201ENST00000335725 STAB1Q9NY15 2570 aa3.86□□□□□ -1.79
TDP1-201ENST00000335725 MYCBP2O75592 4640 aa3.85□□□□□ -1.79
TDP1-201ENST00000335725 HUWE1Q7Z6Z7 4374 aaKnown RBP3.84□□□□□ -1.79
TDP1-201ENST00000335725 KRTAP10-2P60368 255 aa3.83□□□□□ -1.8
TDP1-201ENST00000335725 TNP1P09430 55 aa3.83□□□□□ -1.8
TDP1-201ENST00000335725 DNAH2Q9P225 4427 aa3.82□□□□□ -1.8
TDP1-201ENST00000335725 DNAH7Q8WXX0 4024 aa3.82□□□□□ -1.8
TDP1-201ENST00000335725 HECTD4Q9Y4D8 3996 aa3.82□□□□□ -1.8
TDP1-201ENST00000335725 PRKDCP78527 4128 aaKnown RBP3.81□□□□□ -1.8
TDP1-201ENST00000335725 LCE2DQ5TA82 110 aaPredicted RBP3.79□□□□□ -1.8
TDP1-201ENST00000335725 DNHD1Q96M86 4753 aa3.78□□□□□ -1.8
TDP1-201ENST00000335725 KRTAP10-1P60331 282 aa3.76□□□□□ -1.81
TDP1-201ENST00000335725 APOBP04114 4563 aaKnown RBP3.74□□□□□ -1.81
TDP1-201ENST00000335725 A0A1B0GVY2 172 aa3.7□□□□□ -1.82
TDP1-201ENST00000335725 PLECQ15149 4684 aaKnown RBP3.69□□□□□ -1.82
TDP1-201ENST00000335725 LRP1BQ9NZR2 4599 aa3.66□□□□□ -1.82
TDP1-201ENST00000335725 SACSQ9NZJ4 4579 aa3.65□□□□□ -1.83
TDP1-201ENST00000335725 LORP23490 312 aaPredicted RBP3.58□□□□□ -1.84
TDP1-201ENST00000335725 LRP1Q07954 4544 aaKnown RBP3.58□□□□□ -1.84
TDP1-201ENST00000335725 DNAH5Q8TE73 4624 aa3.58□□□□□ -1.84
TDP1-201ENST00000335725 VPS13BQ7Z7G8 4022 aa3.58□□□□□ -1.84
TDP1-201ENST00000335725 STARD9Q9P2P6 4700 aa3.55□□□□□ -1.84
TDP1-201ENST00000335725 KRTAP10-10P60014 251 aa3.55□□□□□ -1.84
TDP1-201ENST00000335725 PKHD1L1Q86WI1 4243 aa3.54□□□□□ -1.84
TDP1-201ENST00000335725 PKD1P98161 4303 aa3.51□□□□□ -1.85
TDP1-201ENST00000335725 FAT2Q9NYQ8 4349 aa3.5□□□□□ -1.85
TDP1-201ENST00000335725 SMR3BP02814 79 aaPredicted RBP3.49□□□□□ -1.85
TDP1-201ENST00000335725 PKHD1P08F94 4074 aa3.48□□□□□ -1.85
TDP1-201ENST00000335725 RYR3Q15413 4870 aa3.46□□□□□ -1.86
TDP1-201ENST00000335725 DYNC1H1Q14204 4646 aaKnown RBP3.43□□□□□ -1.86
TDP1-201ENST00000335725 RYR2Q92736 4967 aa3.42□□□□□ -1.86
TDP1-201ENST00000335725 FAT3Q8TDW7 4589 aa3.41□□□□□ -1.86
TDP1-201ENST00000335725 LCE3AQ5TA76 89 aa3.41□□□□□ -1.86
TDP1-201ENST00000335725 KRTAP10-4P60372 401 aaPredicted RBP3.41□□□□□ -1.86
TDP1-201ENST00000335725 TNXBP22105 4242 aa3.4□□□□□ -1.86
TDP1-201ENST00000335725 HSPG2P98160 4391 aa3.38□□□□□ -1.87
TDP1-201ENST00000335725 LCE2BO14633 110 aa3.38□□□□□ -1.87
TDP1-201ENST00000335725 KRTAP8-1Q8IUC2 63 aa3.38□□□□□ -1.87
TDP1-201ENST00000335725 KMT2CQ8NEZ4 4911 aaKnown RBP3.37□□□□□ -1.87
TDP1-201ENST00000335725 LCE2CQ5TA81 110 aa3.35□□□□□ -1.87
TDP1-201ENST00000335725 KRTAP10-12P60413 245 aa3.33□□□□□ -1.88
TDP1-201ENST00000335725 HYDINQ4G0P3 5121 aa3.28□□□□□ -1.88
TDP1-201ENST00000335725 FAT1Q14517 4588 aa3.28□□□□□ -1.88
TDP1-201ENST00000335725 LCE2AQ5TA79 106 aaPredicted RBP3.28□□□□□ -1.88
TDP1-201ENST00000335725 BIRC6Q9NR09 4857 aa3.28□□□□□ -1.88
TDP1-201ENST00000335725 KRTAP12-3P60328 96 aa3.27□□□□□ -1.89
TDP1-201ENST00000335725 HERC2O95714 4834 aa3.26□□□□□ -1.89
TDP1-201ENST00000335725 FLGP20930 4061 aaPredicted RBP3.25□□□□□ -1.89
TDP1-201ENST00000335725 EPPK1P58107 5090 aaKnown RBP3.23□□□□□ -1.89
TDP1-201ENST00000335725 KRTAP10-5P60370 271 aa3.18□□□□□ -1.9
TDP1-201ENST00000335725 KRTAP2-3P0C7H8 128 aa3.18□□□□□ -1.9
TDP1-201ENST00000335725 KRTAP2-4Q9BYR9 128 aa3.18□□□□□ -1.9
TDP1-201ENST00000335725 KRTAP2-1Q9BYU5 128 aa3.18□□□□□ -1.9
TDP1-201ENST00000335725 M0R2T5 61 aa3.17□□□□□ -1.9
TDP1-201ENST00000335725 LPAP08519 4548 aa3.14□□□□□ -1.91
TDP1-201ENST00000335725 RYR1P21817 5038 aa3.11□□□□□ -1.91
TDP1-201ENST00000335725 LCE3CQ5T5A8 94 aa3.11□□□□□ -1.91
TDP1-201ENST00000335725 MT1HL1P0DM35 61 aa3.09□□□□□ -1.92
TDP1-201ENST00000335725 SPRR2GQ9BYE4 73 aa3.09□□□□□ -1.92
TDP1-201ENST00000335725 ABCA13Q86UQ4 5058 aa3.07□□□□□ -1.92
TDP1-201ENST00000335725 LRP2P98164 4655 aa3.07□□□□□ -1.92
TDP1-201ENST00000335725 KRTAP2-2Q9BYT5 123 aa3.06□□□□□ -1.92
TDP1-201ENST00000335725 PCLOQ9Y6V0 5065 aa3.05□□□□□ -1.92
TDP1-201ENST00000335725 KRTAP4-5Q9BYR2 181 aa3.05□□□□□ -1.92
TDP1-201ENST00000335725 KRTAP17-1Q9BYP8 105 aa3.04□□□□□ -1.92
TDP1-201ENST00000335725 HERC1Q15751 4861 aa3.03□□□□□ -1.92
TDP1-201ENST00000335725 KRTAP19-2Q3LHN2 52 aa3.02□□□□□ -1.93
TDP1-201ENST00000335725 KRTAP10-7P60409 375 aaPredicted RBP3.01□□□□□ -1.93
TDP1-201ENST00000335725 KIAA1109Q2LD37 5005 aa3.01□□□□□ -1.93
TDP1-201ENST00000335725 MUC17Q685J3 4493 aa2.99□□□□□ -1.93
TDP1-201ENST00000335725 KRTAP12-4P60329 112 aa2.98□□□□□ -1.93
TDP1-201ENST00000335725 KRTAP4-1Q9BYQ7 146 aa2.96□□□□□ -1.93
TDP1-201ENST00000335725 KRTAP19-1Q8IUB9 90 aa2.96□□□□□ -1.94
TDP1-201ENST00000335725 KRTAP9-6A8MVA2 160 aa2.93□□□□□ -1.94
TDP1-201ENST00000335725 KRTAP19-4Q3LI73 84 aa2.91□□□□□ -1.94
TDP1-201ENST00000335725 KRTAP6-3Q3LI67 103 aa2.9□□□□□ -1.95
TDP1-201ENST00000335725 LCE1AQ5T7P2 110 aa2.88□□□□□ -1.95
TDP1-201ENST00000335725 KRTAP19-5Q3LI72 72 aa2.86□□□□□ -1.95
TDP1-201ENST00000335725 MT1XP80297 61 aa2.85□□□□□ -1.95
TDP1-201ENST00000335725 KRTAP9-6A0A140TA67 174 aa2.84□□□□□ -1.95
TDP1-201ENST00000335725 KRTAP19-8Q3LI54 63 aa2.83□□□□□ -1.96
TDP1-201ENST00000335725 HMCN2Q8NDA2 5059 aa2.83□□□□□ -1.96
TDP1-201ENST00000335725 LCE5AQ5TCM9 118 aa2.73□□□□□ -1.97
TDP1-201ENST00000335725 MT1BP07438 61 aa2.71□□□□□ -1.98
TDP1-201ENST00000335725 LCE1EQ5T753 118 aa2.71□□□□□ -1.98
TDP1-201ENST00000335725 PRM1P04553 51 aa2.7□□□□□ -1.98
TDP1-201ENST00000335725 MUC2Q02817 5179 aa2.68□□□□□ -1.98
TDP1-201ENST00000335725 MT1FP04733 61 aa2.64□□□□□ -1.99
TDP1-201ENST00000335725 MT2AP02795 61 aa2.63□□□□□ -1.99
TDP1-201ENST00000335725 KRTAP9-2Q9BYQ4 174 aa2.63□□□□□ -1.99
TDP1-201ENST00000335725 KRTAP4-7Q9BYR0 210 aa2.63□□□□□ -1.99
TDP1-201ENST00000335725 LCE1FQ5T754 118 aa2.62□□□□□ -1.99
TDP1-201ENST00000335725 LCE1DQ5T752 114 aa2.61□□□□□ -1.99
TDP1-201ENST00000335725 MT1HP80294 61 aa2.6□□□□□ -1.99
TDP1-201ENST00000335725 FAT4Q6V0I7 4981 aa2.59□□□□□ -2
TDP1-201ENST00000335725 LCE3EQ5T5B0 92 aa2.57□□□□□ -2
TDP1-201ENST00000335725 KRTAP9-7A8MTY7 169 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms