RNA–Protein interactions for RNA: ENST00000332995.11

PHACTR1-201, Transcript of phosphatase and actin regulator 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PHACTR1, Length 5,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1-201ENST00000332995 CRCT1Q9UGL9 99 aa4.27□□□□□ -1.73
PHACTR1-201ENST00000332995 COL7A1Q02388 2944 aa4.25□□□□□ -1.73
PHACTR1-201ENST00000332995 DNAH9Q9NYC9 4486 aa4.24□□□□□ -1.73
PHACTR1-201ENST00000332995 INE1O15225 51 aa4.21□□□□□ -1.73
PHACTR1-201ENST00000332995 MT1HP80294 61 aa4.21□□□□□ -1.74
PHACTR1-201ENST00000332995 LCE3AQ5TA76 89 aa4.18□□□□□ -1.74
PHACTR1-201ENST00000332995 DNAH3Q8TD57 4116 aa4.17□□□□□ -1.74
PHACTR1-201ENST00000332995 ANK2Q01484 3957 aa4.15□□□□□ -1.74
PHACTR1-201ENST00000332995 LORP23490 312 aaPredicted RBP4.15□□□□□ -1.75
PHACTR1-201ENST00000332995 DNAH11Q96DT5 4516 aa4.13□□□□□ -1.75
PHACTR1-201ENST00000332995 LCE2DQ5TA82 110 aaPredicted RBP4.12□□□□□ -1.75
PHACTR1-201ENST00000332995 MT2AP02795 61 aa4.12□□□□□ -1.75
PHACTR1-201ENST00000332995 DNAH10Q8IVF4 4471 aa4.11□□□□□ -1.75
PHACTR1-201ENST00000332995 DYNC2H1Q8NCM8 4307 aaKnown RBP4.1□□□□□ -1.75
PHACTR1-201ENST00000332995 CMYA5Q8N3K9 4069 aa4.09□□□□□ -1.75
PHACTR1-201ENST00000332995 SPRR2GQ9BYE4 73 aa4.09□□□□□ -1.75
PHACTR1-201ENST00000332995 KRTAP19-4Q3LI73 84 aa4.08□□□□□ -1.76
PHACTR1-201ENST00000332995 KRTAP4-1Q9BYQ7 146 aa4.08□□□□□ -1.76
PHACTR1-201ENST00000332995 PLECQ15149 4684 aaKnown RBP4.08□□□□□ -1.76
PHACTR1-201ENST00000332995 DNAH5Q8TE73 4624 aa4.06□□□□□ -1.76
PHACTR1-201ENST00000332995 DNHD1Q96M86 4753 aa4.04□□□□□ -1.76
PHACTR1-201ENST00000332995 VPS13DQ5THJ4 4388 aa4.03□□□□□ -1.76
PHACTR1-201ENST00000332995 DNAH2Q9P225 4427 aa4.02□□□□□ -1.77
PHACTR1-201ENST00000332995 KRTAP10-7P60409 375 aaPredicted RBP4.01□□□□□ -1.77
PHACTR1-201ENST00000332995 PRKDCP78527 4128 aaKnown RBP4□□□□□ -1.77
PHACTR1-201ENST00000332995 SPRR2FQ96RM1 72 aa4□□□□□ -1.77
PHACTR1-201ENST00000332995 STARD9Q9P2P6 4700 aa3.99□□□□□ -1.77
PHACTR1-201ENST00000332995 MT1FP04733 61 aa3.97□□□□□ -1.77
PHACTR1-201ENST00000332995 CSMD3Q7Z407 3707 aa3.95□□□□□ -1.78
PHACTR1-201ENST00000332995 DNAH7Q8WXX0 4024 aa3.94□□□□□ -1.78
PHACTR1-201ENST00000332995 DNAH17Q9UFH2 4485 aa3.94□□□□□ -1.78
PHACTR1-201ENST00000332995 KRTAP10-5P60370 271 aa3.94□□□□□ -1.78
PHACTR1-201ENST00000332995 DNAH6Q9C0G6 4158 aa3.92□□□□□ -1.78
PHACTR1-201ENST00000332995 LYSTQ99698 3801 aa3.92□□□□□ -1.78
PHACTR1-201ENST00000332995 DYNC1H1Q14204 4646 aaKnown RBP3.9□□□□□ -1.79
PHACTR1-201ENST00000332995 DNAH8Q96JB1 4490 aa3.87□□□□□ -1.79
PHACTR1-201ENST00000332995 HECTD4Q9Y4D8 3996 aa3.86□□□□□ -1.79
PHACTR1-201ENST00000332995 KMT2AQ03164 3969 aa3.84□□□□□ -1.79
PHACTR1-201ENST00000332995 KRTAP19-8Q3LI54 63 aa3.84□□□□□ -1.79
PHACTR1-201ENST00000332995 SPRR2EP22531 72 aa3.83□□□□□ -1.8
PHACTR1-201ENST00000332995 SPRR2BP35325 72 aa3.83□□□□□ -1.8
PHACTR1-201ENST00000332995 SPRR2AP35326 72 aa3.83□□□□□ -1.8
PHACTR1-201ENST00000332995 LRP1BQ9NZR2 4599 aa3.82□□□□□ -1.8
PHACTR1-201ENST00000332995 FRAS1Q86XX4 4008 aa3.81□□□□□ -1.8
PHACTR1-201ENST00000332995 KRTAP19-5Q3LI72 72 aa3.81□□□□□ -1.8
PHACTR1-201ENST00000332995 HERC1Q15751 4861 aa3.8□□□□□ -1.8
PHACTR1-201ENST00000332995 FAT2Q9NYQ8 4349 aa3.79□□□□□ -1.8
PHACTR1-201ENST00000332995 RYR1P21817 5038 aa3.79□□□□□ -1.8
PHACTR1-201ENST00000332995 LCE2CQ5TA81 110 aa3.77□□□□□ -1.81
PHACTR1-201ENST00000332995 LCE3CQ5T5A8 94 aa3.75□□□□□ -1.81
PHACTR1-201ENST00000332995 FAT1Q14517 4588 aa3.74□□□□□ -1.81
PHACTR1-201ENST00000332995 SACSQ9NZJ4 4579 aa3.74□□□□□ -1.81
PHACTR1-201ENST00000332995 SPRR2DP22532 72 aa3.73□□□□□ -1.81
PHACTR1-201ENST00000332995 LCE2BO14633 110 aa3.71□□□□□ -1.81
PHACTR1-201ENST00000332995 RYR2Q92736 4967 aa3.7□□□□□ -1.82
PHACTR1-201ENST00000332995 KRTAP19-1Q8IUB9 90 aa3.68□□□□□ -1.82
PHACTR1-201ENST00000332995 RYR3Q15413 4870 aa3.68□□□□□ -1.82
PHACTR1-201ENST00000332995 LRP1Q07954 4544 aaKnown RBP3.67□□□□□ -1.82
PHACTR1-201ENST00000332995 HYDINQ4G0P3 5121 aa3.67□□□□□ -1.82
PHACTR1-201ENST00000332995 VPS13BQ7Z7G8 4022 aa3.67□□□□□ -1.82
PHACTR1-201ENST00000332995 KRTAP12-4P60329 112 aa3.66□□□□□ -1.82
PHACTR1-201ENST00000332995 PKHD1L1Q86WI1 4243 aa3.65□□□□□ -1.83
PHACTR1-201ENST00000332995 BIRC6Q9NR09 4857 aa3.64□□□□□ -1.83
PHACTR1-201ENST00000332995 APOBP04114 4563 aaKnown RBP3.64□□□□□ -1.83
PHACTR1-201ENST00000332995 HSPG2P98160 4391 aa3.64□□□□□ -1.83
PHACTR1-201ENST00000332995 KRTAP9-8Q9BYQ0 159 aa3.63□□□□□ -1.83
PHACTR1-201ENST00000332995 MT1GP13640 62 aa3.62□□□□□ -1.83
PHACTR1-201ENST00000332995 KRTAP17-1Q9BYP8 105 aa3.62□□□□□ -1.83
PHACTR1-201ENST00000332995 PKHD1P08F94 4074 aa3.61□□□□□ -1.83
PHACTR1-201ENST00000332995 FAT3Q8TDW7 4589 aa3.61□□□□□ -1.83
PHACTR1-201ENST00000332995 MT1BP07438 61 aa3.6□□□□□ -1.83
PHACTR1-201ENST00000332995 KIAA1109Q2LD37 5005 aa3.6□□□□□ -1.83
PHACTR1-201ENST00000332995 PKD1P98161 4303 aa3.6□□□□□ -1.83
PHACTR1-201ENST00000332995 MT1XP80297 61 aa3.6□□□□□ -1.83
PHACTR1-201ENST00000332995 MYCBP2O75592 4640 aa3.59□□□□□ -1.83
PHACTR1-201ENST00000332995 KRTAP9-3Q9BYQ3 159 aa3.59□□□□□ -1.83
PHACTR1-201ENST00000332995 LCE2AQ5TA79 106 aaPredicted RBP3.56□□□□□ -1.84
PHACTR1-201ENST00000332995 HERC2O95714 4834 aa3.51□□□□□ -1.85
PHACTR1-201ENST00000332995 KMT2CQ8NEZ4 4911 aaKnown RBP3.51□□□□□ -1.85
PHACTR1-201ENST00000332995 PCLOQ9Y6V0 5065 aa3.48□□□□□ -1.85
PHACTR1-201ENST00000332995 TNXBP22105 4242 aa3.47□□□□□ -1.85
PHACTR1-201ENST00000332995 KRTAP9-2Q9BYQ4 174 aa3.46□□□□□ -1.86
PHACTR1-201ENST00000332995 KRTAP19-3Q7Z4W3 81 aa3.44□□□□□ -1.86
PHACTR1-201ENST00000332995 LCE3BQ5TA77 95 aa3.42□□□□□ -1.86
PHACTR1-201ENST00000332995 KRTAP19-6Q3LI70 58 aa3.42□□□□□ -1.86
PHACTR1-201ENST00000332995 MT3P25713 68 aa3.41□□□□□ -1.86
PHACTR1-201ENST00000332995 KRTAP9-6A0A140TA67 174 aa3.39□□□□□ -1.87
PHACTR1-201ENST00000332995 EPPK1P58107 5090 aaKnown RBP3.37□□□□□ -1.87
PHACTR1-201ENST00000332995 KRTAP4-8A0A0G2JLE6 195 aa3.37□□□□□ -1.87
PHACTR1-201ENST00000332995 KRTAP4-8Q9BYQ9 185 aa3.37□□□□□ -1.87
PHACTR1-201ENST00000332995 MT1LQ93083 61 aa3.34□□□□□ -1.87
PHACTR1-201ENST00000332995 KRTAP19-2Q3LHN2 52 aa3.33□□□□□ -1.88
PHACTR1-201ENST00000332995 MT1EP04732 61 aa3.3□□□□□ -1.88
PHACTR1-201ENST00000332995 LCE3DQ9BYE3 92 aa3.3□□□□□ -1.88
PHACTR1-201ENST00000332995 ABCA13Q86UQ4 5058 aa3.27□□□□□ -1.89
PHACTR1-201ENST00000332995 LRP2P98164 4655 aa3.27□□□□□ -1.89
PHACTR1-201ENST00000332995 LCE3EQ5T5B0 92 aa3.26□□□□□ -1.89
PHACTR1-201ENST00000332995 LPAP08519 4548 aa3.25□□□□□ -1.89
PHACTR1-201ENST00000332995 MT1MQ8N339 61 aa3.22□□□□□ -1.89
PHACTR1-201ENST00000332995 KRTAP20-1Q3LI63 56 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms