RNA–Protein interactions for RNA: ENST00000332966.8

SLIT3-201, Transcript of slit guidance ligand 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLIT3, Length 4,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-201ENST00000332966 DNAH10Q8IVF4 4471 aa7.06□□□□□ -1.28
SLIT3-201ENST00000332966 PLECQ15149 4684 aaKnown RBP7.01□□□□□ -1.29
SLIT3-201ENST00000332966 DNAH17Q9UFH2 4485 aa6.98□□□□□ -1.29
SLIT3-201ENST00000332966 LORP23490 312 aaPredicted RBP6.95□□□□□ -1.3
SLIT3-201ENST00000332966 DNAH11Q96DT5 4516 aa6.94□□□□□ -1.3
SLIT3-201ENST00000332966 VPS13DQ5THJ4 4388 aa6.92□□□□□ -1.3
SLIT3-201ENST00000332966 DNAH8Q96JB1 4490 aa6.91□□□□□ -1.3
SLIT3-201ENST00000332966 DNAH5Q8TE73 4624 aa6.88□□□□□ -1.31
SLIT3-201ENST00000332966 DNAH2Q9P225 4427 aa6.84□□□□□ -1.31
SLIT3-201ENST00000332966 DNAH3Q8TD57 4116 aa6.81□□□□□ -1.32
SLIT3-201ENST00000332966 KRTAP10-12P60413 245 aa6.75□□□□□ -1.33
SLIT3-201ENST00000332966 LCE3AQ5TA76 89 aa6.74□□□□□ -1.33
SLIT3-201ENST00000332966 KRTAP12-3P60328 96 aa6.72□□□□□ -1.33
SLIT3-201ENST00000332966 LRP1BQ9NZR2 4599 aa6.7□□□□□ -1.34
SLIT3-201ENST00000332966 STARD9Q9P2P6 4700 aa6.67□□□□□ -1.34
SLIT3-201ENST00000332966 ANK2Q01484 3957 aa6.62□□□□□ -1.35
SLIT3-201ENST00000332966 SACSQ9NZJ4 4579 aa6.61□□□□□ -1.35
SLIT3-201ENST00000332966 KRTAP4-5Q9BYR2 181 aa6.59□□□□□ -1.35
SLIT3-201ENST00000332966 DYNC2H1Q8NCM8 4307 aaKnown RBP6.59□□□□□ -1.36
SLIT3-201ENST00000332966 DYNC1H1Q14204 4646 aaKnown RBP6.57□□□□□ -1.36
SLIT3-201ENST00000332966 FAT1Q14517 4588 aa6.55□□□□□ -1.36
SLIT3-201ENST00000332966 KRTAP4-1Q9BYQ7 146 aa6.49□□□□□ -1.37
SLIT3-201ENST00000332966 VPS13BQ7Z7G8 4022 aa6.48□□□□□ -1.37
SLIT3-201ENST00000332966 FRAS1Q86XX4 4008 aa6.48□□□□□ -1.37
SLIT3-201ENST00000332966 KMT2AQ03164 3969 aa6.45□□□□□ -1.38
SLIT3-201ENST00000332966 HECTD4Q9Y4D8 3996 aa6.4□□□□□ -1.39
SLIT3-201ENST00000332966 FAT2Q9NYQ8 4349 aa6.4□□□□□ -1.39
SLIT3-201ENST00000332966 SPRR2GQ9BYE4 73 aa6.36□□□□□ -1.39
SLIT3-201ENST00000332966 APOBP04114 4563 aaKnown RBP6.36□□□□□ -1.39
SLIT3-201ENST00000332966 PRKDCP78527 4128 aaKnown RBP6.33□□□□□ -1.4
SLIT3-201ENST00000332966 LYSTQ99698 3801 aa6.32□□□□□ -1.4
SLIT3-201ENST00000332966 DNHD1Q96M86 4753 aa6.3□□□□□ -1.4
SLIT3-201ENST00000332966 CMYA5Q8N3K9 4069 aa6.3□□□□□ -1.4
SLIT3-201ENST00000332966 KRTAP8-1Q8IUC2 63 aa6.26□□□□□ -1.41
SLIT3-201ENST00000332966 MYCBP2O75592 4640 aa6.25□□□□□ -1.41
SLIT3-201ENST00000332966 DNAH6Q9C0G6 4158 aa6.25□□□□□ -1.41
SLIT3-201ENST00000332966 SPRR5A0A1B0GTR4 108 aa6.23□□□□□ -1.41
SLIT3-201ENST00000332966 DNAH7Q8WXX0 4024 aa6.23□□□□□ -1.41
SLIT3-201ENST00000332966 RYR1P21817 5038 aa6.17□□□□□ -1.42
SLIT3-201ENST00000332966 FAT3Q8TDW7 4589 aa6.15□□□□□ -1.42
SLIT3-201ENST00000332966 MT2AP02795 61 aa6.14□□□□□ -1.43
SLIT3-201ENST00000332966 MT1HP80294 61 aa6.11□□□□□ -1.43
SLIT3-201ENST00000332966 CRCT1Q9UGL9 99 aa6.11□□□□□ -1.43
SLIT3-201ENST00000332966 LRP1Q07954 4544 aaKnown RBP6.06□□□□□ -1.44
SLIT3-201ENST00000332966 MT1FP04733 61 aa6.04□□□□□ -1.44
SLIT3-201ENST00000332966 LCE3CQ5T5A8 94 aa6.02□□□□□ -1.45
SLIT3-201ENST00000332966 KRTAP19-1Q8IUB9 90 aa6.01□□□□□ -1.45
SLIT3-201ENST00000332966 KRTAP10-5P60370 271 aa5.98□□□□□ -1.45
SLIT3-201ENST00000332966 KRTAP19-5Q3LI72 72 aa5.97□□□□□ -1.45
SLIT3-201ENST00000332966 KRTAP17-1Q9BYP8 105 aa5.95□□□□□ -1.46
SLIT3-201ENST00000332966 KIAA1109Q2LD37 5005 aa5.92□□□□□ -1.46
SLIT3-201ENST00000332966 KRTAP19-8Q3LI54 63 aa5.92□□□□□ -1.46
SLIT3-201ENST00000332966 RYR2Q92736 4967 aa5.9□□□□□ -1.46
SLIT3-201ENST00000332966 RYR3Q15413 4870 aa5.88□□□□□ -1.47
SLIT3-201ENST00000332966 LRP2P98164 4655 aa5.87□□□□□ -1.47
SLIT3-201ENST00000332966 KRTAP19-4Q3LI73 84 aa5.87□□□□□ -1.47
SLIT3-201ENST00000332966 HYDINQ4G0P3 5121 aa5.85□□□□□ -1.47
SLIT3-201ENST00000332966 KRTAP10-7P60409 375 aaPredicted RBP5.82□□□□□ -1.48
SLIT3-201ENST00000332966 PKHD1L1Q86WI1 4243 aa5.8□□□□□ -1.48
SLIT3-201ENST00000332966 MT1XP80297 61 aa5.8□□□□□ -1.48
SLIT3-201ENST00000332966 PKHD1P08F94 4074 aa5.79□□□□□ -1.48
SLIT3-201ENST00000332966 PKD1P98161 4303 aa5.77□□□□□ -1.48
SLIT3-201ENST00000332966 MT1BP07438 61 aa5.7□□□□□ -1.5
SLIT3-201ENST00000332966 HSPG2P98160 4391 aa5.68□□□□□ -1.5
SLIT3-201ENST00000332966 KRTAP19-2Q3LHN2 52 aa5.65□□□□□ -1.5
SLIT3-201ENST00000332966 KMT2CQ8NEZ4 4911 aaKnown RBP5.62□□□□□ -1.51
SLIT3-201ENST00000332966 KRTAP9-8Q9BYQ0 159 aa5.61□□□□□ -1.51
SLIT3-201ENST00000332966 TNXBP22105 4242 aa5.61□□□□□ -1.51
SLIT3-201ENST00000332966 LCE2CQ5TA81 110 aa5.61□□□□□ -1.51
SLIT3-201ENST00000332966 LPAP08519 4548 aa5.52□□□□□ -1.53
SLIT3-201ENST00000332966 MUC17Q685J3 4493 aa5.51□□□□□ -1.53
SLIT3-201ENST00000332966 KRTAP12-4P60329 112 aa5.48□□□□□ -1.53
SLIT3-201ENST00000332966 FLGP20930 4061 aaPredicted RBP5.44□□□□□ -1.54
SLIT3-201ENST00000332966 KRTAP9-3Q9BYQ3 159 aa5.44□□□□□ -1.54
SLIT3-201ENST00000332966 HERC2O95714 4834 aa5.43□□□□□ -1.54
SLIT3-201ENST00000332966 KRTAP4-8A0A0G2JLE6 195 aa5.4□□□□□ -1.55
SLIT3-201ENST00000332966 KRTAP4-8Q9BYQ9 185 aa5.4□□□□□ -1.55
SLIT3-201ENST00000332966 HERC1Q15751 4861 aa5.38□□□□□ -1.55
SLIT3-201ENST00000332966 BIRC6Q9NR09 4857 aa5.33□□□□□ -1.56
SLIT3-201ENST00000332966 SPRR2FQ96RM1 72 aa5.31□□□□□ -1.56
SLIT3-201ENST00000332966 MT1GP13640 62 aa5.3□□□□□ -1.56
SLIT3-201ENST00000332966 LCE3BQ5TA77 95 aa5.27□□□□□ -1.57
SLIT3-201ENST00000332966 KRTAP4-7Q9BYR0 210 aa5.23□□□□□ -1.57
SLIT3-201ENST00000332966 MT1LQ93083 61 aa5.22□□□□□ -1.57
SLIT3-201ENST00000332966 EPPK1P58107 5090 aaKnown RBP5.18□□□□□ -1.58
SLIT3-201ENST00000332966 PCLOQ9Y6V0 5065 aa5.15□□□□□ -1.59
SLIT3-201ENST00000332966 MT1EP04732 61 aa5.14□□□□□ -1.59
SLIT3-201ENST00000332966 LCE3DQ9BYE3 92 aa5.12□□□□□ -1.59
SLIT3-201ENST00000332966 LCE2BO14633 110 aa5.12□□□□□ -1.59
SLIT3-201ENST00000332966 KRTAP2-3P0C7H8 128 aa5.09□□□□□ -1.59
SLIT3-201ENST00000332966 KRTAP2-4Q9BYR9 128 aa5.09□□□□□ -1.59
SLIT3-201ENST00000332966 KRTAP2-1Q9BYU5 128 aa5.09□□□□□ -1.59
SLIT3-201ENST00000332966 LCE3EQ5T5B0 92 aa5.09□□□□□ -1.6
SLIT3-201ENST00000332966 KRTAP19-3Q7Z4W3 81 aa5.02□□□□□ -1.61
SLIT3-201ENST00000332966 ABCA13Q86UQ4 5058 aa5.02□□□□□ -1.61
SLIT3-201ENST00000332966 HMCN2Q8NDA2 5059 aa5.01□□□□□ -1.61
SLIT3-201ENST00000332966 KRTAP19-7Q3SYF9 63 aa4.96□□□□□ -1.62
SLIT3-201ENST00000332966 RNF213Q63HN8 5207 aa4.95□□□□□ -1.62
SLIT3-201ENST00000332966 MT1MQ8N339 61 aa4.9□□□□□ -1.63
SLIT3-201ENST00000332966 UBR4Q5T4S7 5183 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms