RNA–Protein interactions for RNA: ENST00000325243.6

CBX3P1-201, Transcript of chromobox 3 pseudogene 1, humanhuman

BASIC

Gene CBX3P1, Length 554 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P1-201ENST00000325243 USP9XQ93008 2570 aaPredicted RBP0.52□□□□□ -2.33
CBX3P1-201ENST00000325243 SETXQ7Z333 2677 aaKnown RBP0.52□□□□□ -2.33
CBX3P1-201ENST00000325243 FLGP20930 4061 aaPredicted RBP0.52□□□□□ -2.33
CBX3P1-201ENST00000325243 CENPEQ02224 2701 aa0.52□□□□□ -2.33
CBX3P1-201ENST00000325243 MUC3AQ02505 3323 aa0.52□□□□□ -2.33
CBX3P1-201ENST00000325243 KMT2AQ03164 3969 aa0.52□□□□□ -2.33
CBX3P1-201ENST00000325243 LRRK2Q5S007 2527 aa0.52□□□□□ -2.33
CBX3P1-201ENST00000325243 ANKHD1Q8IWZ3 2542 aaKnown RBP0.52□□□□□ -2.33
CBX3P1-201ENST00000325243 MYO18BQ8IUG5 2567 aa0.51□□□□□ -2.33
CBX3P1-201ENST00000325243 PDZD2O15018 2839 aa0.51□□□□□ -2.33
CBX3P1-201ENST00000325243 EYSQ5T1H1 3165 aa0.51□□□□□ -2.33
CBX3P1-201ENST00000325243 HIVEP3Q5T1R4 2406 aa0.51□□□□□ -2.33
CBX3P1-201ENST00000325243 SPINK6Q6UWN8 80 aa0.51□□□□□ -2.33
CBX3P1-201ENST00000325243 HRNRQ86YZ3 2850 aaPredicted RBP0.51□□□□□ -2.33
CBX3P1-201ENST00000325243 ADGRG4Q8IZF6 3080 aa0.51□□□□□ -2.33
CBX3P1-201ENST00000325243 FBN2P35556 2912 aa0.51□□□□□ -2.33
CBX3P1-201ENST00000325243 NF1P21359 2839 aa0.51□□□□□ -2.33
CBX3P1-201ENST00000325243 CFAP46Q8IYW2 2715 aa0.51□□□□□ -2.33
CBX3P1-201ENST00000325243 EPG5Q9HCE0 2579 aa0.51□□□□□ -2.33
CBX3P1-201ENST00000325243 CHD8Q9HCK8 2581 aa0.51□□□□□ -2.33
CBX3P1-201ENST00000325243 CACNA1AO00555 2505 aa0.5□□□□□ -2.33
CBX3P1-201ENST00000325243 TLN2Q9Y4G6 2542 aa0.5□□□□□ -2.33
CBX3P1-201ENST00000325243 DNAH11Q96DT5 4516 aa0.5□□□□□ -2.33
CBX3P1-201ENST00000325243 DNAH2Q9P225 4427 aa0.5□□□□□ -2.33
CBX3P1-201ENST00000325243 DNAH1Q9P2D7 4330 aa0.5□□□□□ -2.33
CBX3P1-201ENST00000325243 PKHD1L1Q86WI1 4243 aa0.5□□□□□ -2.33
CBX3P1-201ENST00000325243 ANKRD11Q6UB99 2663 aaPredicted RBP0.5□□□□□ -2.33
CBX3P1-201ENST00000325243 ATRQ13535 2644 aa0.5□□□□□ -2.33
CBX3P1-201ENST00000325243 ACANP16112 2415 aa0.5□□□□□ -2.33
CBX3P1-201ENST00000325243 CUBNO60494 3623 aa0.5□□□□□ -2.33
CBX3P1-201ENST00000325243 CSMD2Q7Z408 3487 aa0.5□□□□□ -2.33
CBX3P1-201ENST00000325243 MYO15AQ9UKN7 3530 aa0.5□□□□□ -2.33
CBX3P1-201ENST00000325243 BDP1A6H8Y1 2624 aa0.5□□□□□ -2.33
CBX3P1-201ENST00000325243 HECTD1Q9ULT8 2610 aa0.5□□□□□ -2.33
CBX3P1-201ENST00000325243 DYNC2H1Q8NCM8 4307 aaKnown RBP0.5□□□□□ -2.33
CBX3P1-201ENST00000325243 POLQO75417 2590 aa0.5□□□□□ -2.33
CBX3P1-201ENST00000325243 COL7A1Q02388 2944 aa0.49□□□□□ -2.33
CBX3P1-201ENST00000325243 FLNCQ14315 2725 aa0.49□□□□□ -2.33
CBX3P1-201ENST00000325243 ITPR3Q14573 2671 aa0.49□□□□□ -2.33
CBX3P1-201ENST00000325243 HTN3P15516 51 aa0.49□□□□□ -2.33
CBX3P1-201ENST00000325243 LINC01556Q5JQF7 62 aa0.49□□□□□ -2.33
CBX3P1-201ENST00000325243 SVEP1Q4LDE5 3571 aa0.49□□□□□ -2.33
CBX3P1-201ENST00000325243 CDH23Q9H251 3354 aa0.49□□□□□ -2.33
CBX3P1-201ENST00000325243 NBEAL2Q6ZNJ1 2754 aa0.49□□□□□ -2.33
CBX3P1-201ENST00000325243 NBEAL1Q6ZS30 2694 aa0.49□□□□□ -2.33
CBX3P1-201ENST00000325243 USP9YO00507 2555 aaPredicted RBP0.49□□□□□ -2.33
CBX3P1-201ENST00000325243 PKD1P98161 4303 aa0.48□□□□□ -2.33
CBX3P1-201ENST00000325243 ZANQ9Y493 2812 aa0.48□□□□□ -2.33
CBX3P1-201ENST00000325243 DNAH8Q96JB1 4490 aa0.48□□□□□ -2.33
CBX3P1-201ENST00000325243 HUWE1Q7Z6Z7 4374 aaKnown RBP0.48□□□□□ -2.33
CBX3P1-201ENST00000325243 USP24Q9UPU5 2620 aa0.48□□□□□ -2.33
CBX3P1-201ENST00000325243 FAT2Q9NYQ8 4349 aa0.48□□□□□ -2.33
CBX3P1-201ENST00000325243 SPART-AS1P0CW21 52 aa0.48□□□□□ -2.33
CBX3P1-201ENST00000325243 Q5VSD8 79 aa0.48□□□□□ -2.33
CBX3P1-201ENST00000325243 U3KQA8 63 aa0.48□□□□□ -2.33
CBX3P1-201ENST00000325243 MTORP42345 2549 aa0.48□□□□□ -2.33
CBX3P1-201ENST00000325243 ZFYVE26Q68DK2 2539 aa0.48□□□□□ -2.33
CBX3P1-201ENST00000325243 PKHD1P08F94 4074 aa0.48□□□□□ -2.33
CBX3P1-201ENST00000325243 ANK3Q12955 4377 aaKnown RBP0.48□□□□□ -2.33
CBX3P1-201ENST00000325243 TEP1Q99973 2627 aaKnown RBP0.48□□□□□ -2.33
CBX3P1-201ENST00000325243 TGP01266 2768 aa0.47□□□□□ -2.33
CBX3P1-201ENST00000325243 NSD1Q96L73 2696 aaPredicted RBP0.47□□□□□ -2.33
CBX3P1-201ENST00000325243 H3BNG1 76 aa0.47□□□□□ -2.33
CBX3P1-201ENST00000325243 M0QZ58 72 aa0.47□□□□□ -2.33
CBX3P1-201ENST00000325243 DEFB124Q8NES8 71 aa0.47□□□□□ -2.33
CBX3P1-201ENST00000325243 PKD1L1Q8TDX9 2849 aa0.47□□□□□ -2.33
CBX3P1-201ENST00000325243 ACACBO00763 2458 aa0.47□□□□□ -2.33
CBX3P1-201ENST00000325243 GCN1Q92616 2671 aaKnown RBP0.47□□□□□ -2.33
CBX3P1-201ENST00000325243 MXRA5Q9NR99 2828 aa0.46□□□□□ -2.34
CBX3P1-201ENST00000325243 DNAH17Q9UFH2 4485 aa0.46□□□□□ -2.34
CBX3P1-201ENST00000325243 CEP295Q9C0D2 2601 aa0.46□□□□□ -2.34
CBX3P1-201ENST00000325243 HSPG2P98160 4391 aa0.46□□□□□ -2.34
CBX3P1-201ENST00000325243 DEFB4AO15263 64 aa0.46□□□□□ -2.34
CBX3P1-201ENST00000325243 DEFB135Q30KP9 77 aa0.46□□□□□ -2.34
CBX3P1-201ENST00000325243 SACSQ9NZJ4 4579 aa0.46□□□□□ -2.34
CBX3P1-201ENST00000325243 DNAH10Q8IVF4 4471 aa0.46□□□□□ -2.34
CBX3P1-201ENST00000325243 MUC5ACP98088 5654 aa0.46□□□□□ -2.34
CBX3P1-201ENST00000325243 DNAH9Q9NYC9 4486 aa0.46□□□□□ -2.34
CBX3P1-201ENST00000325243 STAB1Q9NY15 2570 aa0.46□□□□□ -2.34
CBX3P1-201ENST00000325243 FASNP49327 2511 aaKnown RBP0.45□□□□□ -2.34
CBX3P1-201ENST00000325243 ITPR2Q14571 2701 aa0.45□□□□□ -2.34
CBX3P1-201ENST00000325243 UNC79Q9P2D8 2635 aa0.45□□□□□ -2.34
CBX3P1-201ENST00000325243 NIPBLQ6KC79 2804 aaeCLIP0.45□□□□□ -2.34
CBX3P1-201ENST00000325243 MYO9AB2RTY4 2548 aa0.45□□□□□ -2.34
CBX3P1-201ENST00000325243 IGSF10Q6WRI0 2623 aa0.45□□□□□ -2.34
CBX3P1-201ENST00000325243 DNAH5Q8TE73 4624 aa0.45□□□□□ -2.34
CBX3P1-201ENST00000325243 TENM4Q6N022 2769 aa0.44□□□□□ -2.34
CBX3P1-201ENST00000325243 HIVEP1P15822 2718 aa0.44□□□□□ -2.34
CBX3P1-201ENST00000325243 STAB2Q8WWQ8 2551 aa0.43□□□□□ -2.34
CBX3P1-201ENST00000325243 TNP1P09430 55 aa0.43□□□□□ -2.34
CBX3P1-201ENST00000325243 KRTAP19-3Q7Z4W3 81 aa0.43□□□□□ -2.34
CBX3P1-201ENST00000325243 MGAM2Q2M2H8 2515 aa0.43□□□□□ -2.34
CBX3P1-201ENST00000325243 TNXBP22105 4242 aa0.43□□□□□ -2.34
CBX3P1-201ENST00000325243 MAST4O15021 2626 aa0.43□□□□□ -2.34
CBX3P1-201ENST00000325243 FLNAP21333 2647 aaKnown RBP0.42□□□□□ -2.34
CBX3P1-201ENST00000325243 C9orf92A6NGG3 77 aa0.42□□□□□ -2.34
CBX3P1-201ENST00000325243 RPS29P62273 56 aaKnown RBP0.42□□□□□ -2.34
CBX3P1-201ENST00000325243 MYCBP2O75592 4640 aa0.42□□□□□ -2.34
CBX3P1-201ENST00000325243 FAT3Q8TDW7 4589 aa0.41□□□□□ -2.34
CBX3P1-201ENST00000325243 FLNBO75369 2602 aaKnown RBP0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms