RNA–Protein interactions for RNA: ENST00000324932.11

NUP98-201, Transcript of nucleoporin 98, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP98, Length 6,973 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-201ENST00000324932 ZNF469Q96JG9 3925 aaPredicted RBP5.83□□□□□ -1.48
NUP98-201ENST00000324932 CUBNO60494 3623 aa5.7□□□□□ -1.5
NUP98-201ENST00000324932 SPRR2GQ9BYE4 73 aa5.64□□□□□ -1.51
NUP98-201ENST00000324932 KRTAP19-4Q3LI73 84 aa5.59□□□□□ -1.51
NUP98-201ENST00000324932 TRRAPQ9Y4A5 3859 aa5.59□□□□□ -1.51
NUP98-201ENST00000324932 HUWE1Q7Z6Z7 4374 aaKnown RBP5.57□□□□□ -1.52
NUP98-201ENST00000324932 LCE3CQ5T5A8 94 aa5.57□□□□□ -1.52
NUP98-201ENST00000324932 MT2AP02795 61 aa5.57□□□□□ -1.52
NUP98-201ENST00000324932 KRTAP4-1Q9BYQ7 146 aa5.56□□□□□ -1.52
NUP98-201ENST00000324932 MT1HP80294 61 aa5.55□□□□□ -1.52
NUP98-201ENST00000324932 KRTAP19-5Q3LI72 72 aa5.54□□□□□ -1.52
NUP98-201ENST00000324932 CMYA5Q8N3K9 4069 aa5.53□□□□□ -1.52
NUP98-201ENST00000324932 KRTAP10-7P60409 375 aaPredicted RBP5.52□□□□□ -1.53
NUP98-201ENST00000324932 DNAH3Q8TD57 4116 aa5.48□□□□□ -1.53
NUP98-201ENST00000324932 DNAH11Q96DT5 4516 aa5.46□□□□□ -1.54
NUP98-201ENST00000324932 FAT1Q14517 4588 aa5.45□□□□□ -1.54
NUP98-201ENST00000324932 DNAH5Q8TE73 4624 aa5.45□□□□□ -1.54
NUP98-201ENST00000324932 ANK2Q01484 3957 aa5.44□□□□□ -1.54
NUP98-201ENST00000324932 DNAH2Q9P225 4427 aa5.43□□□□□ -1.54
NUP98-201ENST00000324932 PLECQ15149 4684 aaKnown RBP5.43□□□□□ -1.54
NUP98-201ENST00000324932 DNAH10Q8IVF4 4471 aa5.43□□□□□ -1.54
NUP98-201ENST00000324932 ALMS1Q8TCU4 4167 aa5.42□□□□□ -1.54
NUP98-201ENST00000324932 MT1FP04733 61 aa5.41□□□□□ -1.54
NUP98-201ENST00000324932 SPRR2FQ96RM1 72 aa5.4□□□□□ -1.54
NUP98-201ENST00000324932 DNHD1Q96M86 4753 aa5.32□□□□□ -1.56
NUP98-201ENST00000324932 DNAH9Q9NYC9 4486 aa5.27□□□□□ -1.57
NUP98-201ENST00000324932 DYNC2H1Q8NCM8 4307 aaKnown RBP5.25□□□□□ -1.57
NUP98-201ENST00000324932 KRTAP12-4P60329 112 aa5.22□□□□□ -1.57
NUP98-201ENST00000324932 DNAH1Q9P2D7 4330 aa5.22□□□□□ -1.57
NUP98-201ENST00000324932 RYR1P21817 5038 aa5.2□□□□□ -1.58
NUP98-201ENST00000324932 KRTAP19-8Q3LI54 63 aa5.19□□□□□ -1.58
NUP98-201ENST00000324932 LCE3BQ5TA77 95 aa5.15□□□□□ -1.58
NUP98-201ENST00000324932 SPRR5A0A1B0GTR4 108 aa5.14□□□□□ -1.59
NUP98-201ENST00000324932 DYNC1H1Q14204 4646 aaKnown RBP5.14□□□□□ -1.59
NUP98-201ENST00000324932 KIAA1109Q2LD37 5005 aa5.13□□□□□ -1.59
NUP98-201ENST00000324932 DNAH7Q8WXX0 4024 aa5.12□□□□□ -1.59
NUP98-201ENST00000324932 DNAH17Q9UFH2 4485 aa5.12□□□□□ -1.59
NUP98-201ENST00000324932 KRTAP19-1Q8IUB9 90 aa5.12□□□□□ -1.59
NUP98-201ENST00000324932 FAT3Q8TDW7 4589 aa5.1□□□□□ -1.59
NUP98-201ENST00000324932 DNAH8Q96JB1 4490 aa5.1□□□□□ -1.59
NUP98-201ENST00000324932 PRKDCP78527 4128 aaKnown RBP5.07□□□□□ -1.6
NUP98-201ENST00000324932 VPS13DQ5THJ4 4388 aa5.07□□□□□ -1.6
NUP98-201ENST00000324932 DNAH6Q9C0G6 4158 aa5.05□□□□□ -1.6
NUP98-201ENST00000324932 STARD9Q9P2P6 4700 aa5.05□□□□□ -1.6
NUP98-201ENST00000324932 MT1XP80297 61 aa5.04□□□□□ -1.6
NUP98-201ENST00000324932 SACSQ9NZJ4 4579 aa5.04□□□□□ -1.6
NUP98-201ENST00000324932 MT1GP13640 62 aa5.03□□□□□ -1.6
NUP98-201ENST00000324932 LRP1Q07954 4544 aaKnown RBP5.02□□□□□ -1.61
NUP98-201ENST00000324932 SPRR2EP22531 72 aa5□□□□□ -1.61
NUP98-201ENST00000324932 SPRR2BP35325 72 aa5□□□□□ -1.61
NUP98-201ENST00000324932 SPRR2AP35326 72 aa5□□□□□ -1.61
NUP98-201ENST00000324932 LCE3DQ9BYE3 92 aa5□□□□□ -1.61
NUP98-201ENST00000324932 CSMD3Q7Z407 3707 aa5□□□□□ -1.61
NUP98-201ENST00000324932 LYSTQ99698 3801 aa5□□□□□ -1.61
NUP98-201ENST00000324932 LCE3EQ5T5B0 92 aa4.96□□□□□ -1.61
NUP98-201ENST00000324932 LRP1BQ9NZR2 4599 aa4.95□□□□□ -1.62
NUP98-201ENST00000324932 APOBP04114 4563 aaKnown RBP4.94□□□□□ -1.62
NUP98-201ENST00000324932 MT1BP07438 61 aa4.94□□□□□ -1.62
NUP98-201ENST00000324932 HERC1Q15751 4861 aa4.88□□□□□ -1.63
NUP98-201ENST00000324932 FRAS1Q86XX4 4008 aa4.87□□□□□ -1.63
NUP98-201ENST00000324932 KMT2AQ03164 3969 aa4.87□□□□□ -1.63
NUP98-201ENST00000324932 LCE2BO14633 110 aa4.87□□□□□ -1.63
NUP98-201ENST00000324932 HECTD4Q9Y4D8 3996 aa4.86□□□□□ -1.63
NUP98-201ENST00000324932 SPRR2DP22532 72 aa4.85□□□□□ -1.63
NUP98-201ENST00000324932 RYR3Q15413 4870 aa4.85□□□□□ -1.63
NUP98-201ENST00000324932 MYCBP2O75592 4640 aa4.82□□□□□ -1.64
NUP98-201ENST00000324932 RYR2Q92736 4967 aa4.81□□□□□ -1.64
NUP98-201ENST00000324932 KRTAP4-8A0A0G2JLE6 195 aa4.81□□□□□ -1.64
NUP98-201ENST00000324932 KRTAP4-8Q9BYQ9 185 aa4.81□□□□□ -1.64
NUP98-201ENST00000324932 FAT2Q9NYQ8 4349 aa4.81□□□□□ -1.64
NUP98-201ENST00000324932 HYDINQ4G0P3 5121 aa4.8□□□□□ -1.64
NUP98-201ENST00000324932 PKD1P98161 4303 aa4.78□□□□□ -1.64
NUP98-201ENST00000324932 KRTAP9-8Q9BYQ0 159 aa4.77□□□□□ -1.65
NUP98-201ENST00000324932 MT1LQ93083 61 aa4.71□□□□□ -1.66
NUP98-201ENST00000324932 KRTAP9-3Q9BYQ3 159 aa4.69□□□□□ -1.66
NUP98-201ENST00000324932 KRTAP19-3Q7Z4W3 81 aa4.69□□□□□ -1.66
NUP98-201ENST00000324932 HERC2O95714 4834 aa4.68□□□□□ -1.66
NUP98-201ENST00000324932 PCLOQ9Y6V0 5065 aa4.67□□□□□ -1.66
NUP98-201ENST00000324932 HSPG2P98160 4391 aa4.63□□□□□ -1.67
NUP98-201ENST00000324932 SYNE1Q8NF91 8797 aaKnown RBP4.6□□□□□ -1.67
NUP98-201ENST00000324932 EPPK1P58107 5090 aaKnown RBP4.6□□□□□ -1.67
NUP98-201ENST00000324932 PKHD1L1Q86WI1 4243 aa4.6□□□□□ -1.67
NUP98-201ENST00000324932 KRTAP4-7Q9BYR0 210 aa4.6□□□□□ -1.67
NUP98-201ENST00000324932 KRTAP17-1Q9BYP8 105 aa4.59□□□□□ -1.67
NUP98-201ENST00000324932 MT1EP04732 61 aa4.58□□□□□ -1.68
NUP98-201ENST00000324932 LCE2CQ5TA81 110 aa4.58□□□□□ -1.68
NUP98-201ENST00000324932 PRM1P04553 51 aa4.58□□□□□ -1.68
NUP98-201ENST00000324932 MT3P25713 68 aa4.56□□□□□ -1.68
NUP98-201ENST00000324932 VPS13BQ7Z7G8 4022 aa4.56□□□□□ -1.68
NUP98-201ENST00000324932 PKHD1P08F94 4074 aa4.55□□□□□ -1.68
NUP98-201ENST00000324932 BIRC6Q9NR09 4857 aa4.55□□□□□ -1.68
NUP98-201ENST00000324932 KMT2CQ8NEZ4 4911 aaKnown RBP4.54□□□□□ -1.68
NUP98-201ENST00000324932 LRP2P98164 4655 aa4.48□□□□□ -1.69
NUP98-201ENST00000324932 LCE2DQ5TA82 110 aaPredicted RBP4.47□□□□□ -1.69
NUP98-201ENST00000324932 MT1MQ8N339 61 aa4.46□□□□□ -1.7
NUP98-201ENST00000324932 ABCA13Q86UQ4 5058 aa4.46□□□□□ -1.7
NUP98-201ENST00000324932 TNXBP22105 4242 aa4.36□□□□□ -1.71
NUP98-201ENST00000324932 UBR4Q5T4S7 5183 aa4.32□□□□□ -1.72
NUP98-201ENST00000324932 LOC100996750A0A140TA64 210 aa4.31□□□□□ -1.72
NUP98-201ENST00000324932 LCE1BQ5T7P3 118 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms