RNA–Protein interactions for RNA: ENST00000324309.8

CCDC149-201, Transcript of coiled-coil domain containing 149, humanhuman

TSL 2

Gene CCDC149, Length 5,604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-201ENST00000324309 CSMD2Q7Z408 3487 aa5.76□□□□□ -1.49
CCDC149-201ENST00000324309 DYNC2H1Q8NCM8 4307 aaKnown RBP5.73□□□□□ -1.49
CCDC149-201ENST00000324309 DNAH3Q8TD57 4116 aa5.7□□□□□ -1.5
CCDC149-201ENST00000324309 KRTAP3-2Q9BYR7 98 aa5.69□□□□□ -1.5
CCDC149-201ENST00000324309 DNHD1Q96M86 4753 aa5.66□□□□□ -1.5
CCDC149-201ENST00000324309 FAT2Q9NYQ8 4349 aa5.65□□□□□ -1.5
CCDC149-201ENST00000324309 KRTAP23-1A1A580 65 aa5.65□□□□□ -1.5
CCDC149-201ENST00000324309 COL7A1Q02388 2944 aa5.63□□□□□ -1.51
CCDC149-201ENST00000324309 ZNF469Q96JG9 3925 aaPredicted RBP5.62□□□□□ -1.51
CCDC149-201ENST00000324309 KRTAP10-12P60413 245 aa5.6□□□□□ -1.51
CCDC149-201ENST00000324309 MT1HP80294 61 aa5.59□□□□□ -1.51
CCDC149-201ENST00000324309 DNAH8Q96JB1 4490 aa5.58□□□□□ -1.52
CCDC149-201ENST00000324309 LRP1BQ9NZR2 4599 aa5.56□□□□□ -1.52
CCDC149-201ENST00000324309 NDUFAF8A1L188 74 aa5.55□□□□□ -1.52
CCDC149-201ENST00000324309 SACSQ9NZJ4 4579 aa5.54□□□□□ -1.52
CCDC149-201ENST00000324309 STARD9Q9P2P6 4700 aa5.54□□□□□ -1.52
CCDC149-201ENST00000324309 KRTAP15-1Q3LI76 137 aa5.54□□□□□ -1.52
CCDC149-201ENST00000324309 VPS13CQ709C8 3753 aa5.51□□□□□ -1.53
CCDC149-201ENST00000324309 KRTAP4-1Q9BYQ7 146 aa5.51□□□□□ -1.53
CCDC149-201ENST00000324309 H3BS24 57 aa5.46□□□□□ -1.53
CCDC149-201ENST00000324309 PRKDCP78527 4128 aaKnown RBP5.46□□□□□ -1.54
CCDC149-201ENST00000324309 CMYA5Q8N3K9 4069 aa5.43□□□□□ -1.54
CCDC149-201ENST00000324309 MT2AP02795 61 aa5.43□□□□□ -1.54
CCDC149-201ENST00000324309 SPRR2GQ9BYE4 73 aa5.43□□□□□ -1.54
CCDC149-201ENST00000324309 HERC1Q15751 4861 aa5.42□□□□□ -1.54
CCDC149-201ENST00000324309 RYR2Q92736 4967 aa5.41□□□□□ -1.54
CCDC149-201ENST00000324309 BIRC6Q9NR09 4857 aa5.38□□□□□ -1.55
CCDC149-201ENST00000324309 DNAH7Q8WXX0 4024 aa5.37□□□□□ -1.55
CCDC149-201ENST00000324309 HSPG2P98160 4391 aa5.36□□□□□ -1.55
CCDC149-201ENST00000324309 RYR1P21817 5038 aa5.34□□□□□ -1.55
CCDC149-201ENST00000324309 KRTAP12-3P60328 96 aa5.34□□□□□ -1.55
CCDC149-201ENST00000324309 KRTAP8-1Q8IUC2 63 aa5.34□□□□□ -1.55
CCDC149-201ENST00000324309 SRRM2Q9UQ35 2752 aaKnown RBP5.33□□□□□ -1.56
CCDC149-201ENST00000324309 APOBP04114 4563 aaKnown RBP5.3□□□□□ -1.56
CCDC149-201ENST00000324309 RYR3Q15413 4870 aa5.3□□□□□ -1.56
CCDC149-201ENST00000324309 LORP23490 312 aaPredicted RBP5.29□□□□□ -1.56
CCDC149-201ENST00000324309 KRTAP19-4Q3LI73 84 aa5.28□□□□□ -1.56
CCDC149-201ENST00000324309 FAT1Q14517 4588 aa5.27□□□□□ -1.57
CCDC149-201ENST00000324309 MT1FP04733 61 aa5.26□□□□□ -1.57
CCDC149-201ENST00000324309 KRTAP17-1Q9BYP8 105 aa5.25□□□□□ -1.57
CCDC149-201ENST00000324309 FAT3Q8TDW7 4589 aa5.23□□□□□ -1.57
CCDC149-201ENST00000324309 LCE3AQ5TA76 89 aa5.22□□□□□ -1.57
CCDC149-201ENST00000324309 MYCBP2O75592 4640 aa5.18□□□□□ -1.58
CCDC149-201ENST00000324309 KRTAP19-8Q3LI54 63 aa5.17□□□□□ -1.58
CCDC149-201ENST00000324309 PKHD1L1Q86WI1 4243 aa5.15□□□□□ -1.58
CCDC149-201ENST00000324309 KMT2AQ03164 3969 aa5.14□□□□□ -1.59
CCDC149-201ENST00000324309 VPS13BQ7Z7G8 4022 aa5.09□□□□□ -1.59
CCDC149-201ENST00000324309 KIAA1109Q2LD37 5005 aa5.06□□□□□ -1.6
CCDC149-201ENST00000324309 FRAS1Q86XX4 4008 aa5.06□□□□□ -1.6
CCDC149-201ENST00000324309 KRTAP10-5P60370 271 aa5.01□□□□□ -1.61
CCDC149-201ENST00000324309 HECTD4Q9Y4D8 3996 aa5.01□□□□□ -1.61
CCDC149-201ENST00000324309 LCE2CQ5TA81 110 aa4.99□□□□□ -1.61
CCDC149-201ENST00000324309 KRTAP9-8Q9BYQ0 159 aa4.98□□□□□ -1.61
CCDC149-201ENST00000324309 HERC2O95714 4834 aa4.98□□□□□ -1.61
CCDC149-201ENST00000324309 KRTAP19-1Q8IUB9 90 aa4.96□□□□□ -1.62
CCDC149-201ENST00000324309 INE1O15225 51 aa4.95□□□□□ -1.62
CCDC149-201ENST00000324309 LRP1Q07954 4544 aaKnown RBP4.95□□□□□ -1.62
CCDC149-201ENST00000324309 SPRR2FQ96RM1 72 aa4.95□□□□□ -1.62
CCDC149-201ENST00000324309 CRCT1Q9UGL9 99 aa4.94□□□□□ -1.62
CCDC149-201ENST00000324309 PKHD1P08F94 4074 aa4.91□□□□□ -1.62
CCDC149-201ENST00000324309 PCLOQ9Y6V0 5065 aa4.9□□□□□ -1.62
CCDC149-201ENST00000324309 KRTAP9-3Q9BYQ3 159 aa4.9□□□□□ -1.62
CCDC149-201ENST00000324309 MUC17Q685J3 4493 aa4.9□□□□□ -1.62
CCDC149-201ENST00000324309 KRTAP10-7P60409 375 aaPredicted RBP4.89□□□□□ -1.63
CCDC149-201ENST00000324309 LYSTQ99698 3801 aa4.88□□□□□ -1.63
CCDC149-201ENST00000324309 PKD1P98161 4303 aa4.88□□□□□ -1.63
CCDC149-201ENST00000324309 CSMD3Q7Z407 3707 aa4.86□□□□□ -1.63
CCDC149-201ENST00000324309 HYDINQ4G0P3 5121 aa4.85□□□□□ -1.63
CCDC149-201ENST00000324309 MT1BP07438 61 aa4.85□□□□□ -1.63
CCDC149-201ENST00000324309 LCE2DQ5TA82 110 aaPredicted RBP4.83□□□□□ -1.64
CCDC149-201ENST00000324309 KRTAP19-5Q3LI72 72 aa4.83□□□□□ -1.64
CCDC149-201ENST00000324309 KRTAP19-2Q3LHN2 52 aa4.81□□□□□ -1.64
CCDC149-201ENST00000324309 MT1XP80297 61 aa4.79□□□□□ -1.64
CCDC149-201ENST00000324309 SPRR2EP22531 72 aa4.78□□□□□ -1.64
CCDC149-201ENST00000324309 SPRR2BP35325 72 aa4.78□□□□□ -1.64
CCDC149-201ENST00000324309 SPRR2AP35326 72 aa4.78□□□□□ -1.64
CCDC149-201ENST00000324309 LCE3CQ5T5A8 94 aa4.74□□□□□ -1.65
CCDC149-201ENST00000324309 TNXBP22105 4242 aa4.72□□□□□ -1.65
CCDC149-201ENST00000324309 LCE2AQ5TA79 106 aaPredicted RBP4.68□□□□□ -1.66
CCDC149-201ENST00000324309 KRTAP19-6Q3LI70 58 aa4.67□□□□□ -1.66
CCDC149-201ENST00000324309 SPRR2DP22532 72 aa4.66□□□□□ -1.66
CCDC149-201ENST00000324309 MT1GP13640 62 aa4.64□□□□□ -1.67
CCDC149-201ENST00000324309 LCE2BO14633 110 aa4.64□□□□□ -1.67
CCDC149-201ENST00000324309 KRTAP9-2Q9BYQ4 174 aa4.64□□□□□ -1.67
CCDC149-201ENST00000324309 KMT2CQ8NEZ4 4911 aaKnown RBP4.62□□□□□ -1.67
CCDC149-201ENST00000324309 ABCA13Q86UQ4 5058 aa4.57□□□□□ -1.68
CCDC149-201ENST00000324309 FLGP20930 4061 aaPredicted RBP4.53□□□□□ -1.68
CCDC149-201ENST00000324309 EPPK1P58107 5090 aaKnown RBP4.52□□□□□ -1.69
CCDC149-201ENST00000324309 LRP2P98164 4655 aa4.51□□□□□ -1.69
CCDC149-201ENST00000324309 KRTAP9-6A0A140TA67 174 aa4.51□□□□□ -1.69
CCDC149-201ENST00000324309 KRTAP12-4P60329 112 aa4.47□□□□□ -1.69
CCDC149-201ENST00000324309 KRTAP19-3Q7Z4W3 81 aa4.46□□□□□ -1.7
CCDC149-201ENST00000324309 LPAP08519 4548 aa4.36□□□□□ -1.71
CCDC149-201ENST00000324309 MT1EP04732 61 aa4.36□□□□□ -1.71
CCDC149-201ENST00000324309 KRTAP4-8A0A0G2JLE6 195 aa4.36□□□□□ -1.71
CCDC149-201ENST00000324309 KRTAP4-8Q9BYQ9 185 aa4.36□□□□□ -1.71
CCDC149-201ENST00000324309 MT1LQ93083 61 aa4.33□□□□□ -1.72
CCDC149-201ENST00000324309 KRTAP6-3Q3LI67 103 aa4.28□□□□□ -1.72
CCDC149-201ENST00000324309 HMCN2Q8NDA2 5059 aa4.28□□□□□ -1.72
CCDC149-201ENST00000324309 RNF213Q63HN8 5207 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms