RNA–Protein interactions for RNA: ENST00000323829.9

SH3TC2-201, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 1 (best)

Gene SH3TC2, Length 7,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-201ENST00000323829 LCE3AQ5TA76 89 aa3.88□□□□□ -1.79
SH3TC2-201ENST00000323829 CSMD3Q7Z407 3707 aa3.88□□□□□ -1.79
SH3TC2-201ENST00000323829 AKAP9Q99996 3911 aa3.85□□□□□ -1.79
SH3TC2-201ENST00000323829 ALMS1Q8TCU4 4167 aa3.78□□□□□ -1.8
SH3TC2-201ENST00000323829 ZNF469Q96JG9 3925 aaPredicted RBP3.76□□□□□ -1.81
SH3TC2-201ENST00000323829 KRTAP23-1A1A580 65 aa3.76□□□□□ -1.81
SH3TC2-201ENST00000323829 HUWE1Q7Z6Z7 4374 aaKnown RBP3.74□□□□□ -1.81
SH3TC2-201ENST00000323829 KRTAP10-4P60372 401 aaPredicted RBP3.71□□□□□ -1.82
SH3TC2-201ENST00000323829 SPRR2FQ96RM1 72 aa3.63□□□□□ -1.83
SH3TC2-201ENST00000323829 DNAH10Q8IVF4 4471 aa3.59□□□□□ -1.83
SH3TC2-201ENST00000323829 DNAH1Q9P2D7 4330 aa3.58□□□□□ -1.84
SH3TC2-201ENST00000323829 DNAH2Q9P225 4427 aa3.55□□□□□ -1.84
SH3TC2-201ENST00000323829 MT1HP80294 61 aa3.53□□□□□ -1.84
SH3TC2-201ENST00000323829 DNAH11Q96DT5 4516 aa3.53□□□□□ -1.84
SH3TC2-201ENST00000323829 DNAH9Q9NYC9 4486 aa3.52□□□□□ -1.85
SH3TC2-201ENST00000323829 PLECQ15149 4684 aaKnown RBP3.51□□□□□ -1.85
SH3TC2-201ENST00000323829 CMYA5Q8N3K9 4069 aa3.5□□□□□ -1.85
SH3TC2-201ENST00000323829 DNAH8Q96JB1 4490 aa3.5□□□□□ -1.85
SH3TC2-201ENST00000323829 LCE3BQ5TA77 95 aa3.49□□□□□ -1.85
SH3TC2-201ENST00000323829 DNAH17Q9UFH2 4485 aa3.48□□□□□ -1.85
SH3TC2-201ENST00000323829 SPRR2EP22531 72 aa3.48□□□□□ -1.85
SH3TC2-201ENST00000323829 SPRR2BP35325 72 aa3.48□□□□□ -1.85
SH3TC2-201ENST00000323829 SPRR2AP35326 72 aa3.48□□□□□ -1.85
SH3TC2-201ENST00000323829 FRAS1Q86XX4 4008 aa3.48□□□□□ -1.85
SH3TC2-201ENST00000323829 DNAH5Q8TE73 4624 aa3.46□□□□□ -1.86
SH3TC2-201ENST00000323829 VPS13DQ5THJ4 4388 aa3.45□□□□□ -1.86
SH3TC2-201ENST00000323829 ANK2Q01484 3957 aa3.43□□□□□ -1.86
SH3TC2-201ENST00000323829 DNAH3Q8TD57 4116 aa3.43□□□□□ -1.86
SH3TC2-201ENST00000323829 KRTAP4-1Q9BYQ7 146 aa3.42□□□□□ -1.86
SH3TC2-201ENST00000323829 LYSTQ99698 3801 aa3.41□□□□□ -1.86
SH3TC2-201ENST00000323829 MT2AP02795 61 aa3.4□□□□□ -1.87
SH3TC2-201ENST00000323829 KRTAP19-5Q3LI72 72 aa3.39□□□□□ -1.87
SH3TC2-201ENST00000323829 LRP1BQ9NZR2 4599 aa3.38□□□□□ -1.87
SH3TC2-201ENST00000323829 FAT1Q14517 4588 aa3.37□□□□□ -1.87
SH3TC2-201ENST00000323829 VPS13BQ7Z7G8 4022 aa3.36□□□□□ -1.87
SH3TC2-201ENST00000323829 SPRR5A0A1B0GTR4 108 aa3.36□□□□□ -1.87
SH3TC2-201ENST00000323829 SPRR2DP22532 72 aa3.36□□□□□ -1.87
SH3TC2-201ENST00000323829 KMT2AQ03164 3969 aa3.34□□□□□ -1.87
SH3TC2-201ENST00000323829 STARD9Q9P2P6 4700 aa3.33□□□□□ -1.88
SH3TC2-201ENST00000323829 LCE3CQ5T5A8 94 aa3.32□□□□□ -1.88
SH3TC2-201ENST00000323829 MT1FP04733 61 aa3.32□□□□□ -1.88
SH3TC2-201ENST00000323829 DYNC2H1Q8NCM8 4307 aaKnown RBP3.31□□□□□ -1.88
SH3TC2-201ENST00000323829 SPRR2GQ9BYE4 73 aa3.29□□□□□ -1.88
SH3TC2-201ENST00000323829 APOBP04114 4563 aaKnown RBP3.29□□□□□ -1.88
SH3TC2-201ENST00000323829 SACSQ9NZJ4 4579 aa3.28□□□□□ -1.88
SH3TC2-201ENST00000323829 HECTD4Q9Y4D8 3996 aa3.28□□□□□ -1.88
SH3TC2-201ENST00000323829 KRTAP12-4P60329 112 aa3.28□□□□□ -1.88
SH3TC2-201ENST00000323829 MYCBP2O75592 4640 aa3.27□□□□□ -1.89
SH3TC2-201ENST00000323829 LCE2BO14633 110 aa3.26□□□□□ -1.89
SH3TC2-201ENST00000323829 DYNC1H1Q14204 4646 aaKnown RBP3.25□□□□□ -1.89
SH3TC2-201ENST00000323829 LCE3EQ5T5B0 92 aa3.24□□□□□ -1.89
SH3TC2-201ENST00000323829 MT1GP13640 62 aa3.23□□□□□ -1.89
SH3TC2-201ENST00000323829 PRKDCP78527 4128 aaKnown RBP3.22□□□□□ -1.89
SH3TC2-201ENST00000323829 DNAH7Q8WXX0 4024 aa3.21□□□□□ -1.89
SH3TC2-201ENST00000323829 FAT2Q9NYQ8 4349 aa3.21□□□□□ -1.9
SH3TC2-201ENST00000323829 KRTAP17-1Q9BYP8 105 aa3.21□□□□□ -1.9
SH3TC2-201ENST00000323829 DNAH6Q9C0G6 4158 aa3.2□□□□□ -1.9
SH3TC2-201ENST00000323829 LCE2CQ5TA81 110 aa3.17□□□□□ -1.9
SH3TC2-201ENST00000323829 LCE3DQ9BYE3 92 aa3.14□□□□□ -1.91
SH3TC2-201ENST00000323829 LCE2DQ5TA82 110 aaPredicted RBP3.12□□□□□ -1.91
SH3TC2-201ENST00000323829 DNHD1Q96M86 4753 aa3.12□□□□□ -1.91
SH3TC2-201ENST00000323829 LRP1Q07954 4544 aaKnown RBP3.12□□□□□ -1.91
SH3TC2-201ENST00000323829 LCE1BQ5T7P3 118 aa3.11□□□□□ -1.91
SH3TC2-201ENST00000323829 MT4P47944 62 aa3.11□□□□□ -1.91
SH3TC2-201ENST00000323829 KRTAP19-1Q8IUB9 90 aa3.1□□□□□ -1.91
SH3TC2-201ENST00000323829 KRTAP19-4Q3LI73 84 aa3.1□□□□□ -1.91
SH3TC2-201ENST00000323829 RYR1P21817 5038 aa3.09□□□□□ -1.91
SH3TC2-201ENST00000323829 FAT3Q8TDW7 4589 aa3.06□□□□□ -1.92
SH3TC2-201ENST00000323829 KRTAP19-8Q3LI54 63 aa3.03□□□□□ -1.92
SH3TC2-201ENST00000323829 LRP2P98164 4655 aa3.03□□□□□ -1.92
SH3TC2-201ENST00000323829 KRTAP9-2Q9BYQ4 174 aa3.03□□□□□ -1.92
SH3TC2-201ENST00000323829 LCE1DQ5T752 114 aa3.02□□□□□ -1.93
SH3TC2-201ENST00000323829 KIAA1109Q2LD37 5005 aa3.01□□□□□ -1.93
SH3TC2-201ENST00000323829 PRM1P04553 51 aa2.98□□□□□ -1.93
SH3TC2-201ENST00000323829 MT1XP80297 61 aa2.98□□□□□ -1.93
SH3TC2-201ENST00000323829 PKHD1P08F94 4074 aa2.97□□□□□ -1.93
SH3TC2-201ENST00000323829 KRTAP9-6A0A140TA67 174 aa2.96□□□□□ -1.94
SH3TC2-201ENST00000323829 LCE5AQ5TCM9 118 aa2.95□□□□□ -1.94
SH3TC2-201ENST00000323829 KRTAP9-8Q9BYQ0 159 aa2.95□□□□□ -1.94
SH3TC2-201ENST00000323829 RYR2Q92736 4967 aa2.94□□□□□ -1.94
SH3TC2-201ENST00000323829 HSPG2P98160 4391 aa2.92□□□□□ -1.94
SH3TC2-201ENST00000323829 KRTAP4-8A0A0G2JLE6 195 aa2.92□□□□□ -1.94
SH3TC2-201ENST00000323829 KRTAP4-8Q9BYQ9 185 aa2.92□□□□□ -1.94
SH3TC2-201ENST00000323829 MT1BP07438 61 aa2.91□□□□□ -1.94
SH3TC2-201ENST00000323829 KRTAP9-3Q9BYQ3 159 aa2.9□□□□□ -1.94
SH3TC2-201ENST00000323829 RYR3Q15413 4870 aa2.9□□□□□ -1.95
SH3TC2-201ENST00000323829 LCE1CQ5T751 118 aa2.89□□□□□ -1.95
SH3TC2-201ENST00000323829 LCE1EQ5T753 118 aa2.89□□□□□ -1.95
SH3TC2-201ENST00000323829 LCE1FQ5T754 118 aa2.89□□□□□ -1.95
SH3TC2-201ENST00000323829 LCE1AQ5T7P2 110 aa2.89□□□□□ -1.95
SH3TC2-201ENST00000323829 PKHD1L1Q86WI1 4243 aa2.89□□□□□ -1.95
SH3TC2-201ENST00000323829 LPAP08519 4548 aa2.89□□□□□ -1.95
SH3TC2-201ENST00000323829 MT3P25713 68 aa2.86□□□□□ -1.95
SH3TC2-201ENST00000323829 PKD1P98161 4303 aa2.86□□□□□ -1.95
SH3TC2-201ENST00000323829 LCE4AQ5TA78 99 aa2.85□□□□□ -1.95
SH3TC2-201ENST00000323829 KRTAP19-2Q3LHN2 52 aa2.85□□□□□ -1.95
SH3TC2-201ENST00000323829 HYDINQ4G0P3 5121 aa2.84□□□□□ -1.95
SH3TC2-201ENST00000323829 KRTAP20-1Q3LI63 56 aa2.83□□□□□ -1.96
SH3TC2-201ENST00000323829 FLGP20930 4061 aaPredicted RBP2.83□□□□□ -1.96
SH3TC2-201ENST00000323829 KRTAP19-3Q7Z4W3 81 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms