RNA–Protein interactions for RNA: ENST00000315579.9

NCAPD2-201, Transcript of non-SMC condensin I complex subunit D2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCAPD2, Length 5,548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD2-201ENST00000315579 MT1HL1P0DM35 61 aa7.93□□□□□ -1.14
NCAPD2-201ENST00000315579 CMYA5Q8N3K9 4069 aa7.93□□□□□ -1.14
NCAPD2-201ENST00000315579 COL7A1Q02388 2944 aa7.91□□□□□ -1.14
NCAPD2-201ENST00000315579 DNAH11Q96DT5 4516 aa7.87□□□□□ -1.15
NCAPD2-201ENST00000315579 DNAH2Q9P225 4427 aa7.87□□□□□ -1.15
NCAPD2-201ENST00000315579 DNAH8Q96JB1 4490 aa7.86□□□□□ -1.15
NCAPD2-201ENST00000315579 STARD9Q9P2P6 4700 aa7.85□□□□□ -1.15
NCAPD2-201ENST00000315579 DNAH5Q8TE73 4624 aa7.82□□□□□ -1.16
NCAPD2-201ENST00000315579 ANK2Q01484 3957 aa7.81□□□□□ -1.16
NCAPD2-201ENST00000315579 KRTAP15-1Q3LI76 137 aa7.77□□□□□ -1.17
NCAPD2-201ENST00000315579 DYNC2H1Q8NCM8 4307 aaKnown RBP7.71□□□□□ -1.18
NCAPD2-201ENST00000315579 KMT2AQ03164 3969 aa7.69□□□□□ -1.18
NCAPD2-201ENST00000315579 FRAS1Q86XX4 4008 aa7.68□□□□□ -1.18
NCAPD2-201ENST00000315579 LYSTQ99698 3801 aa7.67□□□□□ -1.18
NCAPD2-201ENST00000315579 KRTAP4-5Q9BYR2 181 aa7.64□□□□□ -1.19
NCAPD2-201ENST00000315579 PRKDCP78527 4128 aaKnown RBP7.6□□□□□ -1.19
NCAPD2-201ENST00000315579 LRP1BQ9NZR2 4599 aa7.58□□□□□ -1.2
NCAPD2-201ENST00000315579 HECTD4Q9Y4D8 3996 aa7.56□□□□□ -1.2
NCAPD2-201ENST00000315579 SACSQ9NZJ4 4579 aa7.55□□□□□ -1.2
NCAPD2-201ENST00000315579 DYNC1H1Q14204 4646 aaKnown RBP7.54□□□□□ -1.2
NCAPD2-201ENST00000315579 DNAH7Q8WXX0 4024 aa7.52□□□□□ -1.2
NCAPD2-201ENST00000315579 LORP23490 312 aaPredicted RBP7.51□□□□□ -1.21
NCAPD2-201ENST00000315579 VPS13BQ7Z7G8 4022 aa7.51□□□□□ -1.21
NCAPD2-201ENST00000315579 CRCT1Q9UGL9 99 aa7.5□□□□□ -1.21
NCAPD2-201ENST00000315579 FAT2Q9NYQ8 4349 aa7.48□□□□□ -1.21
NCAPD2-201ENST00000315579 DNAH6Q9C0G6 4158 aa7.48□□□□□ -1.21
NCAPD2-201ENST00000315579 FAT1Q14517 4588 aa7.44□□□□□ -1.22
NCAPD2-201ENST00000315579 INE1O15225 51 aa7.41□□□□□ -1.22
NCAPD2-201ENST00000315579 DNHD1Q96M86 4753 aa7.41□□□□□ -1.22
NCAPD2-201ENST00000315579 KRTAP4-1Q9BYQ7 146 aa7.25□□□□□ -1.25
NCAPD2-201ENST00000315579 KRTAP10-12P60413 245 aa7.2□□□□□ -1.26
NCAPD2-201ENST00000315579 APOBP04114 4563 aaKnown RBP7.19□□□□□ -1.26
NCAPD2-201ENST00000315579 KRTAP23-1A1A580 65 aa7.16□□□□□ -1.26
NCAPD2-201ENST00000315579 LCE3AQ5TA76 89 aa7.16□□□□□ -1.26
NCAPD2-201ENST00000315579 HYDINQ4G0P3 5121 aa7.07□□□□□ -1.28
NCAPD2-201ENST00000315579 FAT3Q8TDW7 4589 aa7.06□□□□□ -1.28
NCAPD2-201ENST00000315579 KRTAP12-3P60328 96 aa7.03□□□□□ -1.28
NCAPD2-201ENST00000315579 RYR1P21817 5038 aa7.01□□□□□ -1.29
NCAPD2-201ENST00000315579 KRTAP17-1Q9BYP8 105 aa6.99□□□□□ -1.29
NCAPD2-201ENST00000315579 PKD1P98161 4303 aa6.98□□□□□ -1.29
NCAPD2-201ENST00000315579 MYCBP2O75592 4640 aa6.96□□□□□ -1.29
NCAPD2-201ENST00000315579 LRP1Q07954 4544 aaKnown RBP6.95□□□□□ -1.3
NCAPD2-201ENST00000315579 KRTAP10-5P60370 271 aa6.93□□□□□ -1.3
NCAPD2-201ENST00000315579 PKHD1P08F94 4074 aa6.9□□□□□ -1.3
NCAPD2-201ENST00000315579 PKHD1L1Q86WI1 4243 aa6.86□□□□□ -1.31
NCAPD2-201ENST00000315579 MT1HP80294 61 aa6.84□□□□□ -1.31
NCAPD2-201ENST00000315579 RYR3Q15413 4870 aa6.82□□□□□ -1.32
NCAPD2-201ENST00000315579 RYR2Q92736 4967 aa6.82□□□□□ -1.32
NCAPD2-201ENST00000315579 HSPG2P98160 4391 aa6.8□□□□□ -1.32
NCAPD2-201ENST00000315579 SPRR2GQ9BYE4 73 aa6.8□□□□□ -1.32
NCAPD2-201ENST00000315579 MT2AP02795 61 aa6.75□□□□□ -1.33
NCAPD2-201ENST00000315579 TNXBP22105 4242 aa6.72□□□□□ -1.33
NCAPD2-201ENST00000315579 KRTAP8-1Q8IUC2 63 aa6.72□□□□□ -1.33
NCAPD2-201ENST00000315579 MT1FP04733 61 aa6.69□□□□□ -1.34
NCAPD2-201ENST00000315579 KIAA1109Q2LD37 5005 aa6.69□□□□□ -1.34
NCAPD2-201ENST00000315579 LPAP08519 4548 aa6.58□□□□□ -1.36
NCAPD2-201ENST00000315579 LRP2P98164 4655 aa6.56□□□□□ -1.36
NCAPD2-201ENST00000315579 KMT2CQ8NEZ4 4911 aaKnown RBP6.5□□□□□ -1.37
NCAPD2-201ENST00000315579 KRTAP19-1Q8IUB9 90 aa6.48□□□□□ -1.37
NCAPD2-201ENST00000315579 KRTAP19-5Q3LI72 72 aa6.43□□□□□ -1.38
NCAPD2-201ENST00000315579 KRTAP10-7P60409 375 aaPredicted RBP6.35□□□□□ -1.39
NCAPD2-201ENST00000315579 KRTAP19-8Q3LI54 63 aa6.35□□□□□ -1.39
NCAPD2-201ENST00000315579 LCE3CQ5T5A8 94 aa6.33□□□□□ -1.4
NCAPD2-201ENST00000315579 MT1XP80297 61 aa6.29□□□□□ -1.4
NCAPD2-201ENST00000315579 LCE2CQ5TA81 110 aa6.28□□□□□ -1.4
NCAPD2-201ENST00000315579 HERC2O95714 4834 aa6.28□□□□□ -1.4
NCAPD2-201ENST00000315579 KRTAP19-2Q3LHN2 52 aa6.24□□□□□ -1.41
NCAPD2-201ENST00000315579 SPRR5A0A1B0GTR4 108 aa6.24□□□□□ -1.41
NCAPD2-201ENST00000315579 MT1BP07438 61 aa6.23□□□□□ -1.41
NCAPD2-201ENST00000315579 KRTAP9-8Q9BYQ0 159 aa6.23□□□□□ -1.41
NCAPD2-201ENST00000315579 SPRR2FQ96RM1 72 aa6.2□□□□□ -1.42
NCAPD2-201ENST00000315579 MUC17Q685J3 4493 aa6.17□□□□□ -1.42
NCAPD2-201ENST00000315579 HERC1Q15751 4861 aa6.14□□□□□ -1.43
NCAPD2-201ENST00000315579 FLGP20930 4061 aaPredicted RBP6.14□□□□□ -1.43
NCAPD2-201ENST00000315579 BIRC6Q9NR09 4857 aa6.1□□□□□ -1.43
NCAPD2-201ENST00000315579 EPPK1P58107 5090 aaKnown RBP6.05□□□□□ -1.44
NCAPD2-201ENST00000315579 KRTAP9-3Q9BYQ3 159 aa6.04□□□□□ -1.44
NCAPD2-201ENST00000315579 KRTAP4-8A0A0G2JLE6 195 aa5.96□□□□□ -1.46
NCAPD2-201ENST00000315579 KRTAP4-8Q9BYQ9 185 aa5.96□□□□□ -1.46
NCAPD2-201ENST00000315579 ABCA13Q86UQ4 5058 aa5.96□□□□□ -1.46
NCAPD2-201ENST00000315579 KRTAP19-4Q3LI73 84 aa5.91□□□□□ -1.46
NCAPD2-201ENST00000315579 PCLOQ9Y6V0 5065 aa5.87□□□□□ -1.47
NCAPD2-201ENST00000315579 SPRR2EP22531 72 aa5.81□□□□□ -1.48
NCAPD2-201ENST00000315579 SPRR2BP35325 72 aa5.81□□□□□ -1.48
NCAPD2-201ENST00000315579 SPRR2AP35326 72 aa5.81□□□□□ -1.48
NCAPD2-201ENST00000315579 LCE3BQ5TA77 95 aa5.78□□□□□ -1.48
NCAPD2-201ENST00000315579 LCE2BO14633 110 aa5.76□□□□□ -1.49
NCAPD2-201ENST00000315579 MT1GP13640 62 aa5.76□□□□□ -1.49
NCAPD2-201ENST00000315579 KRTAP4-7Q9BYR0 210 aa5.71□□□□□ -1.49
NCAPD2-201ENST00000315579 KRTAP12-4P60329 112 aa5.68□□□□□ -1.5
NCAPD2-201ENST00000315579 SPRR2DP22532 72 aa5.63□□□□□ -1.51
NCAPD2-201ENST00000315579 HMCN2Q8NDA2 5059 aa5.62□□□□□ -1.51
NCAPD2-201ENST00000315579 MT1LQ93083 61 aa5.6□□□□□ -1.51
NCAPD2-201ENST00000315579 FAT4Q6V0I7 4981 aa5.59□□□□□ -1.51
NCAPD2-201ENST00000315579 RNF213Q63HN8 5207 aa5.57□□□□□ -1.52
NCAPD2-201ENST00000315579 MT1EP04732 61 aa5.56□□□□□ -1.52
NCAPD2-201ENST00000315579 MUC2Q02817 5179 aa5.51□□□□□ -1.53
NCAPD2-201ENST00000315579 LCE3DQ9BYE3 92 aa5.49□□□□□ -1.53
NCAPD2-201ENST00000315579 KRTAP19-3Q7Z4W3 81 aa5.45□□□□□ -1.54
NCAPD2-201ENST00000315579 LCE3EQ5T5B0 92 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms