RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 IGKV3D-7A0A0C4DH55 119 aa4.17□□□□□ -1.74
CDC42-201ENST00000315554 A8MWP4 228 aa4.17□□□□□ -1.74
CDC42-201ENST00000315554 H7BZZ5 65 aa4.17□□□□□ -1.74
CDC42-201ENST00000315554 C20orf166-AS1Q96NR2 134 aa4.17□□□□□ -1.74
CDC42-201ENST00000315554 C8orf17Q9NRJ1 99 aa4.17□□□□□ -1.74
CDC42-201ENST00000315554 A8MUU9 505 aa4.16□□□□□ -1.74
CDC42-201ENST00000315554 NDUFC1O43677 76 aa4.16□□□□□ -1.74
CDC42-201ENST00000315554 NDUFB1O75438 58 aa4.16□□□□□ -1.74
CDC42-201ENST00000315554 KRTAP15-1Q3LI76 137 aa4.16□□□□□ -1.74
CDC42-201ENST00000315554 KRTAP5-11Q6L8G4 156 aa4.16□□□□□ -1.74
CDC42-201ENST00000315554 LINC00643Q86TS7 51 aa4.16□□□□□ -1.74
CDC42-201ENST00000315554 LINC00846Q9NV44 126 aa4.16□□□□□ -1.74
CDC42-201ENST00000315554 BPY2O14599 106 aa4.15□□□□□ -1.75
CDC42-201ENST00000315554 K7EQZ3 153 aa4.14□□□□□ -1.75
CDC42-201ENST00000315554 ADM2Q7Z4H4 148 aa4.13□□□□□ -1.75
CDC42-201ENST00000315554 Q8N9L7 120 aa4.13□□□□□ -1.75
CDC42-201ENST00000315554 KLKP1Q107X0 134 aa4.12□□□□□ -1.75
CDC42-201ENST00000315554 UBL5Q9BZL1 73 aa4.12□□□□□ -1.75
CDC42-201ENST00000315554 FAT4Q6V0I7 4981 aa4.12□□□□□ -1.75
CDC42-201ENST00000315554 MMP24-AS1A0A0U1RRL7 71 aa4.11□□□□□ -1.75
CDC42-201ENST00000315554 LUZP6Q538Z0 58 aa4.11□□□□□ -1.75
CDC42-201ENST00000315554 KRTAP10-7P60409 375 aaPredicted RBP4.1□□□□□ -1.75
CDC42-201ENST00000315554 WFDC13Q8IUB5 93 aa4.1□□□□□ -1.75
CDC42-201ENST00000315554 hDV103S1A0JD37 113 aa4.08□□□□□ -1.76
CDC42-201ENST00000315554 KRTAP19-2Q3LHN2 52 aa4.07□□□□□ -1.76
CDC42-201ENST00000315554 Q8N9P0 234 aaPredicted RBP4.07□□□□□ -1.76
CDC42-201ENST00000315554 TMEM254Q8TBM7 123 aa4.07□□□□□ -1.76
CDC42-201ENST00000315554 ZCCHC13Q8WW36 166 aaKnown RBP4.07□□□□□ -1.76
CDC42-201ENST00000315554 MRPL34Q9BQ48 92 aaKnown RBP4.07□□□□□ -1.76
CDC42-201ENST00000315554 ROMO1P60602 79 aa4.05□□□□□ -1.76
CDC42-201ENST00000315554 CASC2Q6XLA1 102 aa4.05□□□□□ -1.76
CDC42-201ENST00000315554 CYP4F30PQ9H0H9 118 aa4.05□□□□□ -1.76
CDC42-201ENST00000315554 COX6B2Q6YFQ2 88 aa4.05□□□□□ -1.76
CDC42-201ENST00000315554 A6NED7 52 aa4.03□□□□□ -1.76
CDC42-201ENST00000315554 HCG22E2RYF7 251 aa4.03□□□□□ -1.76
CDC42-201ENST00000315554 CDC42SE1Q9NRR8 79 aa4.02□□□□□ -1.77
CDC42-201ENST00000315554 HRES1P13985 223 aa4□□□□□ -1.77
CDC42-201ENST00000315554 SPINK7P58062 85 aa4□□□□□ -1.77
CDC42-201ENST00000315554 MT1HP80294 61 aa4□□□□□ -1.77
CDC42-201ENST00000315554 Q5W150 140 aa4□□□□□ -1.77
CDC42-201ENST00000315554 C1orf64Q8NEQ6 169 aa4□□□□□ -1.77
CDC42-201ENST00000315554 TRAV22A0A0B4J277 110 aa3.98□□□□□ -1.77
CDC42-201ENST00000315554 Q5VV11 94 aa3.98□□□□□ -1.77
CDC42-201ENST00000315554 TRAV7A0A075B6U4 112 aa3.98□□□□□ -1.77
CDC42-201ENST00000315554 ATP5EP2Q5VTU8 51 aa3.98□□□□□ -1.77
CDC42-201ENST00000315554 C20orf197Q8N268 126 aa3.98□□□□□ -1.77
CDC42-201ENST00000315554 IGKV2D-30A0A075B6S6 120 aa3.97□□□□□ -1.77
CDC42-201ENST00000315554 A0A087WVE0 104 aa3.97□□□□□ -1.77
CDC42-201ENST00000315554 IGKV2-30P06310 120 aa3.97□□□□□ -1.77
CDC42-201ENST00000315554 SPTSSBQ8NFR3 76 aa3.97□□□□□ -1.77
CDC42-201ENST00000315554 M0R2T5 61 aa3.95□□□□□ -1.78
CDC42-201ENST00000315554 A8MU10 97 aa3.94□□□□□ -1.78
CDC42-201ENST00000315554 KRTAP10-6P60371 365 aaPredicted RBP3.94□□□□□ -1.78
CDC42-201ENST00000315554 H3BPC8 53 aa3.91□□□□□ -1.78
CDC42-201ENST00000315554 P0C880 135 aa3.91□□□□□ -1.78
CDC42-201ENST00000315554 TP53AIP1Q9HCN2 124 aa3.91□□□□□ -1.78
CDC42-201ENST00000315554 FLGP20930 4061 aaPredicted RBP3.89□□□□□ -1.79
CDC42-201ENST00000315554 LOC101927531A0A1B0GV80 90 aa3.89□□□□□ -1.79
CDC42-201ENST00000315554 CHKB-CPT1BH3BT56 60 aa3.87□□□□□ -1.79
CDC42-201ENST00000315554 MIR22HGQ0VDD5 57 aa3.87□□□□□ -1.79
CDC42-201ENST00000315554 LCE1AQ5T7P2 110 aa3.86□□□□□ -1.79
CDC42-201ENST00000315554 SPANXA2-OT1Q8N9U9 137 aa3.86□□□□□ -1.79
CDC42-201ENST00000315554 H0Y9P7 68 aa3.86□□□□□ -1.79
CDC42-201ENST00000315554 NDUFAF8A1L188 74 aa3.85□□□□□ -1.79
CDC42-201ENST00000315554 H1FX-AS1Q4G0G2 97 aa3.84□□□□□ -1.8
CDC42-201ENST00000315554 LCE1EQ5T753 118 aa3.82□□□□□ -1.8
CDC42-201ENST00000315554 LINC00208Q96KT6 92 aa3.8□□□□□ -1.8
CDC42-201ENST00000315554 MT2AP02795 61 aa3.79□□□□□ -1.8
CDC42-201ENST00000315554 CSAG1Q6PB30 78 aa3.78□□□□□ -1.8
CDC42-201ENST00000315554 SNURFQ9Y675 71 aa3.77□□□□□ -1.81
CDC42-201ENST00000315554 MT1FP04733 61 aa3.76□□□□□ -1.81
CDC42-201ENST00000315554 S4R3F8 94 aa3.75□□□□□ -1.81
CDC42-201ENST00000315554 A0A1B0GU33 70 aa3.74□□□□□ -1.81
CDC42-201ENST00000315554 KRTAP10-10P60014 251 aa3.74□□□□□ -1.81
CDC42-201ENST00000315554 KRTAP5-1Q6L8H4 278 aa3.74□□□□□ -1.81
CDC42-201ENST00000315554 KRTAP5-9P26371 169 aa3.73□□□□□ -1.81
CDC42-201ENST00000315554 PRR15LQ9BU68 103 aa3.72□□□□□ -1.81
CDC42-201ENST00000315554 KRTAP5-4Q6L8H1 288 aa3.7□□□□□ -1.82
CDC42-201ENST00000315554 KRTAP25-1Q3LHN0 102 aa3.68□□□□□ -1.82
CDC42-201ENST00000315554 DMAC1Q96GE9 116 aa3.68□□□□□ -1.82
CDC42-201ENST00000315554 KRTAP2-2Q9BYT5 123 aa3.68□□□□□ -1.82
CDC42-201ENST00000315554 LINC01558Q9Y6Z2 57 aa3.67□□□□□ -1.82
CDC42-201ENST00000315554 FSIP2Q5CZC0 6907 aa3.64□□□□□ -1.83
CDC42-201ENST00000315554 KRTAP4-4Q9BYR3 166 aa3.63□□□□□ -1.83
CDC42-201ENST00000315554 CRCT1Q9UGL9 99 aa3.63□□□□□ -1.83
CDC42-201ENST00000315554 USH2AO75445 5202 aa3.62□□□□□ -1.83
CDC42-201ENST00000315554 SPINT4Q6UDR6 99 aa3.6□□□□□ -1.83
CDC42-201ENST00000315554 ACYP2P14621 99 aa3.57□□□□□ -1.84
CDC42-201ENST00000315554 SSPOA2VEC9 5147 aa3.57□□□□□ -1.84
CDC42-201ENST00000315554 PRO2289Q9P1D8 64 aa3.56□□□□□ -1.84
CDC42-201ENST00000315554 SPATA8Q6RVD6 105 aa3.54□□□□□ -1.84
CDC42-201ENST00000315554 H0YAA0 97 aa3.53□□□□□ -1.84
CDC42-201ENST00000315554 UQCR11O14957 56 aa3.53□□□□□ -1.84
CDC42-201ENST00000315554 SPRR2GQ9BYE4 73 aa3.51□□□□□ -1.85
CDC42-201ENST00000315554 R4GN34 69 aa3.5□□□□□ -1.85
CDC42-201ENST00000315554 COA5Q86WW8 74 aa3.48□□□□□ -1.85
CDC42-201ENST00000315554 CRIPTQ9P021 101 aa3.48□□□□□ -1.85
CDC42-201ENST00000315554 MT1BP07438 61 aa3.47□□□□□ -1.85
CDC42-201ENST00000315554 KRTAP19-8Q3LI54 63 aa3.47□□□□□ -1.85
CDC42-201ENST00000315554 KRTAP19-6Q3LI70 58 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms