RNA–Protein interactions for RNA: ENST00000314358.9

KDM3B-201, Transcript of lysine demethylase 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3B, Length 6,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-201ENST00000314358 MUC3AQ02505 3323 aa8.9□□□□□ -0.98
KDM3B-201ENST00000314358 AKAP9Q99996 3911 aa8.77□□□□□ -1.01
KDM3B-201ENST00000314358 CSMD3Q7Z407 3707 aa8.76□□□□□ -1.01
KDM3B-201ENST00000314358 KRTAP8-1Q8IUC2 63 aa8.75□□□□□ -1.01
KDM3B-201ENST00000314358 DNAH9Q9NYC9 4486 aa8.63□□□□□ -1.03
KDM3B-201ENST00000314358 KRTAP23-1A1A580 65 aa8.52□□□□□ -1.05
KDM3B-201ENST00000314358 DNAH5Q8TE73 4624 aa8.49□□□□□ -1.05
KDM3B-201ENST00000314358 DNAH1Q9P2D7 4330 aa8.43□□□□□ -1.06
KDM3B-201ENST00000314358 KRTAP4-1Q9BYQ7 146 aa8.37□□□□□ -1.07
KDM3B-201ENST00000314358 MT1HP80294 61 aa8.33□□□□□ -1.08
KDM3B-201ENST00000314358 ZNF469Q96JG9 3925 aaPredicted RBP8.32□□□□□ -1.08
KDM3B-201ENST00000314358 DNAH11Q96DT5 4516 aa8.3□□□□□ -1.08
KDM3B-201ENST00000314358 DNAH10Q8IVF4 4471 aa8.29□□□□□ -1.08
KDM3B-201ENST00000314358 PLECQ15149 4684 aaKnown RBP8.26□□□□□ -1.09
KDM3B-201ENST00000314358 DNAH2Q9P225 4427 aa8.26□□□□□ -1.09
KDM3B-201ENST00000314358 DNAH17Q9UFH2 4485 aa8.18□□□□□ -1.1
KDM3B-201ENST00000314358 VPS13DQ5THJ4 4388 aa8.16□□□□□ -1.1
KDM3B-201ENST00000314358 SPRR2FQ96RM1 72 aa8.16□□□□□ -1.1
KDM3B-201ENST00000314358 DNAH3Q8TD57 4116 aa8.13□□□□□ -1.11
KDM3B-201ENST00000314358 KRTAP19-5Q3LI72 72 aa8.12□□□□□ -1.11
KDM3B-201ENST00000314358 MT2AP02795 61 aa8.09□□□□□ -1.11
KDM3B-201ENST00000314358 DYNC1H1Q14204 4646 aaKnown RBP8.09□□□□□ -1.11
KDM3B-201ENST00000314358 KRTAP10-7P60409 375 aaPredicted RBP8.09□□□□□ -1.12
KDM3B-201ENST00000314358 DNHD1Q96M86 4753 aa8.05□□□□□ -1.12
KDM3B-201ENST00000314358 FAT2Q9NYQ8 4349 aa8.02□□□□□ -1.13
KDM3B-201ENST00000314358 LRP1BQ9NZR2 4599 aa7.99□□□□□ -1.13
KDM3B-201ENST00000314358 MT1FP04733 61 aa7.97□□□□□ -1.13
KDM3B-201ENST00000314358 SPRR2GQ9BYE4 73 aa7.96□□□□□ -1.14
KDM3B-201ENST00000314358 ANK2Q01484 3957 aa7.94□□□□□ -1.14
KDM3B-201ENST00000314358 SACSQ9NZJ4 4579 aa7.93□□□□□ -1.14
KDM3B-201ENST00000314358 LCE3CQ5T5A8 94 aa7.92□□□□□ -1.14
KDM3B-201ENST00000314358 STARD9Q9P2P6 4700 aa7.9□□□□□ -1.14
KDM3B-201ENST00000314358 DYNC2H1Q8NCM8 4307 aaKnown RBP7.9□□□□□ -1.15
KDM3B-201ENST00000314358 DNAH8Q96JB1 4490 aa7.83□□□□□ -1.16
KDM3B-201ENST00000314358 RYR1P21817 5038 aa7.82□□□□□ -1.16
KDM3B-201ENST00000314358 FAT1Q14517 4588 aa7.8□□□□□ -1.16
KDM3B-201ENST00000314358 LCE3BQ5TA77 95 aa7.78□□□□□ -1.16
KDM3B-201ENST00000314358 KMT2AQ03164 3969 aa7.78□□□□□ -1.16
KDM3B-201ENST00000314358 PRKDCP78527 4128 aaKnown RBP7.75□□□□□ -1.17
KDM3B-201ENST00000314358 FRAS1Q86XX4 4008 aa7.73□□□□□ -1.17
KDM3B-201ENST00000314358 CMYA5Q8N3K9 4069 aa7.72□□□□□ -1.17
KDM3B-201ENST00000314358 SPRR2EP22531 72 aa7.72□□□□□ -1.17
KDM3B-201ENST00000314358 SPRR2BP35325 72 aa7.72□□□□□ -1.17
KDM3B-201ENST00000314358 SPRR2AP35326 72 aa7.72□□□□□ -1.17
KDM3B-201ENST00000314358 VPS13BQ7Z7G8 4022 aa7.72□□□□□ -1.17
KDM3B-201ENST00000314358 DNAH7Q8WXX0 4024 aa7.71□□□□□ -1.18
KDM3B-201ENST00000314358 APOBP04114 4563 aaKnown RBP7.62□□□□□ -1.19
KDM3B-201ENST00000314358 RYR3Q15413 4870 aa7.6□□□□□ -1.19
KDM3B-201ENST00000314358 DNAH6Q9C0G6 4158 aa7.59□□□□□ -1.19
KDM3B-201ENST00000314358 KRTAP17-1Q9BYP8 105 aa7.57□□□□□ -1.2
KDM3B-201ENST00000314358 MT1GP13640 62 aa7.55□□□□□ -1.2
KDM3B-201ENST00000314358 KRTAP12-4P60329 112 aa7.46□□□□□ -1.22
KDM3B-201ENST00000314358 SPRR2DP22532 72 aa7.44□□□□□ -1.22
KDM3B-201ENST00000314358 LYSTQ99698 3801 aa7.43□□□□□ -1.22
KDM3B-201ENST00000314358 FAT3Q8TDW7 4589 aa7.41□□□□□ -1.22
KDM3B-201ENST00000314358 KRTAP19-8Q3LI54 63 aa7.4□□□□□ -1.22
KDM3B-201ENST00000314358 KRTAP19-1Q8IUB9 90 aa7.36□□□□□ -1.23
KDM3B-201ENST00000314358 RYR2Q92736 4967 aa7.35□□□□□ -1.23
KDM3B-201ENST00000314358 HERC1Q15751 4861 aa7.34□□□□□ -1.23
KDM3B-201ENST00000314358 KRTAP19-4Q3LI73 84 aa7.32□□□□□ -1.24
KDM3B-201ENST00000314358 KRTAP4-8A0A0G2JLE6 195 aa7.28□□□□□ -1.24
KDM3B-201ENST00000314358 KRTAP4-8Q9BYQ9 185 aa7.28□□□□□ -1.24
KDM3B-201ENST00000314358 LCE2BO14633 110 aa7.27□□□□□ -1.25
KDM3B-201ENST00000314358 MT1XP80297 61 aa7.23□□□□□ -1.25
KDM3B-201ENST00000314358 KIAA1109Q2LD37 5005 aa7.23□□□□□ -1.25
KDM3B-201ENST00000314358 HECTD4Q9Y4D8 3996 aa7.2□□□□□ -1.26
KDM3B-201ENST00000314358 KRTAP9-8Q9BYQ0 159 aa7.18□□□□□ -1.26
KDM3B-201ENST00000314358 MT1BP07438 61 aa7.17□□□□□ -1.26
KDM3B-201ENST00000314358 LRP1Q07954 4544 aaKnown RBP7.16□□□□□ -1.26
KDM3B-201ENST00000314358 HSPG2P98160 4391 aa7.12□□□□□ -1.27
KDM3B-201ENST00000314358 LCE3DQ9BYE3 92 aa7.12□□□□□ -1.27
KDM3B-201ENST00000314358 BIRC6Q9NR09 4857 aa7.11□□□□□ -1.27
KDM3B-201ENST00000314358 MYCBP2O75592 4640 aa7.08□□□□□ -1.28
KDM3B-201ENST00000314358 LCE2CQ5TA81 110 aa7.06□□□□□ -1.28
KDM3B-201ENST00000314358 KRTAP9-3Q9BYQ3 159 aa7.04□□□□□ -1.28
KDM3B-201ENST00000314358 LPAP08519 4548 aa7.04□□□□□ -1.28
KDM3B-201ENST00000314358 PKHD1L1Q86WI1 4243 aa7.02□□□□□ -1.29
KDM3B-201ENST00000314358 KRTAP4-7Q9BYR0 210 aa6.99□□□□□ -1.29
KDM3B-201ENST00000314358 HERC2O95714 4834 aa6.96□□□□□ -1.3
KDM3B-201ENST00000314358 LCE3EQ5T5B0 92 aa6.94□□□□□ -1.3
KDM3B-201ENST00000314358 PKD1P98161 4303 aa6.92□□□□□ -1.3
KDM3B-201ENST00000314358 HYDINQ4G0P3 5121 aa6.91□□□□□ -1.3
KDM3B-201ENST00000314358 PCLOQ9Y6V0 5065 aa6.8□□□□□ -1.32
KDM3B-201ENST00000314358 LCE2DQ5TA82 110 aaPredicted RBP6.78□□□□□ -1.32
KDM3B-201ENST00000314358 MT4P47944 62 aa6.75□□□□□ -1.33
KDM3B-201ENST00000314358 PKHD1P08F94 4074 aa6.72□□□□□ -1.33
KDM3B-201ENST00000314358 TNXBP22105 4242 aa6.69□□□□□ -1.34
KDM3B-201ENST00000314358 PRM1P04553 51 aa6.68□□□□□ -1.34
KDM3B-201ENST00000314358 LRP2P98164 4655 aa6.68□□□□□ -1.34
KDM3B-201ENST00000314358 KRTAP19-2Q3LHN2 52 aa6.68□□□□□ -1.34
KDM3B-201ENST00000314358 SPRR5A0A1B0GTR4 108 aa6.67□□□□□ -1.34
KDM3B-201ENST00000314358 KRTAP19-3Q7Z4W3 81 aa6.67□□□□□ -1.34
KDM3B-201ENST00000314358 LOC100996750A0A140TA64 210 aa6.65□□□□□ -1.35
KDM3B-201ENST00000314358 LCE1BQ5T7P3 118 aa6.62□□□□□ -1.35
KDM3B-201ENST00000314358 MT1LQ93083 61 aa6.59□□□□□ -1.35
KDM3B-201ENST00000314358 KRTAP9-2Q9BYQ4 174 aa6.57□□□□□ -1.36
KDM3B-201ENST00000314358 MT1EP04732 61 aa6.52□□□□□ -1.37
KDM3B-201ENST00000314358 MUC17Q685J3 4493 aa6.52□□□□□ -1.37
KDM3B-201ENST00000314358 KRTAP4-3Q9BYR4 195 aa6.52□□□□□ -1.37
KDM3B-201ENST00000314358 LCE1DQ5T752 114 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms