RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 LORP23490 312 aaPredicted RBP5.75□□□□□ -1.49
CLCN6-201ENST00000312413 CSMD3Q7Z407 3707 aa5.64□□□□□ -1.51
CLCN6-201ENST00000312413 HUWE1Q7Z6Z7 4374 aaKnown RBP5.59□□□□□ -1.51
CLCN6-201ENST00000312413 AKAP9Q99996 3911 aa5.53□□□□□ -1.52
CLCN6-201ENST00000312413 KRTAP8-1Q8IUC2 63 aa5.51□□□□□ -1.53
CLCN6-201ENST00000312413 DNAH9Q9NYC9 4486 aa5.36□□□□□ -1.55
CLCN6-201ENST00000312413 DNAH1Q9P2D7 4330 aa5.35□□□□□ -1.55
CLCN6-201ENST00000312413 ZNF469Q96JG9 3925 aaPredicted RBP5.35□□□□□ -1.55
CLCN6-201ENST00000312413 DNAH10Q8IVF4 4471 aa5.32□□□□□ -1.56
CLCN6-201ENST00000312413 DNAH11Q96DT5 4516 aa5.29□□□□□ -1.56
CLCN6-201ENST00000312413 SPRR2GQ9BYE4 73 aa5.29□□□□□ -1.56
CLCN6-201ENST00000312413 KRTAP4-1Q9BYQ7 146 aa5.29□□□□□ -1.56
CLCN6-201ENST00000312413 MT2AP02795 61 aa5.23□□□□□ -1.57
CLCN6-201ENST00000312413 MT1HP80294 61 aa5.23□□□□□ -1.57
CLCN6-201ENST00000312413 DNAH5Q8TE73 4624 aa5.22□□□□□ -1.57
CLCN6-201ENST00000312413 DNHD1Q96M86 4753 aa5.21□□□□□ -1.58
CLCN6-201ENST00000312413 LCE3CQ5T5A8 94 aa5.21□□□□□ -1.58
CLCN6-201ENST00000312413 DNAH2Q9P225 4427 aa5.2□□□□□ -1.58
CLCN6-201ENST00000312413 KRTAP19-5Q3LI72 72 aa5.2□□□□□ -1.58
CLCN6-201ENST00000312413 FAT1Q14517 4588 aa5.2□□□□□ -1.58
CLCN6-201ENST00000312413 PLECQ15149 4684 aaKnown RBP5.17□□□□□ -1.58
CLCN6-201ENST00000312413 KRTAP10-7P60409 375 aaPredicted RBP5.13□□□□□ -1.59
CLCN6-201ENST00000312413 VPS13DQ5THJ4 4388 aa5.12□□□□□ -1.59
CLCN6-201ENST00000312413 KRTAP19-4Q3LI73 84 aa5.11□□□□□ -1.59
CLCN6-201ENST00000312413 MT1FP04733 61 aa5.11□□□□□ -1.59
CLCN6-201ENST00000312413 DNAH3Q8TD57 4116 aa5.11□□□□□ -1.59
CLCN6-201ENST00000312413 DNAH17Q9UFH2 4485 aa5.08□□□□□ -1.6
CLCN6-201ENST00000312413 DYNC1H1Q14204 4646 aaKnown RBP5.06□□□□□ -1.6
CLCN6-201ENST00000312413 SPRR2FQ96RM1 72 aa5.05□□□□□ -1.6
CLCN6-201ENST00000312413 DNAH8Q96JB1 4490 aa5.01□□□□□ -1.61
CLCN6-201ENST00000312413 DNAH6Q9C0G6 4158 aa4.97□□□□□ -1.61
CLCN6-201ENST00000312413 DYNC2H1Q8NCM8 4307 aaKnown RBP4.97□□□□□ -1.61
CLCN6-201ENST00000312413 FAT2Q9NYQ8 4349 aa4.95□□□□□ -1.62
CLCN6-201ENST00000312413 ANK2Q01484 3957 aa4.95□□□□□ -1.62
CLCN6-201ENST00000312413 LRP1BQ9NZR2 4599 aa4.92□□□□□ -1.62
CLCN6-201ENST00000312413 RYR1P21817 5038 aa4.92□□□□□ -1.62
CLCN6-201ENST00000312413 STARD9Q9P2P6 4700 aa4.92□□□□□ -1.62
CLCN6-201ENST00000312413 SACSQ9NZJ4 4579 aa4.88□□□□□ -1.63
CLCN6-201ENST00000312413 CMYA5Q8N3K9 4069 aa4.88□□□□□ -1.63
CLCN6-201ENST00000312413 KRTAP12-4P60329 112 aa4.87□□□□□ -1.63
CLCN6-201ENST00000312413 KRTAP19-8Q3LI54 63 aa4.86□□□□□ -1.63
CLCN6-201ENST00000312413 FRAS1Q86XX4 4008 aa4.86□□□□□ -1.63
CLCN6-201ENST00000312413 LCE3BQ5TA77 95 aa4.85□□□□□ -1.63
CLCN6-201ENST00000312413 KRTAP19-1Q8IUB9 90 aa4.85□□□□□ -1.63
CLCN6-201ENST00000312413 KMT2AQ03164 3969 aa4.82□□□□□ -1.64
CLCN6-201ENST00000312413 PRKDCP78527 4128 aaKnown RBP4.81□□□□□ -1.64
CLCN6-201ENST00000312413 SPRR5A0A1B0GTR4 108 aa4.81□□□□□ -1.64
CLCN6-201ENST00000312413 HERC1Q15751 4861 aa4.79□□□□□ -1.64
CLCN6-201ENST00000312413 VPS13BQ7Z7G8 4022 aa4.79□□□□□ -1.64
CLCN6-201ENST00000312413 APOBP04114 4563 aaKnown RBP4.76□□□□□ -1.65
CLCN6-201ENST00000312413 MT1XP80297 61 aa4.76□□□□□ -1.65
CLCN6-201ENST00000312413 HECTD4Q9Y4D8 3996 aa4.75□□□□□ -1.65
CLCN6-201ENST00000312413 LYSTQ99698 3801 aa4.75□□□□□ -1.65
CLCN6-201ENST00000312413 RYR3Q15413 4870 aa4.74□□□□□ -1.65
CLCN6-201ENST00000312413 MT1GP13640 62 aa4.73□□□□□ -1.65
CLCN6-201ENST00000312413 FAT3Q8TDW7 4589 aa4.73□□□□□ -1.65
CLCN6-201ENST00000312413 RYR2Q92736 4967 aa4.72□□□□□ -1.65
CLCN6-201ENST00000312413 KRTAP17-1Q9BYP8 105 aa4.71□□□□□ -1.65
CLCN6-201ENST00000312413 MYCBP2O75592 4640 aa4.71□□□□□ -1.66
CLCN6-201ENST00000312413 LRP1Q07954 4544 aaKnown RBP4.69□□□□□ -1.66
CLCN6-201ENST00000312413 HSPG2P98160 4391 aa4.69□□□□□ -1.66
CLCN6-201ENST00000312413 DNAH7Q8WXX0 4024 aa4.68□□□□□ -1.66
CLCN6-201ENST00000312413 SPRR2EP22531 72 aa4.67□□□□□ -1.66
CLCN6-201ENST00000312413 SPRR2BP35325 72 aa4.67□□□□□ -1.66
CLCN6-201ENST00000312413 SPRR2AP35326 72 aa4.67□□□□□ -1.66
CLCN6-201ENST00000312413 BIRC6Q9NR09 4857 aa4.66□□□□□ -1.66
CLCN6-201ENST00000312413 MT1BP07438 61 aa4.66□□□□□ -1.66
CLCN6-201ENST00000312413 LCE3DQ9BYE3 92 aa4.65□□□□□ -1.67
CLCN6-201ENST00000312413 KIAA1109Q2LD37 5005 aa4.64□□□□□ -1.67
CLCN6-201ENST00000312413 LCE3EQ5T5B0 92 aa4.6□□□□□ -1.67
CLCN6-201ENST00000312413 KRTAP4-8A0A0G2JLE6 195 aa4.58□□□□□ -1.68
CLCN6-201ENST00000312413 KRTAP4-8Q9BYQ9 185 aa4.58□□□□□ -1.68
CLCN6-201ENST00000312413 LCE2BO14633 110 aa4.54□□□□□ -1.68
CLCN6-201ENST00000312413 KRTAP9-8Q9BYQ0 159 aa4.53□□□□□ -1.68
CLCN6-201ENST00000312413 SPRR2DP22532 72 aa4.52□□□□□ -1.69
CLCN6-201ENST00000312413 HERC2O95714 4834 aa4.5□□□□□ -1.69
CLCN6-201ENST00000312413 PKHD1L1Q86WI1 4243 aa4.49□□□□□ -1.69
CLCN6-201ENST00000312413 LCE2CQ5TA81 110 aa4.45□□□□□ -1.7
CLCN6-201ENST00000312413 KRTAP9-3Q9BYQ3 159 aa4.44□□□□□ -1.7
CLCN6-201ENST00000312413 MT1LQ93083 61 aa4.4□□□□□ -1.71
CLCN6-201ENST00000312413 KRTAP19-3Q7Z4W3 81 aa4.39□□□□□ -1.71
CLCN6-201ENST00000312413 KRTAP4-7Q9BYR0 210 aa4.38□□□□□ -1.71
CLCN6-201ENST00000312413 PCLOQ9Y6V0 5065 aa4.36□□□□□ -1.71
CLCN6-201ENST00000312413 PKD1P98161 4303 aa4.34□□□□□ -1.71
CLCN6-201ENST00000312413 LRP2P98164 4655 aa4.32□□□□□ -1.72
CLCN6-201ENST00000312413 HYDINQ4G0P3 5121 aa4.31□□□□□ -1.72
CLCN6-201ENST00000312413 MT1EP04732 61 aa4.31□□□□□ -1.72
CLCN6-201ENST00000312413 LPAP08519 4548 aa4.28□□□□□ -1.72
CLCN6-201ENST00000312413 PRM1P04553 51 aa4.28□□□□□ -1.72
CLCN6-201ENST00000312413 PKHD1P08F94 4074 aa4.27□□□□□ -1.73
CLCN6-201ENST00000312413 LCE2DQ5TA82 110 aaPredicted RBP4.26□□□□□ -1.73
CLCN6-201ENST00000312413 KRTAP9-2Q9BYQ4 174 aa4.25□□□□□ -1.73
CLCN6-201ENST00000312413 KRTAP19-2Q3LHN2 52 aa4.24□□□□□ -1.73
CLCN6-201ENST00000312413 SYNE1Q8NF91 8797 aaKnown RBP4.24□□□□□ -1.73
CLCN6-201ENST00000312413 MT3P25713 68 aa4.22□□□□□ -1.73
CLCN6-201ENST00000312413 TNXBP22105 4242 aa4.21□□□□□ -1.74
CLCN6-201ENST00000312413 MUC17Q685J3 4493 aa4.19□□□□□ -1.74
CLCN6-201ENST00000312413 KRTAP19-6Q3LI70 58 aa4.19□□□□□ -1.74
CLCN6-201ENST00000312413 MT1MQ8N339 61 aa4.18□□□□□ -1.74
CLCN6-201ENST00000312413 KMT2CQ8NEZ4 4911 aaKnown RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms