RNA–Protein interactions for RNA: ENST00000309996.6

SPTBN2-201, Transcript of spectrin beta, non-erythrocytic 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN2, Length 7,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2-201ENST00000309996 MT1HL1P0DM35 61 aa5.48□□□□□ -1.53
SPTBN2-201ENST00000309996 ZNF469Q96JG9 3925 aaPredicted RBP5.47□□□□□ -1.53
SPTBN2-201ENST00000309996 KRTAP10-7P60409 375 aaPredicted RBP5.4□□□□□ -1.55
SPTBN2-201ENST00000309996 KRTAP4-5Q9BYR2 181 aa5.38□□□□□ -1.55
SPTBN2-201ENST00000309996 HUWE1Q7Z6Z7 4374 aaKnown RBP5.35□□□□□ -1.55
SPTBN2-201ENST00000309996 FRAS1Q86XX4 4008 aa5.3□□□□□ -1.56
SPTBN2-201ENST00000309996 ALMS1Q8TCU4 4167 aa5.3□□□□□ -1.56
SPTBN2-201ENST00000309996 SPRR2FQ96RM1 72 aa5.3□□□□□ -1.56
SPTBN2-201ENST00000309996 LYSTQ99698 3801 aa5.28□□□□□ -1.56
SPTBN2-201ENST00000309996 KRTAP10-4P60372 401 aaPredicted RBP5.24□□□□□ -1.57
SPTBN2-201ENST00000309996 SPRR2EP22531 72 aa5.09□□□□□ -1.59
SPTBN2-201ENST00000309996 SPRR2BP35325 72 aa5.09□□□□□ -1.59
SPTBN2-201ENST00000309996 SPRR2AP35326 72 aa5.09□□□□□ -1.59
SPTBN2-201ENST00000309996 CMYA5Q8N3K9 4069 aa5.08□□□□□ -1.6
SPTBN2-201ENST00000309996 DNAH1Q9P2D7 4330 aa5.06□□□□□ -1.6
SPTBN2-201ENST00000309996 KMT2AQ03164 3969 aa5.03□□□□□ -1.6
SPTBN2-201ENST00000309996 DNAH2Q9P225 4427 aa5.03□□□□□ -1.6
SPTBN2-201ENST00000309996 ANK2Q01484 3957 aa5.01□□□□□ -1.61
SPTBN2-201ENST00000309996 VPS13BQ7Z7G8 4022 aa4.99□□□□□ -1.61
SPTBN2-201ENST00000309996 DNAH9Q9NYC9 4486 aa4.98□□□□□ -1.61
SPTBN2-201ENST00000309996 MT1HP80294 61 aa4.96□□□□□ -1.62
SPTBN2-201ENST00000309996 DNAH3Q8TD57 4116 aa4.94□□□□□ -1.62
SPTBN2-201ENST00000309996 KRTAP19-5Q3LI72 72 aa4.93□□□□□ -1.62
SPTBN2-201ENST00000309996 DNAH7Q8WXX0 4024 aa4.93□□□□□ -1.62
SPTBN2-201ENST00000309996 SPRR2DP22532 72 aa4.93□□□□□ -1.62
SPTBN2-201ENST00000309996 DNAH5Q8TE73 4624 aa4.92□□□□□ -1.62
SPTBN2-201ENST00000309996 LCE3CQ5T5A8 94 aa4.9□□□□□ -1.62
SPTBN2-201ENST00000309996 DNAH10Q8IVF4 4471 aa4.89□□□□□ -1.63
SPTBN2-201ENST00000309996 KRTAP4-1Q9BYQ7 146 aa4.89□□□□□ -1.63
SPTBN2-201ENST00000309996 HECTD4Q9Y4D8 3996 aa4.87□□□□□ -1.63
SPTBN2-201ENST00000309996 SPRR2GQ9BYE4 73 aa4.87□□□□□ -1.63
SPTBN2-201ENST00000309996 LCE3BQ5TA77 95 aa4.86□□□□□ -1.63
SPTBN2-201ENST00000309996 KRTAP12-4P60329 112 aa4.86□□□□□ -1.63
SPTBN2-201ENST00000309996 LCE2BO14633 110 aa4.85□□□□□ -1.63
SPTBN2-201ENST00000309996 PLECQ15149 4684 aaKnown RBP4.83□□□□□ -1.64
SPTBN2-201ENST00000309996 DNAH11Q96DT5 4516 aa4.83□□□□□ -1.64
SPTBN2-201ENST00000309996 MT2AP02795 61 aa4.81□□□□□ -1.64
SPTBN2-201ENST00000309996 PRKDCP78527 4128 aaKnown RBP4.8□□□□□ -1.64
SPTBN2-201ENST00000309996 DNAH17Q9UFH2 4485 aa4.73□□□□□ -1.65
SPTBN2-201ENST00000309996 DNAH8Q96JB1 4490 aa4.71□□□□□ -1.65
SPTBN2-201ENST00000309996 KRTAP19-4Q3LI73 84 aa4.71□□□□□ -1.66
SPTBN2-201ENST00000309996 MT1FP04733 61 aa4.7□□□□□ -1.66
SPTBN2-201ENST00000309996 VPS13DQ5THJ4 4388 aa4.7□□□□□ -1.66
SPTBN2-201ENST00000309996 FAT1Q14517 4588 aa4.7□□□□□ -1.66
SPTBN2-201ENST00000309996 DNAH6Q9C0G6 4158 aa4.69□□□□□ -1.66
SPTBN2-201ENST00000309996 FAT2Q9NYQ8 4349 aa4.69□□□□□ -1.66
SPTBN2-201ENST00000309996 LRP1BQ9NZR2 4599 aa4.65□□□□□ -1.67
SPTBN2-201ENST00000309996 LCE2CQ5TA81 110 aa4.64□□□□□ -1.67
SPTBN2-201ENST00000309996 STARD9Q9P2P6 4700 aa4.62□□□□□ -1.67
SPTBN2-201ENST00000309996 DYNC1H1Q14204 4646 aaKnown RBP4.61□□□□□ -1.67
SPTBN2-201ENST00000309996 DYNC2H1Q8NCM8 4307 aaKnown RBP4.6□□□□□ -1.67
SPTBN2-201ENST00000309996 MT1GP13640 62 aa4.59□□□□□ -1.67
SPTBN2-201ENST00000309996 SPRR5A0A1B0GTR4 108 aa4.58□□□□□ -1.68
SPTBN2-201ENST00000309996 FLGP20930 4061 aaPredicted RBP4.57□□□□□ -1.68
SPTBN2-201ENST00000309996 SACSQ9NZJ4 4579 aa4.55□□□□□ -1.68
SPTBN2-201ENST00000309996 LCE2DQ5TA82 110 aaPredicted RBP4.55□□□□□ -1.68
SPTBN2-201ENST00000309996 DNHD1Q96M86 4753 aa4.52□□□□□ -1.69
SPTBN2-201ENST00000309996 APOBP04114 4563 aaKnown RBP4.48□□□□□ -1.69
SPTBN2-201ENST00000309996 RYR1P21817 5038 aa4.48□□□□□ -1.69
SPTBN2-201ENST00000309996 LCE3DQ9BYE3 92 aa4.46□□□□□ -1.69
SPTBN2-201ENST00000309996 MT4P47944 62 aa4.44□□□□□ -1.7
SPTBN2-201ENST00000309996 LCE3EQ5T5B0 92 aa4.42□□□□□ -1.7
SPTBN2-201ENST00000309996 KRTAP19-8Q3LI54 63 aa4.36□□□□□ -1.71
SPTBN2-201ENST00000309996 MYCBP2O75592 4640 aa4.36□□□□□ -1.71
SPTBN2-201ENST00000309996 KRTAP19-1Q8IUB9 90 aa4.34□□□□□ -1.71
SPTBN2-201ENST00000309996 MT1XP80297 61 aa4.34□□□□□ -1.71
SPTBN2-201ENST00000309996 KRTAP17-1Q9BYP8 105 aa4.31□□□□□ -1.72
SPTBN2-201ENST00000309996 LCE1BQ5T7P3 118 aa4.29□□□□□ -1.72
SPTBN2-201ENST00000309996 PKHD1P08F94 4074 aa4.29□□□□□ -1.72
SPTBN2-201ENST00000309996 FAT3Q8TDW7 4589 aa4.27□□□□□ -1.73
SPTBN2-201ENST00000309996 LCE1DQ5T752 114 aa4.24□□□□□ -1.73
SPTBN2-201ENST00000309996 RYR3Q15413 4870 aa4.23□□□□□ -1.73
SPTBN2-201ENST00000309996 KRTAP4-8A0A0G2JLE6 195 aa4.23□□□□□ -1.73
SPTBN2-201ENST00000309996 KRTAP4-8Q9BYQ9 185 aa4.23□□□□□ -1.73
SPTBN2-201ENST00000309996 LRP1Q07954 4544 aaKnown RBP4.22□□□□□ -1.73
SPTBN2-201ENST00000309996 PKHD1L1Q86WI1 4243 aa4.2□□□□□ -1.74
SPTBN2-201ENST00000309996 MT1BP07438 61 aa4.19□□□□□ -1.74
SPTBN2-201ENST00000309996 KRTAP9-8Q9BYQ0 159 aa4.14□□□□□ -1.75
SPTBN2-201ENST00000309996 HSPG2P98160 4391 aa4.13□□□□□ -1.75
SPTBN2-201ENST00000309996 PKD1P98161 4303 aa4.13□□□□□ -1.75
SPTBN2-201ENST00000309996 KRTAP19-3Q7Z4W3 81 aa4.13□□□□□ -1.75
SPTBN2-201ENST00000309996 LCE5AQ5TCM9 118 aa4.11□□□□□ -1.75
SPTBN2-201ENST00000309996 MT3P25713 68 aa4.1□□□□□ -1.75
SPTBN2-201ENST00000309996 MT1LQ93083 61 aa4.07□□□□□ -1.76
SPTBN2-201ENST00000309996 LPAP08519 4548 aa4.05□□□□□ -1.76
SPTBN2-201ENST00000309996 PRM1P04553 51 aa4.05□□□□□ -1.76
SPTBN2-201ENST00000309996 KRTAP9-2Q9BYQ4 174 aa4.04□□□□□ -1.76
SPTBN2-201ENST00000309996 KRTAP9-3Q9BYQ3 159 aa4.03□□□□□ -1.76
SPTBN2-201ENST00000309996 KRTAP4-7Q9BYR0 210 aa4.03□□□□□ -1.76
SPTBN2-201ENST00000309996 KIAA1109Q2LD37 5005 aa4.02□□□□□ -1.77
SPTBN2-201ENST00000309996 LRP2P98164 4655 aa4□□□□□ -1.77
SPTBN2-201ENST00000309996 KRTAP20-1Q3LI63 56 aa4□□□□□ -1.77
SPTBN2-201ENST00000309996 RYR2Q92736 4967 aa3.99□□□□□ -1.77
SPTBN2-201ENST00000309996 KRTAP9-6A0A140TA67 174 aa3.98□□□□□ -1.77
SPTBN2-201ENST00000309996 TNXBP22105 4242 aa3.97□□□□□ -1.77
SPTBN2-201ENST00000309996 LCE1CQ5T751 118 aa3.96□□□□□ -1.78
SPTBN2-201ENST00000309996 LCE1EQ5T753 118 aa3.96□□□□□ -1.78
SPTBN2-201ENST00000309996 LCE1FQ5T754 118 aa3.96□□□□□ -1.78
SPTBN2-201ENST00000309996 LCE1AQ5T7P2 110 aa3.96□□□□□ -1.78
SPTBN2-201ENST00000309996 MT1EP04732 61 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms