RNA–Protein interactions for RNA: ENST00000308249.3

PPM1E-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPM1E, Length 6,542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1E-201ENST00000308249 KRTAP10-7P60409 375 aaPredicted RBP6.32□□□□□ -1.4
PPM1E-201ENST00000308249 SPRR2FQ96RM1 72 aa6.27□□□□□ -1.41
PPM1E-201ENST00000308249 KRTAP10-4P60372 401 aaPredicted RBP6.18□□□□□ -1.42
PPM1E-201ENST00000308249 ANK3Q12955 4377 aaKnown RBP6.13□□□□□ -1.43
PPM1E-201ENST00000308249 KRTAP19-5Q3LI72 72 aa6.11□□□□□ -1.43
PPM1E-201ENST00000308249 MT1HP80294 61 aa6.03□□□□□ -1.44
PPM1E-201ENST00000308249 LCE3CQ5T5A8 94 aa6.01□□□□□ -1.45
PPM1E-201ENST00000308249 LCE3BQ5TA77 95 aa5.95□□□□□ -1.46
PPM1E-201ENST00000308249 MT2AP02795 61 aa5.94□□□□□ -1.46
PPM1E-201ENST00000308249 KRTAP4-1Q9BYQ7 146 aa5.94□□□□□ -1.46
PPM1E-201ENST00000308249 CSMD3Q7Z407 3707 aa5.92□□□□□ -1.46
PPM1E-201ENST00000308249 AKAP9Q99996 3911 aa5.91□□□□□ -1.46
PPM1E-201ENST00000308249 SPRR2EP22531 72 aa5.9□□□□□ -1.46
PPM1E-201ENST00000308249 SPRR2BP35325 72 aa5.9□□□□□ -1.46
PPM1E-201ENST00000308249 SPRR2AP35326 72 aa5.9□□□□□ -1.46
PPM1E-201ENST00000308249 SPRR2GQ9BYE4 73 aa5.82□□□□□ -1.48
PPM1E-201ENST00000308249 MT1FP04733 61 aa5.81□□□□□ -1.48
PPM1E-201ENST00000308249 HUWE1Q7Z6Z7 4374 aaKnown RBP5.8□□□□□ -1.48
PPM1E-201ENST00000308249 ALMS1Q8TCU4 4167 aa5.78□□□□□ -1.48
PPM1E-201ENST00000308249 KRTAP12-4P60329 112 aa5.74□□□□□ -1.49
PPM1E-201ENST00000308249 SPRR2DP22532 72 aa5.7□□□□□ -1.5
PPM1E-201ENST00000308249 MT1GP13640 62 aa5.7□□□□□ -1.5
PPM1E-201ENST00000308249 LCE2BO14633 110 aa5.6□□□□□ -1.51
PPM1E-201ENST00000308249 DNAH2Q9P225 4427 aa5.55□□□□□ -1.52
PPM1E-201ENST00000308249 FAT1Q14517 4588 aa5.51□□□□□ -1.53
PPM1E-201ENST00000308249 LCE3DQ9BYE3 92 aa5.51□□□□□ -1.53
PPM1E-201ENST00000308249 KRTAP19-4Q3LI73 84 aa5.5□□□□□ -1.53
PPM1E-201ENST00000308249 DNAH10Q8IVF4 4471 aa5.45□□□□□ -1.54
PPM1E-201ENST00000308249 ANK2Q01484 3957 aa5.45□□□□□ -1.54
PPM1E-201ENST00000308249 DNAH9Q9NYC9 4486 aa5.45□□□□□ -1.54
PPM1E-201ENST00000308249 DNHD1Q96M86 4753 aa5.43□□□□□ -1.54
PPM1E-201ENST00000308249 DNAH5Q8TE73 4624 aa5.42□□□□□ -1.54
PPM1E-201ENST00000308249 LCE3EQ5T5B0 92 aa5.39□□□□□ -1.55
PPM1E-201ENST00000308249 PLECQ15149 4684 aaKnown RBP5.39□□□□□ -1.55
PPM1E-201ENST00000308249 PRKDCP78527 4128 aaKnown RBP5.36□□□□□ -1.55
PPM1E-201ENST00000308249 DNAH1Q9P2D7 4330 aa5.34□□□□□ -1.55
PPM1E-201ENST00000308249 LCE2CQ5TA81 110 aa5.33□□□□□ -1.56
PPM1E-201ENST00000308249 KRTAP4-8A0A0G2JLE6 195 aa5.33□□□□□ -1.56
PPM1E-201ENST00000308249 KRTAP4-8Q9BYQ9 185 aa5.33□□□□□ -1.56
PPM1E-201ENST00000308249 DNAH17Q9UFH2 4485 aa5.33□□□□□ -1.56
PPM1E-201ENST00000308249 DNAH11Q96DT5 4516 aa5.32□□□□□ -1.56
PPM1E-201ENST00000308249 MT1XP80297 61 aa5.28□□□□□ -1.56
PPM1E-201ENST00000308249 LCE2DQ5TA82 110 aaPredicted RBP5.28□□□□□ -1.56
PPM1E-201ENST00000308249 LYSTQ99698 3801 aa5.28□□□□□ -1.56
PPM1E-201ENST00000308249 STARD9Q9P2P6 4700 aa5.27□□□□□ -1.57
PPM1E-201ENST00000308249 DNAH8Q96JB1 4490 aa5.27□□□□□ -1.57
PPM1E-201ENST00000308249 KMT2AQ03164 3969 aa5.25□□□□□ -1.57
PPM1E-201ENST00000308249 KRTAP19-8Q3LI54 63 aa5.24□□□□□ -1.57
PPM1E-201ENST00000308249 KRTAP19-1Q8IUB9 90 aa5.23□□□□□ -1.57
PPM1E-201ENST00000308249 MT4P47944 62 aa5.18□□□□□ -1.58
PPM1E-201ENST00000308249 CMYA5Q8N3K9 4069 aa5.16□□□□□ -1.58
PPM1E-201ENST00000308249 LCE1BQ5T7P3 118 aa5.16□□□□□ -1.58
PPM1E-201ENST00000308249 VPS13DQ5THJ4 4388 aa5.15□□□□□ -1.59
PPM1E-201ENST00000308249 DNAH7Q8WXX0 4024 aa5.13□□□□□ -1.59
PPM1E-201ENST00000308249 PRM1P04553 51 aa5.12□□□□□ -1.59
PPM1E-201ENST00000308249 MT1BP07438 61 aa5.11□□□□□ -1.59
PPM1E-201ENST00000308249 SPRR5A0A1B0GTR4 108 aa5.1□□□□□ -1.59
PPM1E-201ENST00000308249 KRTAP4-7Q9BYR0 210 aa5.1□□□□□ -1.59
PPM1E-201ENST00000308249 LRP1BQ9NZR2 4599 aa5.08□□□□□ -1.6
PPM1E-201ENST00000308249 FAT3Q8TDW7 4589 aa5.08□□□□□ -1.6
PPM1E-201ENST00000308249 DNAH3Q8TD57 4116 aa5.08□□□□□ -1.6
PPM1E-201ENST00000308249 LCE1DQ5T752 114 aa5.06□□□□□ -1.6
PPM1E-201ENST00000308249 LRP1Q07954 4544 aaKnown RBP5.04□□□□□ -1.6
PPM1E-201ENST00000308249 KRTAP19-3Q7Z4W3 81 aa5.02□□□□□ -1.61
PPM1E-201ENST00000308249 FAT2Q9NYQ8 4349 aa5.02□□□□□ -1.61
PPM1E-201ENST00000308249 FRAS1Q86XX4 4008 aa5.01□□□□□ -1.61
PPM1E-201ENST00000308249 DNAH6Q9C0G6 4158 aa5□□□□□ -1.61
PPM1E-201ENST00000308249 SACSQ9NZJ4 4579 aa4.99□□□□□ -1.61
PPM1E-201ENST00000308249 DYNC1H1Q14204 4646 aaKnown RBP4.98□□□□□ -1.61
PPM1E-201ENST00000308249 MT3P25713 68 aa4.97□□□□□ -1.61
PPM1E-201ENST00000308249 VPS13BQ7Z7G8 4022 aa4.97□□□□□ -1.61
PPM1E-201ENST00000308249 KRTAP9-8Q9BYQ0 159 aa4.95□□□□□ -1.62
PPM1E-201ENST00000308249 RYR1P21817 5038 aa4.94□□□□□ -1.62
PPM1E-201ENST00000308249 DYNC2H1Q8NCM8 4307 aaKnown RBP4.94□□□□□ -1.62
PPM1E-201ENST00000308249 MYCBP2O75592 4640 aa4.94□□□□□ -1.62
PPM1E-201ENST00000308249 APOBP04114 4563 aaKnown RBP4.9□□□□□ -1.62
PPM1E-201ENST00000308249 PKHD1P08F94 4074 aa4.9□□□□□ -1.62
PPM1E-201ENST00000308249 HYDINQ4G0P3 5121 aa4.9□□□□□ -1.63
PPM1E-201ENST00000308249 MT1LQ93083 61 aa4.9□□□□□ -1.63
PPM1E-201ENST00000308249 KIAA1109Q2LD37 5005 aa4.9□□□□□ -1.63
PPM1E-201ENST00000308249 HECTD4Q9Y4D8 3996 aa4.88□□□□□ -1.63
PPM1E-201ENST00000308249 KRTAP9-3Q9BYQ3 159 aa4.87□□□□□ -1.63
PPM1E-201ENST00000308249 LOC100996750A0A140TA64 210 aa4.86□□□□□ -1.63
PPM1E-201ENST00000308249 LCE5AQ5TCM9 118 aa4.83□□□□□ -1.64
PPM1E-201ENST00000308249 MT1EP04732 61 aa4.81□□□□□ -1.64
PPM1E-201ENST00000308249 RYR3Q15413 4870 aa4.81□□□□□ -1.64
PPM1E-201ENST00000308249 KMT2CQ8NEZ4 4911 aaKnown RBP4.78□□□□□ -1.64
PPM1E-201ENST00000308249 KRTAP17-1Q9BYP8 105 aa4.76□□□□□ -1.65
PPM1E-201ENST00000308249 KRTAP4-3Q9BYR4 195 aa4.75□□□□□ -1.65
PPM1E-201ENST00000308249 MT1MQ8N339 61 aa4.74□□□□□ -1.65
PPM1E-201ENST00000308249 KRTAP4-9Q9BYQ8 210 aa4.64□□□□□ -1.67
PPM1E-201ENST00000308249 PKD1P98161 4303 aa4.62□□□□□ -1.67
PPM1E-201ENST00000308249 RYR2Q92736 4967 aa4.62□□□□□ -1.67
PPM1E-201ENST00000308249 LRP2P98164 4655 aa4.61□□□□□ -1.67
PPM1E-201ENST00000308249 LCE1CQ5T751 118 aa4.58□□□□□ -1.68
PPM1E-201ENST00000308249 LCE1EQ5T753 118 aa4.58□□□□□ -1.68
PPM1E-201ENST00000308249 LCE1FQ5T754 118 aa4.58□□□□□ -1.68
PPM1E-201ENST00000308249 LCE1AQ5T7P2 110 aa4.58□□□□□ -1.68
PPM1E-201ENST00000308249 HSPG2P98160 4391 aa4.56□□□□□ -1.68
PPM1E-201ENST00000308249 KRTAP19-6Q3LI70 58 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms