RNA–Protein interactions for RNA: ENST00000306378.10

BPTF-201, Transcript of bromodomain PHD finger transcription factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BPTF, Length 9,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-201ENST00000306378 CRCT1Q9UGL9 99 aa7.97□□□□□ -1.13
BPTF-201ENST00000306378 ZNF469Q96JG9 3925 aaPredicted RBP7.95□□□□□ -1.14
BPTF-201ENST00000306378 HECTD4Q9Y4D8 3996 aa7.94□□□□□ -1.14
BPTF-201ENST00000306378 DNAH7Q8WXX0 4024 aa7.87□□□□□ -1.15
BPTF-201ENST00000306378 MT1HL1P0DM35 61 aa7.77□□□□□ -1.17
BPTF-201ENST00000306378 CSMD2Q7Z408 3487 aa7.7□□□□□ -1.18
BPTF-201ENST00000306378 ANK2Q01484 3957 aa7.66□□□□□ -1.18
BPTF-201ENST00000306378 KRTAP8-1Q8IUC2 63 aa7.62□□□□□ -1.19
BPTF-201ENST00000306378 KRTAP10-4P60372 401 aaPredicted RBP7.56□□□□□ -1.2
BPTF-201ENST00000306378 LCE3CQ5T5A8 94 aa7.54□□□□□ -1.2
BPTF-201ENST00000306378 SPRR2GQ9BYE4 73 aa7.47□□□□□ -1.21
BPTF-201ENST00000306378 DNAH6Q9C0G6 4158 aa7.46□□□□□ -1.21
BPTF-201ENST00000306378 KMT2AQ03164 3969 aa7.42□□□□□ -1.22
BPTF-201ENST00000306378 DNAH2Q9P225 4427 aa7.4□□□□□ -1.22
BPTF-201ENST00000306378 LORP23490 312 aaPredicted RBP7.38□□□□□ -1.23
BPTF-201ENST00000306378 KRTAP10-7P60409 375 aaPredicted RBP7.31□□□□□ -1.24
BPTF-201ENST00000306378 HUWE1Q7Z6Z7 4374 aaKnown RBP7.28□□□□□ -1.24
BPTF-201ENST00000306378 VPS13BQ7Z7G8 4022 aa7.25□□□□□ -1.25
BPTF-201ENST00000306378 DNAH1Q9P2D7 4330 aa7.22□□□□□ -1.25
BPTF-201ENST00000306378 SPRR5A0A1B0GTR4 108 aa7.18□□□□□ -1.26
BPTF-201ENST00000306378 KRTAP19-5Q3LI72 72 aa7.16□□□□□ -1.26
BPTF-201ENST00000306378 MT3P25713 68 aa7.14□□□□□ -1.27
BPTF-201ENST00000306378 FLGP20930 4061 aaPredicted RBP7.09□□□□□ -1.27
BPTF-201ENST00000306378 KRTAP4-5Q9BYR2 181 aa7.09□□□□□ -1.28
BPTF-201ENST00000306378 KRTAP12-4P60329 112 aa7.03□□□□□ -1.28
BPTF-201ENST00000306378 FRAS1Q86XX4 4008 aa6.9□□□□□ -1.31
BPTF-201ENST00000306378 DNAH10Q8IVF4 4471 aa6.85□□□□□ -1.31
BPTF-201ENST00000306378 MT2AP02795 61 aa6.83□□□□□ -1.32
BPTF-201ENST00000306378 PRKDCP78527 4128 aaKnown RBP6.83□□□□□ -1.32
BPTF-201ENST00000306378 MT1HP80294 61 aa6.82□□□□□ -1.32
BPTF-201ENST00000306378 ANK3Q12955 4377 aaKnown RBP6.8□□□□□ -1.32
BPTF-201ENST00000306378 SPRR2FQ96RM1 72 aa6.78□□□□□ -1.32
BPTF-201ENST00000306378 LCE3BQ5TA77 95 aa6.72□□□□□ -1.33
BPTF-201ENST00000306378 LCE3DQ9BYE3 92 aa6.69□□□□□ -1.34
BPTF-201ENST00000306378 KRTAP19-8Q3LI54 63 aa6.65□□□□□ -1.35
BPTF-201ENST00000306378 LCE3EQ5T5B0 92 aa6.65□□□□□ -1.35
BPTF-201ENST00000306378 MT1FP04733 61 aa6.6□□□□□ -1.35
BPTF-201ENST00000306378 KRTAP4-1Q9BYQ7 146 aa6.57□□□□□ -1.36
BPTF-201ENST00000306378 PKHD1P08F94 4074 aa6.51□□□□□ -1.37
BPTF-201ENST00000306378 MT1XP80297 61 aa6.45□□□□□ -1.38
BPTF-201ENST00000306378 DNAH11Q96DT5 4516 aa6.45□□□□□ -1.38
BPTF-201ENST00000306378 MT1GP13640 62 aa6.41□□□□□ -1.38
BPTF-201ENST00000306378 KRTAP19-1Q8IUB9 90 aa6.38□□□□□ -1.39
BPTF-201ENST00000306378 FAT2Q9NYQ8 4349 aa6.36□□□□□ -1.39
BPTF-201ENST00000306378 SPRR2EP22531 72 aa6.34□□□□□ -1.4
BPTF-201ENST00000306378 SPRR2BP35325 72 aa6.34□□□□□ -1.4
BPTF-201ENST00000306378 SPRR2AP35326 72 aa6.34□□□□□ -1.4
BPTF-201ENST00000306378 LRP1Q07954 4544 aaKnown RBP6.34□□□□□ -1.4
BPTF-201ENST00000306378 DNAH17Q9UFH2 4485 aa6.33□□□□□ -1.4
BPTF-201ENST00000306378 VPS13DQ5THJ4 4388 aa6.32□□□□□ -1.4
BPTF-201ENST00000306378 MT1LQ93083 61 aa6.3□□□□□ -1.4
BPTF-201ENST00000306378 DYNC2H1Q8NCM8 4307 aaKnown RBP6.3□□□□□ -1.4
BPTF-201ENST00000306378 LCE2BO14633 110 aa6.27□□□□□ -1.41
BPTF-201ENST00000306378 PKHD1L1Q86WI1 4243 aa6.22□□□□□ -1.41
BPTF-201ENST00000306378 DNAH8Q96JB1 4490 aa6.18□□□□□ -1.42
BPTF-201ENST00000306378 SPRR2DP22532 72 aa6.17□□□□□ -1.42
BPTF-201ENST00000306378 PRM1P04553 51 aa6.14□□□□□ -1.43
BPTF-201ENST00000306378 DNAH9Q9NYC9 4486 aa6.07□□□□□ -1.44
BPTF-201ENST00000306378 KRTAP19-3Q7Z4W3 81 aa6.03□□□□□ -1.44
BPTF-201ENST00000306378 DNAH5Q8TE73 4624 aa6.02□□□□□ -1.45
BPTF-201ENST00000306378 MT1EP04732 61 aa6.02□□□□□ -1.45
BPTF-201ENST00000306378 HSPG2P98160 4391 aa6□□□□□ -1.45
BPTF-201ENST00000306378 MT1BP07438 61 aa5.99□□□□□ -1.45
BPTF-201ENST00000306378 STARD9Q9P2P6 4700 aa5.98□□□□□ -1.45
BPTF-201ENST00000306378 DYNC1H1Q14204 4646 aaKnown RBP5.89□□□□□ -1.47
BPTF-201ENST00000306378 KRTAP2-3P0C7H8 128 aa5.85□□□□□ -1.47
BPTF-201ENST00000306378 KRTAP2-4Q9BYR9 128 aa5.85□□□□□ -1.47
BPTF-201ENST00000306378 KRTAP2-1Q9BYU5 128 aa5.85□□□□□ -1.47
BPTF-201ENST00000306378 PKD1P98161 4303 aa5.83□□□□□ -1.48
BPTF-201ENST00000306378 KRTAP9-8Q9BYQ0 159 aa5.81□□□□□ -1.48
BPTF-201ENST00000306378 LCE2CQ5TA81 110 aa5.78□□□□□ -1.48
BPTF-201ENST00000306378 PLECQ15149 4684 aaKnown RBP5.77□□□□□ -1.49
BPTF-201ENST00000306378 MT1AP04731 61 aa5.74□□□□□ -1.49
BPTF-201ENST00000306378 KRTAP9-3Q9BYQ3 159 aa5.74□□□□□ -1.49
BPTF-201ENST00000306378 APOBP04114 4563 aaKnown RBP5.72□□□□□ -1.49
BPTF-201ENST00000306378 TNXBP22105 4242 aa5.71□□□□□ -1.5
BPTF-201ENST00000306378 MT1MQ8N339 61 aa5.7□□□□□ -1.5
BPTF-201ENST00000306378 FAT1Q14517 4588 aa5.7□□□□□ -1.5
BPTF-201ENST00000306378 KRTAP4-8A0A0G2JLE6 195 aa5.66□□□□□ -1.5
BPTF-201ENST00000306378 KRTAP4-8Q9BYQ9 185 aa5.66□□□□□ -1.5
BPTF-201ENST00000306378 LCE2DQ5TA82 110 aaPredicted RBP5.65□□□□□ -1.51
BPTF-201ENST00000306378 LRP1BQ9NZR2 4599 aa5.59□□□□□ -1.52
BPTF-201ENST00000306378 SACSQ9NZJ4 4579 aa5.57□□□□□ -1.52
BPTF-201ENST00000306378 RYR1P21817 5038 aa5.48□□□□□ -1.53
BPTF-201ENST00000306378 MT4P47944 62 aa5.42□□□□□ -1.54
BPTF-201ENST00000306378 KRTAP4-7Q9BYR0 210 aa5.42□□□□□ -1.54
BPTF-201ENST00000306378 LCE1DQ5T752 114 aa5.41□□□□□ -1.54
BPTF-201ENST00000306378 LCE1BQ5T7P3 118 aa5.35□□□□□ -1.55
BPTF-201ENST00000306378 FAT3Q8TDW7 4589 aa5.34□□□□□ -1.55
BPTF-201ENST00000306378 KRTAP6-2Q3LI66 62 aa5.28□□□□□ -1.56
BPTF-201ENST00000306378 MUC17Q685J3 4493 aa5.28□□□□□ -1.56
BPTF-201ENST00000306378 LOC100996750A0A140TA64 210 aa5.25□□□□□ -1.57
BPTF-201ENST00000306378 MYCBP2O75592 4640 aa5.24□□□□□ -1.57
BPTF-201ENST00000306378 KRTAP19-6Q3LI70 58 aa5.22□□□□□ -1.57
BPTF-201ENST00000306378 KRTAP19-7Q3SYF9 63 aa5.14□□□□□ -1.59
BPTF-201ENST00000306378 DNHD1Q96M86 4753 aa5.12□□□□□ -1.59
BPTF-201ENST00000306378 RYR3Q15413 4870 aa5.12□□□□□ -1.59
BPTF-201ENST00000306378 KRTAP19-2Q3LHN2 52 aa5.11□□□□□ -1.59
BPTF-201ENST00000306378 KRTAP17-1Q9BYP8 105 aa5.11□□□□□ -1.59
BPTF-201ENST00000306378 KRTAP9-2Q9BYQ4 174 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms