RNA–Protein interactions for RNA: ENST00000303538.12

PDS5A-201, Transcript of PDS5 cohesin associated factor A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDS5A, Length 7,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5A-201ENST00000303538 KRTAP3-3Q9BYR6 98 aa7.22□□□□□ -1.25
PDS5A-201ENST00000303538 KRTAP10-5P60370 271 aa7.22□□□□□ -1.25
PDS5A-201ENST00000303538 INE1O15225 51 aa7.21□□□□□ -1.26
PDS5A-201ENST00000303538 KRTAP3-2Q9BYR7 98 aa7.19□□□□□ -1.26
PDS5A-201ENST00000303538 KRTAP10-4P60372 401 aaPredicted RBP7.04□□□□□ -1.28
PDS5A-201ENST00000303538 SPRR2FQ96RM1 72 aa6.91□□□□□ -1.3
PDS5A-201ENST00000303538 FRAS1Q86XX4 4008 aa6.84□□□□□ -1.31
PDS5A-201ENST00000303538 DNAH9Q9NYC9 4486 aa6.84□□□□□ -1.32
PDS5A-201ENST00000303538 MT1HP80294 61 aa6.81□□□□□ -1.32
PDS5A-201ENST00000303538 CMYA5Q8N3K9 4069 aa6.78□□□□□ -1.32
PDS5A-201ENST00000303538 DNAH1Q9P2D7 4330 aa6.78□□□□□ -1.32
PDS5A-201ENST00000303538 KRTAP23-1A1A580 65 aa6.77□□□□□ -1.33
PDS5A-201ENST00000303538 KRTAP4-1Q9BYQ7 146 aa6.71□□□□□ -1.34
PDS5A-201ENST00000303538 KRTAP10-7P60409 375 aaPredicted RBP6.7□□□□□ -1.34
PDS5A-201ENST00000303538 KMT2AQ03164 3969 aa6.7□□□□□ -1.34
PDS5A-201ENST00000303538 SPRR2EP22531 72 aa6.67□□□□□ -1.34
PDS5A-201ENST00000303538 SPRR2BP35325 72 aa6.67□□□□□ -1.34
PDS5A-201ENST00000303538 SPRR2AP35326 72 aa6.67□□□□□ -1.34
PDS5A-201ENST00000303538 ANK2Q01484 3957 aa6.64□□□□□ -1.35
PDS5A-201ENST00000303538 DNAH3Q8TD57 4116 aa6.6□□□□□ -1.35
PDS5A-201ENST00000303538 DNAH10Q8IVF4 4471 aa6.59□□□□□ -1.35
PDS5A-201ENST00000303538 LYSTQ99698 3801 aa6.59□□□□□ -1.35
PDS5A-201ENST00000303538 MT2AP02795 61 aa6.56□□□□□ -1.36
PDS5A-201ENST00000303538 DNAH2Q9P225 4427 aa6.55□□□□□ -1.36
PDS5A-201ENST00000303538 FAT2Q9NYQ8 4349 aa6.51□□□□□ -1.37
PDS5A-201ENST00000303538 KRTAP19-5Q3LI72 72 aa6.49□□□□□ -1.37
PDS5A-201ENST00000303538 VPS13BQ7Z7G8 4022 aa6.48□□□□□ -1.37
PDS5A-201ENST00000303538 DNAH7Q8WXX0 4024 aa6.44□□□□□ -1.38
PDS5A-201ENST00000303538 MT1FP04733 61 aa6.43□□□□□ -1.38
PDS5A-201ENST00000303538 SPRR2DP22532 72 aa6.43□□□□□ -1.38
PDS5A-201ENST00000303538 DNAH5Q8TE73 4624 aa6.41□□□□□ -1.38
PDS5A-201ENST00000303538 SPRR2GQ9BYE4 73 aa6.36□□□□□ -1.39
PDS5A-201ENST00000303538 PRKDCP78527 4128 aaKnown RBP6.36□□□□□ -1.39
PDS5A-201ENST00000303538 PLECQ15149 4684 aaKnown RBP6.33□□□□□ -1.4
PDS5A-201ENST00000303538 LCE3CQ5T5A8 94 aa6.29□□□□□ -1.4
PDS5A-201ENST00000303538 DNAH17Q9UFH2 4485 aa6.27□□□□□ -1.41
PDS5A-201ENST00000303538 DNAH6Q9C0G6 4158 aa6.27□□□□□ -1.41
PDS5A-201ENST00000303538 FAT1Q14517 4588 aa6.27□□□□□ -1.41
PDS5A-201ENST00000303538 DNAH11Q96DT5 4516 aa6.26□□□□□ -1.41
PDS5A-201ENST00000303538 LCE3BQ5TA77 95 aa6.23□□□□□ -1.41
PDS5A-201ENST00000303538 STARD9Q9P2P6 4700 aa6.22□□□□□ -1.41
PDS5A-201ENST00000303538 LCE2BO14633 110 aa6.21□□□□□ -1.42
PDS5A-201ENST00000303538 LRP1BQ9NZR2 4599 aa6.2□□□□□ -1.42
PDS5A-201ENST00000303538 DYNC2H1Q8NCM8 4307 aaKnown RBP6.2□□□□□ -1.42
PDS5A-201ENST00000303538 DNAH8Q96JB1 4490 aa6.19□□□□□ -1.42
PDS5A-201ENST00000303538 KRTAP17-1Q9BYP8 105 aa6.18□□□□□ -1.42
PDS5A-201ENST00000303538 VPS13DQ5THJ4 4388 aa6.16□□□□□ -1.42
PDS5A-201ENST00000303538 MT1GP13640 62 aa6.07□□□□□ -1.44
PDS5A-201ENST00000303538 SACSQ9NZJ4 4579 aa6.01□□□□□ -1.45
PDS5A-201ENST00000303538 KRTAP12-4P60329 112 aa6□□□□□ -1.45
PDS5A-201ENST00000303538 KRTAP19-1Q8IUB9 90 aa5.99□□□□□ -1.45
PDS5A-201ENST00000303538 SPRR5A0A1B0GTR4 108 aa5.95□□□□□ -1.46
PDS5A-201ENST00000303538 DYNC1H1Q14204 4646 aaKnown RBP5.95□□□□□ -1.46
PDS5A-201ENST00000303538 HECTD4Q9Y4D8 3996 aa5.94□□□□□ -1.46
PDS5A-201ENST00000303538 DNHD1Q96M86 4753 aa5.93□□□□□ -1.46
PDS5A-201ENST00000303538 LPAP08519 4548 aa5.92□□□□□ -1.46
PDS5A-201ENST00000303538 LCE2CQ5TA81 110 aa5.92□□□□□ -1.46
PDS5A-201ENST00000303538 RYR1P21817 5038 aa5.91□□□□□ -1.46
PDS5A-201ENST00000303538 MT4P47944 62 aa5.9□□□□□ -1.46
PDS5A-201ENST00000303538 LCE2DQ5TA82 110 aaPredicted RBP5.87□□□□□ -1.47
PDS5A-201ENST00000303538 KRTAP4-8A0A0G2JLE6 195 aa5.87□□□□□ -1.47
PDS5A-201ENST00000303538 KRTAP4-8Q9BYQ9 185 aa5.87□□□□□ -1.47
PDS5A-201ENST00000303538 PKHD1L1Q86WI1 4243 aa5.8□□□□□ -1.48
PDS5A-201ENST00000303538 MT1XP80297 61 aa5.79□□□□□ -1.48
PDS5A-201ENST00000303538 KRTAP19-8Q3LI54 63 aa5.79□□□□□ -1.48
PDS5A-201ENST00000303538 FAT3Q8TDW7 4589 aa5.79□□□□□ -1.48
PDS5A-201ENST00000303538 KRTAP19-4Q3LI73 84 aa5.78□□□□□ -1.48
PDS5A-201ENST00000303538 APOBP04114 4563 aaKnown RBP5.74□□□□□ -1.49
PDS5A-201ENST00000303538 HSPG2P98160 4391 aa5.74□□□□□ -1.49
PDS5A-201ENST00000303538 KRTAP9-2Q9BYQ4 174 aa5.72□□□□□ -1.49
PDS5A-201ENST00000303538 PKHD1P08F94 4074 aa5.68□□□□□ -1.5
PDS5A-201ENST00000303538 MT1BP07438 61 aa5.67□□□□□ -1.5
PDS5A-201ENST00000303538 LCE3DQ9BYE3 92 aa5.67□□□□□ -1.5
PDS5A-201ENST00000303538 PKD1P98161 4303 aa5.67□□□□□ -1.5
PDS5A-201ENST00000303538 KRTAP9-8Q9BYQ0 159 aa5.65□□□□□ -1.51
PDS5A-201ENST00000303538 LRP1Q07954 4544 aaKnown RBP5.63□□□□□ -1.51
PDS5A-201ENST00000303538 MYCBP2O75592 4640 aa5.61□□□□□ -1.51
PDS5A-201ENST00000303538 TNXBP22105 4242 aa5.59□□□□□ -1.51
PDS5A-201ENST00000303538 KRTAP9-3Q9BYQ3 159 aa5.53□□□□□ -1.52
PDS5A-201ENST00000303538 RYR3Q15413 4870 aa5.52□□□□□ -1.53
PDS5A-201ENST00000303538 LCE3EQ5T5B0 92 aa5.52□□□□□ -1.53
PDS5A-201ENST00000303538 KRTAP9-6A0A140TA67 174 aa5.5□□□□□ -1.53
PDS5A-201ENST00000303538 LCE1BQ5T7P3 118 aa5.5□□□□□ -1.53
PDS5A-201ENST00000303538 KRTAP4-7Q9BYR0 210 aa5.5□□□□□ -1.53
PDS5A-201ENST00000303538 KRTAP19-3Q7Z4W3 81 aa5.47□□□□□ -1.53
PDS5A-201ENST00000303538 LCE1DQ5T752 114 aa5.41□□□□□ -1.54
PDS5A-201ENST00000303538 KRTAP20-1Q3LI63 56 aa5.35□□□□□ -1.55
PDS5A-201ENST00000303538 LOC100996750A0A140TA64 210 aa5.32□□□□□ -1.56
PDS5A-201ENST00000303538 MT1LQ93083 61 aa5.3□□□□□ -1.56
PDS5A-201ENST00000303538 KRTAP19-6Q3LI70 58 aa5.27□□□□□ -1.57
PDS5A-201ENST00000303538 MT1EP04732 61 aa5.25□□□□□ -1.57
PDS5A-201ENST00000303538 KRTAP4-3Q9BYR4 195 aa5.25□□□□□ -1.57
PDS5A-201ENST00000303538 FLGP20930 4061 aaPredicted RBP5.25□□□□□ -1.57
PDS5A-201ENST00000303538 MT3P25713 68 aa5.25□□□□□ -1.57
PDS5A-201ENST00000303538 LCE5AQ5TCM9 118 aa5.23□□□□□ -1.57
PDS5A-201ENST00000303538 HYDINQ4G0P3 5121 aa5.19□□□□□ -1.58
PDS5A-201ENST00000303538 LRP2P98164 4655 aa5.17□□□□□ -1.58
PDS5A-201ENST00000303538 KRTAP9-7A8MTY7 169 aa5.16□□□□□ -1.58
PDS5A-201ENST00000303538 MT1MQ8N339 61 aa5.16□□□□□ -1.58
PDS5A-201ENST00000303538 MUC17Q685J3 4493 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms