RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 AKAP9Q99996 3911 aa5.27□□□□□ -1.57
ABCA3-201ENST00000301732 ZNF469Q96JG9 3925 aaPredicted RBP5.16□□□□□ -1.58
ABCA3-201ENST00000301732 ALMS1Q8TCU4 4167 aa5.11□□□□□ -1.59
ABCA3-201ENST00000301732 KRTAP8-1Q8IUC2 63 aa5.06□□□□□ -1.6
ABCA3-201ENST00000301732 DNAH10Q8IVF4 4471 aa5.05□□□□□ -1.6
ABCA3-201ENST00000301732 KRTAP10-4P60372 401 aaPredicted RBP5.03□□□□□ -1.6
ABCA3-201ENST00000301732 DNAH2Q9P225 4427 aa4.95□□□□□ -1.62
ABCA3-201ENST00000301732 KRTAP4-1Q9BYQ7 146 aa4.93□□□□□ -1.62
ABCA3-201ENST00000301732 DNAH1Q9P2D7 4330 aa4.93□□□□□ -1.62
ABCA3-201ENST00000301732 FRAS1Q86XX4 4008 aa4.88□□□□□ -1.63
ABCA3-201ENST00000301732 DNAH9Q9NYC9 4486 aa4.86□□□□□ -1.63
ABCA3-201ENST00000301732 DNAH5Q8TE73 4624 aa4.86□□□□□ -1.63
ABCA3-201ENST00000301732 DNAH8Q96JB1 4490 aa4.85□□□□□ -1.63
ABCA3-201ENST00000301732 ANK2Q01484 3957 aa4.84□□□□□ -1.63
ABCA3-201ENST00000301732 DNAH11Q96DT5 4516 aa4.84□□□□□ -1.63
ABCA3-201ENST00000301732 FAT1Q14517 4588 aa4.84□□□□□ -1.63
ABCA3-201ENST00000301732 KRTAP19-5Q3LI72 72 aa4.82□□□□□ -1.64
ABCA3-201ENST00000301732 KRTAP23-1A1A580 65 aa4.8□□□□□ -1.64
ABCA3-201ENST00000301732 PLECQ15149 4684 aaKnown RBP4.79□□□□□ -1.64
ABCA3-201ENST00000301732 DNAH3Q8TD57 4116 aa4.78□□□□□ -1.64
ABCA3-201ENST00000301732 SPRR2FQ96RM1 72 aa4.77□□□□□ -1.65
ABCA3-201ENST00000301732 VPS13BQ7Z7G8 4022 aa4.76□□□□□ -1.65
ABCA3-201ENST00000301732 MT1HP80294 61 aa4.75□□□□□ -1.65
ABCA3-201ENST00000301732 LYSTQ99698 3801 aa4.74□□□□□ -1.65
ABCA3-201ENST00000301732 KMT2AQ03164 3969 aa4.71□□□□□ -1.66
ABCA3-201ENST00000301732 MT2AP02795 61 aa4.68□□□□□ -1.66
ABCA3-201ENST00000301732 LCE3BQ5TA77 95 aa4.68□□□□□ -1.66
ABCA3-201ENST00000301732 MT1FP04733 61 aa4.66□□□□□ -1.66
ABCA3-201ENST00000301732 LCE3CQ5T5A8 94 aa4.66□□□□□ -1.66
ABCA3-201ENST00000301732 KRTAP10-7P60409 375 aaPredicted RBP4.64□□□□□ -1.67
ABCA3-201ENST00000301732 DNHD1Q96M86 4753 aa4.64□□□□□ -1.67
ABCA3-201ENST00000301732 DNAH17Q9UFH2 4485 aa4.62□□□□□ -1.67
ABCA3-201ENST00000301732 APOBP04114 4563 aaKnown RBP4.62□□□□□ -1.67
ABCA3-201ENST00000301732 STARD9Q9P2P6 4700 aa4.6□□□□□ -1.67
ABCA3-201ENST00000301732 LRP1BQ9NZR2 4599 aa4.59□□□□□ -1.67
ABCA3-201ENST00000301732 CMYA5Q8N3K9 4069 aa4.59□□□□□ -1.67
ABCA3-201ENST00000301732 RYR1P21817 5038 aa4.57□□□□□ -1.68
ABCA3-201ENST00000301732 MYCBP2O75592 4640 aa4.56□□□□□ -1.68
ABCA3-201ENST00000301732 FAT2Q9NYQ8 4349 aa4.56□□□□□ -1.68
ABCA3-201ENST00000301732 SACSQ9NZJ4 4579 aa4.56□□□□□ -1.68
ABCA3-201ENST00000301732 MT1GP13640 62 aa4.52□□□□□ -1.69
ABCA3-201ENST00000301732 SPRR2GQ9BYE4 73 aa4.52□□□□□ -1.69
ABCA3-201ENST00000301732 VPS13DQ5THJ4 4388 aa4.52□□□□□ -1.69
ABCA3-201ENST00000301732 DNAH7Q8WXX0 4024 aa4.51□□□□□ -1.69
ABCA3-201ENST00000301732 FAT3Q8TDW7 4589 aa4.5□□□□□ -1.69
ABCA3-201ENST00000301732 DYNC1H1Q14204 4646 aaKnown RBP4.49□□□□□ -1.69
ABCA3-201ENST00000301732 KRTAP12-4P60329 112 aa4.48□□□□□ -1.69
ABCA3-201ENST00000301732 PRKDCP78527 4128 aaKnown RBP4.48□□□□□ -1.69
ABCA3-201ENST00000301732 DYNC2H1Q8NCM8 4307 aaKnown RBP4.47□□□□□ -1.69
ABCA3-201ENST00000301732 DNAH6Q9C0G6 4158 aa4.43□□□□□ -1.7
ABCA3-201ENST00000301732 KRTAP4-8A0A0G2JLE6 195 aa4.43□□□□□ -1.7
ABCA3-201ENST00000301732 KRTAP4-8Q9BYQ9 185 aa4.43□□□□□ -1.7
ABCA3-201ENST00000301732 SPRR2EP22531 72 aa4.41□□□□□ -1.7
ABCA3-201ENST00000301732 SPRR2BP35325 72 aa4.41□□□□□ -1.7
ABCA3-201ENST00000301732 SPRR2AP35326 72 aa4.41□□□□□ -1.7
ABCA3-201ENST00000301732 KRTAP4-7Q9BYR0 210 aa4.32□□□□□ -1.72
ABCA3-201ENST00000301732 LPAP08519 4548 aa4.32□□□□□ -1.72
ABCA3-201ENST00000301732 LRP1Q07954 4544 aaKnown RBP4.32□□□□□ -1.72
ABCA3-201ENST00000301732 HECTD4Q9Y4D8 3996 aa4.31□□□□□ -1.72
ABCA3-201ENST00000301732 KRTAP17-1Q9BYP8 105 aa4.29□□□□□ -1.72
ABCA3-201ENST00000301732 KRTAP19-1Q8IUB9 90 aa4.26□□□□□ -1.73
ABCA3-201ENST00000301732 MT1XP80297 61 aa4.26□□□□□ -1.73
ABCA3-201ENST00000301732 SPRR2DP22532 72 aa4.21□□□□□ -1.73
ABCA3-201ENST00000301732 LCE3DQ9BYE3 92 aa4.18□□□□□ -1.74
ABCA3-201ENST00000301732 RYR3Q15413 4870 aa4.17□□□□□ -1.74
ABCA3-201ENST00000301732 LCE2BO14633 110 aa4.15□□□□□ -1.74
ABCA3-201ENST00000301732 MT1BP07438 61 aa4.12□□□□□ -1.75
ABCA3-201ENST00000301732 LRP2P98164 4655 aa4.12□□□□□ -1.75
ABCA3-201ENST00000301732 KIAA1109Q2LD37 5005 aa4.11□□□□□ -1.75
ABCA3-201ENST00000301732 LOC100996750A0A140TA64 210 aa4.1□□□□□ -1.75
ABCA3-201ENST00000301732 PKD1P98161 4303 aa4.06□□□□□ -1.76
ABCA3-201ENST00000301732 LCE3EQ5T5B0 92 aa4.06□□□□□ -1.76
ABCA3-201ENST00000301732 KRTAP19-8Q3LI54 63 aa4.05□□□□□ -1.76
ABCA3-201ENST00000301732 PRM1P04553 51 aa4.04□□□□□ -1.76
ABCA3-201ENST00000301732 PKHD1P08F94 4074 aa4.04□□□□□ -1.76
ABCA3-201ENST00000301732 HERC1Q15751 4861 aa4.03□□□□□ -1.76
ABCA3-201ENST00000301732 KRTAP9-8Q9BYQ0 159 aa4.02□□□□□ -1.77
ABCA3-201ENST00000301732 KRTAP4-3Q9BYR4 195 aa4.01□□□□□ -1.77
ABCA3-201ENST00000301732 KRTAP19-4Q3LI73 84 aa4□□□□□ -1.77
ABCA3-201ENST00000301732 HSPG2P98160 4391 aa4□□□□□ -1.77
ABCA3-201ENST00000301732 MT4P47944 62 aa4□□□□□ -1.77
ABCA3-201ENST00000301732 FSIP2Q5CZC0 6907 aa3.97□□□□□ -1.77
ABCA3-201ENST00000301732 SPRR5A0A1B0GTR4 108 aa3.94□□□□□ -1.78
ABCA3-201ENST00000301732 KRTAP4-9Q9BYQ8 210 aa3.94□□□□□ -1.78
ABCA3-201ENST00000301732 LCE1BQ5T7P3 118 aa3.94□□□□□ -1.78
ABCA3-201ENST00000301732 RYR2Q92736 4967 aa3.93□□□□□ -1.78
ABCA3-201ENST00000301732 SYNE1Q8NF91 8797 aaKnown RBP3.92□□□□□ -1.78
ABCA3-201ENST00000301732 LCE2CQ5TA81 110 aa3.91□□□□□ -1.78
ABCA3-201ENST00000301732 SYNE2Q8WXH0 6885 aaKnown RBP3.91□□□□□ -1.78
ABCA3-201ENST00000301732 TNXBP22105 4242 aa3.9□□□□□ -1.78
ABCA3-201ENST00000301732 PKHD1L1Q86WI1 4243 aa3.9□□□□□ -1.78
ABCA3-201ENST00000301732 KRTAP9-3Q9BYQ3 159 aa3.9□□□□□ -1.78
ABCA3-201ENST00000301732 HYDINQ4G0P3 5121 aa3.9□□□□□ -1.79
ABCA3-201ENST00000301732 LCE2DQ5TA82 110 aaPredicted RBP3.9□□□□□ -1.79
ABCA3-201ENST00000301732 HERC2O95714 4834 aa3.88□□□□□ -1.79
ABCA3-201ENST00000301732 MT1LQ93083 61 aa3.87□□□□□ -1.79
ABCA3-201ENST00000301732 LCE1DQ5T752 114 aa3.86□□□□□ -1.79
ABCA3-201ENST00000301732 BIRC6Q9NR09 4857 aa3.85□□□□□ -1.79
ABCA3-201ENST00000301732 KRTAP19-3Q7Z4W3 81 aa3.85□□□□□ -1.79
ABCA3-201ENST00000301732 PCLOQ9Y6V0 5065 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms