RNA–Protein interactions for RNA: ENST00000299954.13

PITPNC1-201, Transcript of phosphatidylinositol transfer protein cytoplasmic 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PITPNC1, Length 6,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNC1-201ENST00000299954 OTOGQ6ZRI0 2925 aa7.59□□□□□ -1.19
PITPNC1-201ENST00000299954 VPS13CQ709C8 3753 aa7.55□□□□□ -1.2
PITPNC1-201ENST00000299954 CSMD3Q7Z407 3707 aa7.45□□□□□ -1.22
PITPNC1-201ENST00000299954 ALMS1Q8TCU4 4167 aa7.44□□□□□ -1.22
PITPNC1-201ENST00000299954 ZNF469Q96JG9 3925 aaPredicted RBP7.26□□□□□ -1.25
PITPNC1-201ENST00000299954 KRTAP4-1Q9BYQ7 146 aa7.25□□□□□ -1.25
PITPNC1-201ENST00000299954 AKAP9Q99996 3911 aa7.19□□□□□ -1.26
PITPNC1-201ENST00000299954 MT1HP80294 61 aa7.17□□□□□ -1.26
PITPNC1-201ENST00000299954 KRTAP19-5Q3LI72 72 aa7.11□□□□□ -1.27
PITPNC1-201ENST00000299954 SPRR2FQ96RM1 72 aa7.07□□□□□ -1.28
PITPNC1-201ENST00000299954 MT2AP02795 61 aa7.06□□□□□ -1.28
PITPNC1-201ENST00000299954 DNAH1Q9P2D7 4330 aa7.06□□□□□ -1.28
PITPNC1-201ENST00000299954 DNAH5Q8TE73 4624 aa7.05□□□□□ -1.28
PITPNC1-201ENST00000299954 DNAH10Q8IVF4 4471 aa7.04□□□□□ -1.28
PITPNC1-201ENST00000299954 DNAH9Q9NYC9 4486 aa7.04□□□□□ -1.28
PITPNC1-201ENST00000299954 KRTAP10-7P60409 375 aaPredicted RBP7.03□□□□□ -1.28
PITPNC1-201ENST00000299954 DNAH2Q9P225 4427 aa6.99□□□□□ -1.29
PITPNC1-201ENST00000299954 LCE3CQ5T5A8 94 aa6.97□□□□□ -1.29
PITPNC1-201ENST00000299954 MT1FP04733 61 aa6.95□□□□□ -1.3
PITPNC1-201ENST00000299954 SPRR2GQ9BYE4 73 aa6.94□□□□□ -1.3
PITPNC1-201ENST00000299954 DNAH11Q96DT5 4516 aa6.88□□□□□ -1.31
PITPNC1-201ENST00000299954 DNAH8Q96JB1 4490 aa6.85□□□□□ -1.31
PITPNC1-201ENST00000299954 PLECQ15149 4684 aaKnown RBP6.84□□□□□ -1.31
PITPNC1-201ENST00000299954 FAT1Q14517 4588 aa6.82□□□□□ -1.32
PITPNC1-201ENST00000299954 LCE3BQ5TA77 95 aa6.75□□□□□ -1.33
PITPNC1-201ENST00000299954 DNAH17Q9UFH2 4485 aa6.71□□□□□ -1.34
PITPNC1-201ENST00000299954 SPRR2EP22531 72 aa6.63□□□□□ -1.35
PITPNC1-201ENST00000299954 SPRR2BP35325 72 aa6.63□□□□□ -1.35
PITPNC1-201ENST00000299954 SPRR2AP35326 72 aa6.63□□□□□ -1.35
PITPNC1-201ENST00000299954 DNAH3Q8TD57 4116 aa6.63□□□□□ -1.35
PITPNC1-201ENST00000299954 ANK2Q01484 3957 aa6.61□□□□□ -1.35
PITPNC1-201ENST00000299954 LRP1BQ9NZR2 4599 aa6.6□□□□□ -1.35
PITPNC1-201ENST00000299954 FAT2Q9NYQ8 4349 aa6.6□□□□□ -1.35
PITPNC1-201ENST00000299954 VPS13DQ5THJ4 4388 aa6.6□□□□□ -1.35
PITPNC1-201ENST00000299954 MT1GP13640 62 aa6.58□□□□□ -1.36
PITPNC1-201ENST00000299954 DYNC1H1Q14204 4646 aaKnown RBP6.56□□□□□ -1.36
PITPNC1-201ENST00000299954 CMYA5Q8N3K9 4069 aa6.56□□□□□ -1.36
PITPNC1-201ENST00000299954 SACSQ9NZJ4 4579 aa6.53□□□□□ -1.36
PITPNC1-201ENST00000299954 KRTAP12-4P60329 112 aa6.52□□□□□ -1.37
PITPNC1-201ENST00000299954 DNHD1Q96M86 4753 aa6.52□□□□□ -1.37
PITPNC1-201ENST00000299954 VPS13BQ7Z7G8 4022 aa6.47□□□□□ -1.37
PITPNC1-201ENST00000299954 DYNC2H1Q8NCM8 4307 aaKnown RBP6.47□□□□□ -1.37
PITPNC1-201ENST00000299954 STARD9Q9P2P6 4700 aa6.46□□□□□ -1.37
PITPNC1-201ENST00000299954 APOBP04114 4563 aaKnown RBP6.42□□□□□ -1.38
PITPNC1-201ENST00000299954 RYR1P21817 5038 aa6.41□□□□□ -1.38
PITPNC1-201ENST00000299954 SPRR2DP22532 72 aa6.39□□□□□ -1.39
PITPNC1-201ENST00000299954 FRAS1Q86XX4 4008 aa6.38□□□□□ -1.39
PITPNC1-201ENST00000299954 KRTAP19-1Q8IUB9 90 aa6.38□□□□□ -1.39
PITPNC1-201ENST00000299954 MT1XP80297 61 aa6.37□□□□□ -1.39
PITPNC1-201ENST00000299954 KRTAP4-8A0A0G2JLE6 195 aa6.35□□□□□ -1.39
PITPNC1-201ENST00000299954 KRTAP4-8Q9BYQ9 185 aa6.35□□□□□ -1.39
PITPNC1-201ENST00000299954 KMT2AQ03164 3969 aa6.34□□□□□ -1.4
PITPNC1-201ENST00000299954 PRKDCP78527 4128 aaKnown RBP6.32□□□□□ -1.4
PITPNC1-201ENST00000299954 KRTAP19-8Q3LI54 63 aa6.31□□□□□ -1.4
PITPNC1-201ENST00000299954 LCE2BO14633 110 aa6.3□□□□□ -1.4
PITPNC1-201ENST00000299954 LYSTQ99698 3801 aa6.29□□□□□ -1.4
PITPNC1-201ENST00000299954 KRTAP19-4Q3LI73 84 aa6.29□□□□□ -1.4
PITPNC1-201ENST00000299954 DNAH7Q8WXX0 4024 aa6.24□□□□□ -1.41
PITPNC1-201ENST00000299954 LCE3DQ9BYE3 92 aa6.23□□□□□ -1.41
PITPNC1-201ENST00000299954 MT1BP07438 61 aa6.21□□□□□ -1.42
PITPNC1-201ENST00000299954 DNAH6Q9C0G6 4158 aa6.2□□□□□ -1.42
PITPNC1-201ENST00000299954 KRTAP17-1Q9BYP8 105 aa6.17□□□□□ -1.42
PITPNC1-201ENST00000299954 FAT3Q8TDW7 4589 aa6.15□□□□□ -1.42
PITPNC1-201ENST00000299954 LRP1Q07954 4544 aaKnown RBP6.12□□□□□ -1.43
PITPNC1-201ENST00000299954 KRTAP4-7Q9BYR0 210 aa6.1□□□□□ -1.43
PITPNC1-201ENST00000299954 LCE3EQ5T5B0 92 aa6.09□□□□□ -1.43
PITPNC1-201ENST00000299954 MYCBP2O75592 4640 aa6.09□□□□□ -1.43
PITPNC1-201ENST00000299954 RYR3Q15413 4870 aa6.07□□□□□ -1.44
PITPNC1-201ENST00000299954 KRTAP9-8Q9BYQ0 159 aa6.07□□□□□ -1.44
PITPNC1-201ENST00000299954 SPRR5A0A1B0GTR4 108 aa6□□□□□ -1.45
PITPNC1-201ENST00000299954 HECTD4Q9Y4D8 3996 aa5.98□□□□□ -1.45
PITPNC1-201ENST00000299954 KRTAP9-3Q9BYQ3 159 aa5.94□□□□□ -1.46
PITPNC1-201ENST00000299954 LCE2CQ5TA81 110 aa5.91□□□□□ -1.46
PITPNC1-201ENST00000299954 HYDINQ4G0P3 5121 aa5.89□□□□□ -1.47
PITPNC1-201ENST00000299954 KRTAP19-3Q7Z4W3 81 aa5.87□□□□□ -1.47
PITPNC1-201ENST00000299954 LCE2DQ5TA82 110 aaPredicted RBP5.86□□□□□ -1.47
PITPNC1-201ENST00000299954 PRM1P04553 51 aa5.83□□□□□ -1.48
PITPNC1-201ENST00000299954 MT1LQ93083 61 aa5.82□□□□□ -1.48
PITPNC1-201ENST00000299954 MT4P47944 62 aa5.81□□□□□ -1.48
PITPNC1-201ENST00000299954 LPAP08519 4548 aa5.8□□□□□ -1.48
PITPNC1-201ENST00000299954 LOC100996750A0A140TA64 210 aa5.8□□□□□ -1.48
PITPNC1-201ENST00000299954 PKD1P98161 4303 aa5.75□□□□□ -1.49
PITPNC1-201ENST00000299954 MT1EP04732 61 aa5.74□□□□□ -1.49
PITPNC1-201ENST00000299954 HERC1Q15751 4861 aa5.71□□□□□ -1.5
PITPNC1-201ENST00000299954 LCE1BQ5T7P3 118 aa5.7□□□□□ -1.5
PITPNC1-201ENST00000299954 PKHD1P08F94 4074 aa5.7□□□□□ -1.5
PITPNC1-201ENST00000299954 KIAA1109Q2LD37 5005 aa5.69□□□□□ -1.5
PITPNC1-201ENST00000299954 RYR2Q92736 4967 aa5.69□□□□□ -1.5
PITPNC1-201ENST00000299954 KRTAP4-3Q9BYR4 195 aa5.68□□□□□ -1.5
PITPNC1-201ENST00000299954 HSPG2P98160 4391 aa5.66□□□□□ -1.5
PITPNC1-201ENST00000299954 PKHD1L1Q86WI1 4243 aa5.64□□□□□ -1.51
PITPNC1-201ENST00000299954 LCE1DQ5T752 114 aa5.62□□□□□ -1.51
PITPNC1-201ENST00000299954 KRTAP9-2Q9BYQ4 174 aa5.62□□□□□ -1.51
PITPNC1-201ENST00000299954 MT3P25713 68 aa5.61□□□□□ -1.51
PITPNC1-201ENST00000299954 MT1MQ8N339 61 aa5.61□□□□□ -1.51
PITPNC1-201ENST00000299954 BIRC6Q9NR09 4857 aa5.6□□□□□ -1.51
PITPNC1-201ENST00000299954 LRP2P98164 4655 aa5.58□□□□□ -1.52
PITPNC1-201ENST00000299954 HERC2O95714 4834 aa5.56□□□□□ -1.52
PITPNC1-201ENST00000299954 PCLOQ9Y6V0 5065 aa5.55□□□□□ -1.52
PITPNC1-201ENST00000299954 KRTAP4-9Q9BYQ8 210 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms