RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 DNAH1Q9P2D7 4330 aa6.98□□□□□ -1.29
ARHGEF28-201ENST00000296794 KRTAP10-12P60413 245 aa6.98□□□□□ -1.29
ARHGEF28-201ENST00000296794 PLECQ15149 4684 aaKnown RBP6.96□□□□□ -1.3
ARHGEF28-201ENST00000296794 DNHD1Q96M86 4753 aa6.91□□□□□ -1.3
ARHGEF28-201ENST00000296794 DNAH11Q96DT5 4516 aa6.9□□□□□ -1.3
ARHGEF28-201ENST00000296794 INE1O15225 51 aa6.9□□□□□ -1.3
ARHGEF28-201ENST00000296794 DNAH10Q8IVF4 4471 aa6.88□□□□□ -1.31
ARHGEF28-201ENST00000296794 KRTAP23-1A1A580 65 aa6.87□□□□□ -1.31
ARHGEF28-201ENST00000296794 LCE3AQ5TA76 89 aa6.83□□□□□ -1.32
ARHGEF28-201ENST00000296794 KRTAP12-3P60328 96 aa6.82□□□□□ -1.32
ARHGEF28-201ENST00000296794 DNAH17Q9UFH2 4485 aa6.82□□□□□ -1.32
ARHGEF28-201ENST00000296794 VPS13DQ5THJ4 4388 aa6.79□□□□□ -1.32
ARHGEF28-201ENST00000296794 CRCT1Q9UGL9 99 aa6.76□□□□□ -1.33
ARHGEF28-201ENST00000296794 DNAH2Q9P225 4427 aa6.7□□□□□ -1.34
ARHGEF28-201ENST00000296794 KRTAP4-1Q9BYQ7 146 aa6.65□□□□□ -1.34
ARHGEF28-201ENST00000296794 DYNC1H1Q14204 4646 aaKnown RBP6.65□□□□□ -1.35
ARHGEF28-201ENST00000296794 STARD9Q9P2P6 4700 aa6.65□□□□□ -1.35
ARHGEF28-201ENST00000296794 DNAH8Q96JB1 4490 aa6.63□□□□□ -1.35
ARHGEF28-201ENST00000296794 FAT1Q14517 4588 aa6.61□□□□□ -1.35
ARHGEF28-201ENST00000296794 LRP1BQ9NZR2 4599 aa6.61□□□□□ -1.35
ARHGEF28-201ENST00000296794 KRTAP8-1Q8IUC2 63 aa6.6□□□□□ -1.35
ARHGEF28-201ENST00000296794 DNAH3Q8TD57 4116 aa6.59□□□□□ -1.35
ARHGEF28-201ENST00000296794 RYR1P21817 5038 aa6.58□□□□□ -1.36
ARHGEF28-201ENST00000296794 MT1HP80294 61 aa6.57□□□□□ -1.36
ARHGEF28-201ENST00000296794 SACSQ9NZJ4 4579 aa6.54□□□□□ -1.36
ARHGEF28-201ENST00000296794 ANK2Q01484 3957 aa6.49□□□□□ -1.37
ARHGEF28-201ENST00000296794 DYNC2H1Q8NCM8 4307 aaKnown RBP6.48□□□□□ -1.37
ARHGEF28-201ENST00000296794 MT2AP02795 61 aa6.47□□□□□ -1.37
ARHGEF28-201ENST00000296794 FAT2Q9NYQ8 4349 aa6.42□□□□□ -1.38
ARHGEF28-201ENST00000296794 SPRR2GQ9BYE4 73 aa6.38□□□□□ -1.39
ARHGEF28-201ENST00000296794 KMT2AQ03164 3969 aa6.38□□□□□ -1.39
ARHGEF28-201ENST00000296794 PRKDCP78527 4128 aaKnown RBP6.38□□□□□ -1.39
ARHGEF28-201ENST00000296794 APOBP04114 4563 aaKnown RBP6.37□□□□□ -1.39
ARHGEF28-201ENST00000296794 VPS13BQ7Z7G8 4022 aa6.35□□□□□ -1.39
ARHGEF28-201ENST00000296794 KIAA1109Q2LD37 5005 aa6.31□□□□□ -1.4
ARHGEF28-201ENST00000296794 MT1FP04733 61 aa6.31□□□□□ -1.4
ARHGEF28-201ENST00000296794 LYSTQ99698 3801 aa6.27□□□□□ -1.41
ARHGEF28-201ENST00000296794 MYCBP2O75592 4640 aa6.26□□□□□ -1.41
ARHGEF28-201ENST00000296794 FRAS1Q86XX4 4008 aa6.24□□□□□ -1.41
ARHGEF28-201ENST00000296794 KRTAP10-5P60370 271 aa6.22□□□□□ -1.41
ARHGEF28-201ENST00000296794 RYR3Q15413 4870 aa6.19□□□□□ -1.42
ARHGEF28-201ENST00000296794 SPRR2FQ96RM1 72 aa6.18□□□□□ -1.42
ARHGEF28-201ENST00000296794 HECTD4Q9Y4D8 3996 aa6.14□□□□□ -1.43
ARHGEF28-201ENST00000296794 CMYA5Q8N3K9 4069 aa6.12□□□□□ -1.43
ARHGEF28-201ENST00000296794 KRTAP17-1Q9BYP8 105 aa6.12□□□□□ -1.43
ARHGEF28-201ENST00000296794 DNAH6Q9C0G6 4158 aa6.11□□□□□ -1.43
ARHGEF28-201ENST00000296794 KRTAP19-5Q3LI72 72 aa6.1□□□□□ -1.43
ARHGEF28-201ENST00000296794 LRP1Q07954 4544 aaKnown RBP6.08□□□□□ -1.44
ARHGEF28-201ENST00000296794 KRTAP10-7P60409 375 aaPredicted RBP6.07□□□□□ -1.44
ARHGEF28-201ENST00000296794 DNAH7Q8WXX0 4024 aa6.05□□□□□ -1.44
ARHGEF28-201ENST00000296794 FAT3Q8TDW7 4589 aa6.04□□□□□ -1.44
ARHGEF28-201ENST00000296794 LCE3CQ5T5A8 94 aa6.03□□□□□ -1.44
ARHGEF28-201ENST00000296794 KRTAP19-1Q8IUB9 90 aa6.02□□□□□ -1.45
ARHGEF28-201ENST00000296794 RYR2Q92736 4967 aa5.98□□□□□ -1.45
ARHGEF28-201ENST00000296794 HERC2O95714 4834 aa5.98□□□□□ -1.45
ARHGEF28-201ENST00000296794 KRTAP19-8Q3LI54 63 aa5.95□□□□□ -1.46
ARHGEF28-201ENST00000296794 KRTAP19-4Q3LI73 84 aa5.92□□□□□ -1.46
ARHGEF28-201ENST00000296794 BIRC6Q9NR09 4857 aa5.91□□□□□ -1.46
ARHGEF28-201ENST00000296794 PCLOQ9Y6V0 5065 aa5.85□□□□□ -1.47
ARHGEF28-201ENST00000296794 MT1XP80297 61 aa5.84□□□□□ -1.48
ARHGEF28-201ENST00000296794 HYDINQ4G0P3 5121 aa5.83□□□□□ -1.48
ARHGEF28-201ENST00000296794 LRP2P98164 4655 aa5.81□□□□□ -1.48
ARHGEF28-201ENST00000296794 SPRR5A0A1B0GTR4 108 aa5.8□□□□□ -1.48
ARHGEF28-201ENST00000296794 SPRR2EP22531 72 aa5.8□□□□□ -1.48
ARHGEF28-201ENST00000296794 SPRR2BP35325 72 aa5.8□□□□□ -1.48
ARHGEF28-201ENST00000296794 SPRR2AP35326 72 aa5.8□□□□□ -1.48
ARHGEF28-201ENST00000296794 KRTAP9-8Q9BYQ0 159 aa5.78□□□□□ -1.48
ARHGEF28-201ENST00000296794 MT1BP07438 61 aa5.77□□□□□ -1.49
ARHGEF28-201ENST00000296794 PKHD1P08F94 4074 aa5.72□□□□□ -1.49
ARHGEF28-201ENST00000296794 HSPG2P98160 4391 aa5.71□□□□□ -1.5
ARHGEF28-201ENST00000296794 LCE2CQ5TA81 110 aa5.7□□□□□ -1.5
ARHGEF28-201ENST00000296794 HERC1Q15751 4861 aa5.69□□□□□ -1.5
ARHGEF28-201ENST00000296794 EPPK1P58107 5090 aaKnown RBP5.67□□□□□ -1.5
ARHGEF28-201ENST00000296794 KRTAP9-3Q9BYQ3 159 aa5.66□□□□□ -1.5
ARHGEF28-201ENST00000296794 PKD1P98161 4303 aa5.65□□□□□ -1.5
ARHGEF28-201ENST00000296794 SPRR2DP22532 72 aa5.61□□□□□ -1.51
ARHGEF28-201ENST00000296794 LCE2BO14633 110 aa5.59□□□□□ -1.51
ARHGEF28-201ENST00000296794 LPAP08519 4548 aa5.59□□□□□ -1.51
ARHGEF28-201ENST00000296794 KMT2CQ8NEZ4 4911 aaKnown RBP5.58□□□□□ -1.52
ARHGEF28-201ENST00000296794 KRTAP4-8A0A0G2JLE6 195 aa5.57□□□□□ -1.52
ARHGEF28-201ENST00000296794 KRTAP4-8Q9BYQ9 185 aa5.57□□□□□ -1.52
ARHGEF28-201ENST00000296794 MT1GP13640 62 aa5.54□□□□□ -1.52
ARHGEF28-201ENST00000296794 PKHD1L1Q86WI1 4243 aa5.51□□□□□ -1.53
ARHGEF28-201ENST00000296794 KRTAP19-2Q3LHN2 52 aa5.51□□□□□ -1.53
ARHGEF28-201ENST00000296794 KRTAP12-4P60329 112 aa5.49□□□□□ -1.53
ARHGEF28-201ENST00000296794 LCE3BQ5TA77 95 aa5.49□□□□□ -1.53
ARHGEF28-201ENST00000296794 TNXBP22105 4242 aa5.48□□□□□ -1.53
ARHGEF28-201ENST00000296794 MUC17Q685J3 4493 aa5.42□□□□□ -1.54
ARHGEF28-201ENST00000296794 ABCA13Q86UQ4 5058 aa5.39□□□□□ -1.55
ARHGEF28-201ENST00000296794 SYNE1Q8NF91 8797 aaKnown RBP5.37□□□□□ -1.55
ARHGEF28-201ENST00000296794 FLGP20930 4061 aaPredicted RBP5.34□□□□□ -1.55
ARHGEF28-201ENST00000296794 UBR4Q5T4S7 5183 aa5.33□□□□□ -1.56
ARHGEF28-201ENST00000296794 KRTAP4-7Q9BYR0 210 aa5.33□□□□□ -1.56
ARHGEF28-201ENST00000296794 KRTAP19-3Q7Z4W3 81 aa5.32□□□□□ -1.56
ARHGEF28-201ENST00000296794 KRTAP9-2Q9BYQ4 174 aa5.29□□□□□ -1.56
ARHGEF28-201ENST00000296794 MT1LQ93083 61 aa5.27□□□□□ -1.57
ARHGEF28-201ENST00000296794 KRTAP19-6Q3LI70 58 aa5.22□□□□□ -1.57
ARHGEF28-201ENST00000296794 MT1EP04732 61 aa5.21□□□□□ -1.58
ARHGEF28-201ENST00000296794 FSIP2Q5CZC0 6907 aa5.21□□□□□ -1.58
ARHGEF28-201ENST00000296794 LCE3DQ9BYE3 92 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms