RNA–Protein interactions for RNA: ENST00000286307.5

LSM11-201, Transcript of LSM11, U7 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM11, Length 6,584 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11-201ENST00000286307 DNAH1Q9P2D7 4330 aa8.37□□□□□ -1.07
LSM11-201ENST00000286307 KRTAP3-2Q9BYR7 98 aa8.34□□□□□ -1.07
LSM11-201ENST00000286307 KRTAP8-1Q8IUC2 63 aa8.31□□□□□ -1.08
LSM11-201ENST00000286307 DNAH5Q8TE73 4624 aa8.24□□□□□ -1.09
LSM11-201ENST00000286307 KRTAP12-3P60328 96 aa8.23□□□□□ -1.09
LSM11-201ENST00000286307 MT1HP80294 61 aa8.19□□□□□ -1.1
LSM11-201ENST00000286307 LCE3AQ5TA76 89 aa8.18□□□□□ -1.1
LSM11-201ENST00000286307 KRTAP4-1Q9BYQ7 146 aa8.16□□□□□ -1.1
LSM11-201ENST00000286307 PLECQ15149 4684 aaKnown RBP8.08□□□□□ -1.12
LSM11-201ENST00000286307 DNAH11Q96DT5 4516 aa8.06□□□□□ -1.12
LSM11-201ENST00000286307 DNHD1Q96M86 4753 aa8.02□□□□□ -1.13
LSM11-201ENST00000286307 DNAH10Q8IVF4 4471 aa7.98□□□□□ -1.13
LSM11-201ENST00000286307 FAT2Q9NYQ8 4349 aa7.97□□□□□ -1.13
LSM11-201ENST00000286307 VPS13DQ5THJ4 4388 aa7.95□□□□□ -1.14
LSM11-201ENST00000286307 MT2AP02795 61 aa7.92□□□□□ -1.14
LSM11-201ENST00000286307 LRP1BQ9NZR2 4599 aa7.88□□□□□ -1.15
LSM11-201ENST00000286307 DNAH3Q8TD57 4116 aa7.86□□□□□ -1.15
LSM11-201ENST00000286307 DNAH2Q9P225 4427 aa7.86□□□□□ -1.15
LSM11-201ENST00000286307 DNAH17Q9UFH2 4485 aa7.85□□□□□ -1.15
LSM11-201ENST00000286307 SPRR2FQ96RM1 72 aa7.84□□□□□ -1.15
LSM11-201ENST00000286307 STARD9Q9P2P6 4700 aa7.81□□□□□ -1.16
LSM11-201ENST00000286307 PRKDCP78527 4128 aaKnown RBP7.81□□□□□ -1.16
LSM11-201ENST00000286307 DYNC1H1Q14204 4646 aaKnown RBP7.81□□□□□ -1.16
LSM11-201ENST00000286307 DYNC2H1Q8NCM8 4307 aaKnown RBP7.78□□□□□ -1.16
LSM11-201ENST00000286307 MT1FP04733 61 aa7.77□□□□□ -1.17
LSM11-201ENST00000286307 ANK2Q01484 3957 aa7.76□□□□□ -1.17
LSM11-201ENST00000286307 KRTAP10-5P60370 271 aa7.75□□□□□ -1.17
LSM11-201ENST00000286307 KRTAP23-1A1A580 65 aa7.75□□□□□ -1.17
LSM11-201ENST00000286307 KMT2AQ03164 3969 aa7.72□□□□□ -1.17
LSM11-201ENST00000286307 FAT1Q14517 4588 aa7.69□□□□□ -1.18
LSM11-201ENST00000286307 VPS13BQ7Z7G8 4022 aa7.65□□□□□ -1.19
LSM11-201ENST00000286307 SPRR2GQ9BYE4 73 aa7.63□□□□□ -1.19
LSM11-201ENST00000286307 RYR1P21817 5038 aa7.63□□□□□ -1.19
LSM11-201ENST00000286307 SACSQ9NZJ4 4579 aa7.62□□□□□ -1.19
LSM11-201ENST00000286307 KRTAP10-7P60409 375 aaPredicted RBP7.6□□□□□ -1.19
LSM11-201ENST00000286307 CMYA5Q8N3K9 4069 aa7.57□□□□□ -1.2
LSM11-201ENST00000286307 INE1O15225 51 aa7.56□□□□□ -1.2
LSM11-201ENST00000286307 KRTAP17-1Q9BYP8 105 aa7.54□□□□□ -1.2
LSM11-201ENST00000286307 DNAH7Q8WXX0 4024 aa7.5□□□□□ -1.21
LSM11-201ENST00000286307 DNAH6Q9C0G6 4158 aa7.5□□□□□ -1.21
LSM11-201ENST00000286307 SPRR2EP22531 72 aa7.49□□□□□ -1.21
LSM11-201ENST00000286307 SPRR2BP35325 72 aa7.49□□□□□ -1.21
LSM11-201ENST00000286307 SPRR2AP35326 72 aa7.49□□□□□ -1.21
LSM11-201ENST00000286307 KRTAP19-5Q3LI72 72 aa7.46□□□□□ -1.21
LSM11-201ENST00000286307 LYSTQ99698 3801 aa7.45□□□□□ -1.22
LSM11-201ENST00000286307 DNAH8Q96JB1 4490 aa7.43□□□□□ -1.22
LSM11-201ENST00000286307 APOBP04114 4563 aaKnown RBP7.34□□□□□ -1.23
LSM11-201ENST00000286307 RYR3Q15413 4870 aa7.34□□□□□ -1.24
LSM11-201ENST00000286307 FRAS1Q86XX4 4008 aa7.3□□□□□ -1.24
LSM11-201ENST00000286307 FAT3Q8TDW7 4589 aa7.29□□□□□ -1.24
LSM11-201ENST00000286307 SPRR2DP22532 72 aa7.24□□□□□ -1.25
LSM11-201ENST00000286307 LCE3CQ5T5A8 94 aa7.15□□□□□ -1.27
LSM11-201ENST00000286307 HSPG2P98160 4391 aa7.12□□□□□ -1.27
LSM11-201ENST00000286307 LCE2BO14633 110 aa7.1□□□□□ -1.27
LSM11-201ENST00000286307 KRTAP19-1Q8IUB9 90 aa7.1□□□□□ -1.27
LSM11-201ENST00000286307 KRTAP19-8Q3LI54 63 aa7.08□□□□□ -1.28
LSM11-201ENST00000286307 PKHD1L1Q86WI1 4243 aa7.06□□□□□ -1.28
LSM11-201ENST00000286307 HECTD4Q9Y4D8 3996 aa7.05□□□□□ -1.28
LSM11-201ENST00000286307 KRTAP9-8Q9BYQ0 159 aa7.03□□□□□ -1.28
LSM11-201ENST00000286307 LRP1Q07954 4544 aaKnown RBP7.02□□□□□ -1.29
LSM11-201ENST00000286307 MYCBP2O75592 4640 aa6.96□□□□□ -1.3
LSM11-201ENST00000286307 MT1XP80297 61 aa6.95□□□□□ -1.3
LSM11-201ENST00000286307 KIAA1109Q2LD37 5005 aa6.93□□□□□ -1.3
LSM11-201ENST00000286307 RYR2Q92736 4967 aa6.92□□□□□ -1.3
LSM11-201ENST00000286307 MT1BP07438 61 aa6.92□□□□□ -1.3
LSM11-201ENST00000286307 BIRC6Q9NR09 4857 aa6.91□□□□□ -1.3
LSM11-201ENST00000286307 KRTAP9-3Q9BYQ3 159 aa6.89□□□□□ -1.31
LSM11-201ENST00000286307 LCE2CQ5TA81 110 aa6.88□□□□□ -1.31
LSM11-201ENST00000286307 KRTAP4-8A0A0G2JLE6 195 aa6.87□□□□□ -1.31
LSM11-201ENST00000286307 KRTAP4-8Q9BYQ9 185 aa6.87□□□□□ -1.31
LSM11-201ENST00000286307 MT1GP13640 62 aa6.87□□□□□ -1.31
LSM11-201ENST00000286307 LCE3BQ5TA77 95 aa6.86□□□□□ -1.31
LSM11-201ENST00000286307 KRTAP12-4P60329 112 aa6.83□□□□□ -1.32
LSM11-201ENST00000286307 KRTAP9-2Q9BYQ4 174 aa6.83□□□□□ -1.32
LSM11-201ENST00000286307 LPAP08519 4548 aa6.82□□□□□ -1.32
LSM11-201ENST00000286307 HERC2O95714 4834 aa6.82□□□□□ -1.32
LSM11-201ENST00000286307 PKD1P98161 4303 aa6.81□□□□□ -1.32
LSM11-201ENST00000286307 KRTAP19-4Q3LI73 84 aa6.8□□□□□ -1.32
LSM11-201ENST00000286307 PKHD1P08F94 4074 aa6.78□□□□□ -1.32
LSM11-201ENST00000286307 HYDINQ4G0P3 5121 aa6.78□□□□□ -1.32
LSM11-201ENST00000286307 HERC1Q15751 4861 aa6.73□□□□□ -1.33
LSM11-201ENST00000286307 LCE2DQ5TA82 110 aaPredicted RBP6.6□□□□□ -1.35
LSM11-201ENST00000286307 LRP2P98164 4655 aa6.58□□□□□ -1.36
LSM11-201ENST00000286307 TNXBP22105 4242 aa6.56□□□□□ -1.36
LSM11-201ENST00000286307 PCLOQ9Y6V0 5065 aa6.56□□□□□ -1.36
LSM11-201ENST00000286307 KRTAP9-6A0A140TA67 174 aa6.55□□□□□ -1.36
LSM11-201ENST00000286307 KRTAP19-3Q7Z4W3 81 aa6.49□□□□□ -1.37
LSM11-201ENST00000286307 MT4P47944 62 aa6.48□□□□□ -1.37
LSM11-201ENST00000286307 KRTAP19-2Q3LHN2 52 aa6.42□□□□□ -1.38
LSM11-201ENST00000286307 SPRR5A0A1B0GTR4 108 aa6.42□□□□□ -1.38
LSM11-201ENST00000286307 KRTAP19-6Q3LI70 58 aa6.36□□□□□ -1.39
LSM11-201ENST00000286307 KRTAP4-7Q9BYR0 210 aa6.33□□□□□ -1.4
LSM11-201ENST00000286307 MUC17Q685J3 4493 aa6.32□□□□□ -1.4
LSM11-201ENST00000286307 MT1EP04732 61 aa6.29□□□□□ -1.4
LSM11-201ENST00000286307 MT1LQ93083 61 aa6.29□□□□□ -1.4
LSM11-201ENST00000286307 KMT2CQ8NEZ4 4911 aaKnown RBP6.26□□□□□ -1.41
LSM11-201ENST00000286307 FLGP20930 4061 aaPredicted RBP6.25□□□□□ -1.41
LSM11-201ENST00000286307 LCE3DQ9BYE3 92 aa6.25□□□□□ -1.41
LSM11-201ENST00000286307 LCE2AQ5TA79 106 aaPredicted RBP6.2□□□□□ -1.42
LSM11-201ENST00000286307 KRTAP20-1Q3LI63 56 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms