RNA–Protein interactions for RNA: ENST00000278616.8

ATM-201, Transcript of ATM serine/threonine kinase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ATM, Length 13,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-201ENST00000278616 MT1HL1P0DM35 61 aa3.12□□□□□ -1.91
ATM-201ENST00000278616 KRTAP8-1Q8IUC2 63 aa3.08□□□□□ -1.92
ATM-201ENST00000278616 ANK3Q12955 4377 aaKnown RBP3.02□□□□□ -1.93
ATM-201ENST00000278616 HUWE1Q7Z6Z7 4374 aaKnown RBP3□□□□□ -1.93
ATM-201ENST00000278616 ALMS1Q8TCU4 4167 aa3□□□□□ -1.93
ATM-201ENST00000278616 LYSTQ99698 3801 aa2.99□□□□□ -1.93
ATM-201ENST00000278616 KRTAP10-4P60372 401 aaPredicted RBP2.96□□□□□ -1.94
ATM-201ENST00000278616 FRAS1Q86XX4 4008 aa2.96□□□□□ -1.94
ATM-201ENST00000278616 KRTAP10-7P60409 375 aaPredicted RBP2.94□□□□□ -1.94
ATM-201ENST00000278616 KRTAP4-1Q9BYQ7 146 aa2.9□□□□□ -1.94
ATM-201ENST00000278616 LCE3CQ5T5A8 94 aa2.9□□□□□ -1.95
ATM-201ENST00000278616 KMT2AQ03164 3969 aa2.87□□□□□ -1.95
ATM-201ENST00000278616 CMYA5Q8N3K9 4069 aa2.86□□□□□ -1.95
ATM-201ENST00000278616 ANK2Q01484 3957 aa2.86□□□□□ -1.95
ATM-201ENST00000278616 SPRR2GQ9BYE4 73 aa2.84□□□□□ -1.95
ATM-201ENST00000278616 KRTAP19-5Q3LI72 72 aa2.83□□□□□ -1.96
ATM-201ENST00000278616 VPS13BQ7Z7G8 4022 aa2.81□□□□□ -1.96
ATM-201ENST00000278616 SPRR2FQ96RM1 72 aa2.81□□□□□ -1.96
ATM-201ENST00000278616 KRTAP19-4Q3LI73 84 aa2.8□□□□□ -1.96
ATM-201ENST00000278616 MT1HP80294 61 aa2.79□□□□□ -1.96
ATM-201ENST00000278616 DNAH7Q8WXX0 4024 aa2.76□□□□□ -1.97
ATM-201ENST00000278616 MT2AP02795 61 aa2.75□□□□□ -1.97
ATM-201ENST00000278616 DNAH2Q9P225 4427 aa2.74□□□□□ -1.97
ATM-201ENST00000278616 DNAH3Q8TD57 4116 aa2.73□□□□□ -1.97
ATM-201ENST00000278616 LCE3BQ5TA77 95 aa2.73□□□□□ -1.97
ATM-201ENST00000278616 KRTAP12-4P60329 112 aa2.73□□□□□ -1.97
ATM-201ENST00000278616 MT1FP04733 61 aa2.72□□□□□ -1.97
ATM-201ENST00000278616 DNAH10Q8IVF4 4471 aa2.7□□□□□ -1.98
ATM-201ENST00000278616 HECTD4Q9Y4D8 3996 aa2.7□□□□□ -1.98
ATM-201ENST00000278616 DNAH6Q9C0G6 4158 aa2.67□□□□□ -1.98
ATM-201ENST00000278616 DNAH1Q9P2D7 4330 aa2.65□□□□□ -1.98
ATM-201ENST00000278616 DNAH9Q9NYC9 4486 aa2.62□□□□□ -1.99
ATM-201ENST00000278616 MT1GP13640 62 aa2.62□□□□□ -1.99
ATM-201ENST00000278616 SPRR2EP22531 72 aa2.62□□□□□ -1.99
ATM-201ENST00000278616 SPRR2BP35325 72 aa2.62□□□□□ -1.99
ATM-201ENST00000278616 SPRR2AP35326 72 aa2.62□□□□□ -1.99
ATM-201ENST00000278616 DNAH8Q96JB1 4490 aa2.61□□□□□ -1.99
ATM-201ENST00000278616 LCE3DQ9BYE3 92 aa2.6□□□□□ -1.99
ATM-201ENST00000278616 LCE2BO14633 110 aa2.58□□□□□ -2
ATM-201ENST00000278616 KRTAP17-1Q9BYP8 105 aa2.56□□□□□ -2
ATM-201ENST00000278616 KRTAP4-8A0A0G2JLE6 195 aa2.54□□□□□ -2
ATM-201ENST00000278616 KRTAP4-8Q9BYQ9 185 aa2.54□□□□□ -2
ATM-201ENST00000278616 SPRR2DP22532 72 aa2.54□□□□□ -2
ATM-201ENST00000278616 LCE3EQ5T5B0 92 aa2.53□□□□□ -2
ATM-201ENST00000278616 FAT2Q9NYQ8 4349 aa2.53□□□□□ -2
ATM-201ENST00000278616 SPRR5A0A1B0GTR4 108 aa2.52□□□□□ -2.01
ATM-201ENST00000278616 PRKDCP78527 4128 aaKnown RBP2.51□□□□□ -2.01
ATM-201ENST00000278616 KRTAP4-7Q9BYR0 210 aa2.49□□□□□ -2.01
ATM-201ENST00000278616 MT1XP80297 61 aa2.48□□□□□ -2.01
ATM-201ENST00000278616 KRTAP19-8Q3LI54 63 aa2.48□□□□□ -2.01
ATM-201ENST00000278616 KRTAP19-1Q8IUB9 90 aa2.48□□□□□ -2.01
ATM-201ENST00000278616 FLGP20930 4061 aaPredicted RBP2.47□□□□□ -2.01
ATM-201ENST00000278616 DNAH17Q9UFH2 4485 aa2.46□□□□□ -2.01
ATM-201ENST00000278616 MT3P25713 68 aa2.45□□□□□ -2.02
ATM-201ENST00000278616 DNAH11Q96DT5 4516 aa2.45□□□□□ -2.02
ATM-201ENST00000278616 STARD9Q9P2P6 4700 aa2.45□□□□□ -2.02
ATM-201ENST00000278616 VPS13DQ5THJ4 4388 aa2.45□□□□□ -2.02
ATM-201ENST00000278616 FAT1Q14517 4588 aa2.43□□□□□ -2.02
ATM-201ENST00000278616 LPAP08519 4548 aa2.42□□□□□ -2.02
ATM-201ENST00000278616 PLECQ15149 4684 aaKnown RBP2.41□□□□□ -2.02
ATM-201ENST00000278616 PRM1P04553 51 aa2.41□□□□□ -2.02
ATM-201ENST00000278616 DNAH5Q8TE73 4624 aa2.4□□□□□ -2.03
ATM-201ENST00000278616 MT1BP07438 61 aa2.4□□□□□ -2.03
ATM-201ENST00000278616 DYNC2H1Q8NCM8 4307 aaKnown RBP2.39□□□□□ -2.03
ATM-201ENST00000278616 LCE2CQ5TA81 110 aa2.39□□□□□ -2.03
ATM-201ENST00000278616 LOC100996750A0A140TA64 210 aa2.38□□□□□ -2.03
ATM-201ENST00000278616 MT1LQ93083 61 aa2.38□□□□□ -2.03
ATM-201ENST00000278616 LRP1BQ9NZR2 4599 aa2.38□□□□□ -2.03
ATM-201ENST00000278616 KRTAP9-8Q9BYQ0 159 aa2.37□□□□□ -2.03
ATM-201ENST00000278616 MT4P47944 62 aa2.36□□□□□ -2.03
ATM-201ENST00000278616 PKHD1L1Q86WI1 4243 aa2.35□□□□□ -2.03
ATM-201ENST00000278616 KRTAP4-3Q9BYR4 195 aa2.34□□□□□ -2.03
ATM-201ENST00000278616 KRTAP19-3Q7Z4W3 81 aa2.34□□□□□ -2.04
ATM-201ENST00000278616 PKHD1P08F94 4074 aa2.33□□□□□ -2.04
ATM-201ENST00000278616 SACSQ9NZJ4 4579 aa2.32□□□□□ -2.04
ATM-201ENST00000278616 LCE2DQ5TA82 110 aaPredicted RBP2.32□□□□□ -2.04
ATM-201ENST00000278616 DNHD1Q96M86 4753 aa2.31□□□□□ -2.04
ATM-201ENST00000278616 KRTAP9-3Q9BYQ3 159 aa2.3□□□□□ -2.04
ATM-201ENST00000278616 FAT3Q8TDW7 4589 aa2.3□□□□□ -2.04
ATM-201ENST00000278616 LCE1BQ5T7P3 118 aa2.28□□□□□ -2.04
ATM-201ENST00000278616 KRTAP4-9Q9BYQ8 210 aa2.28□□□□□ -2.04
ATM-201ENST00000278616 MT1EP04732 61 aa2.26□□□□□ -2.05
ATM-201ENST00000278616 PKD1P98161 4303 aa2.25□□□□□ -2.05
ATM-201ENST00000278616 LCE1DQ5T752 114 aa2.25□□□□□ -2.05
ATM-201ENST00000278616 LRP1Q07954 4544 aaKnown RBP2.24□□□□□ -2.05
ATM-201ENST00000278616 DYNC1H1Q14204 4646 aaKnown RBP2.21□□□□□ -2.06
ATM-201ENST00000278616 APOBP04114 4563 aaKnown RBP2.21□□□□□ -2.06
ATM-201ENST00000278616 MT1MQ8N339 61 aa2.2□□□□□ -2.06
ATM-201ENST00000278616 MYCBP2O75592 4640 aa2.2□□□□□ -2.06
ATM-201ENST00000278616 HSPG2P98160 4391 aa2.17□□□□□ -2.06
ATM-201ENST00000278616 TNXBP22105 4242 aa2.13□□□□□ -2.07
ATM-201ENST00000278616 KRTAP2-3P0C7H8 128 aa2.12□□□□□ -2.07
ATM-201ENST00000278616 KRTAP2-4Q9BYR9 128 aa2.12□□□□□ -2.07
ATM-201ENST00000278616 KRTAP2-1Q9BYU5 128 aa2.12□□□□□ -2.07
ATM-201ENST00000278616 KMT2CQ8NEZ4 4911 aaKnown RBP2.11□□□□□ -2.07
ATM-201ENST00000278616 LCE5AQ5TCM9 118 aa2.11□□□□□ -2.07
ATM-201ENST00000278616 MT1AP04731 61 aa2.08□□□□□ -2.08
ATM-201ENST00000278616 KRTAP19-2Q3LHN2 52 aa2.08□□□□□ -2.08
ATM-201ENST00000278616 HYDINQ4G0P3 5121 aa2.07□□□□□ -2.08
ATM-201ENST00000278616 KRTAP19-6Q3LI70 58 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms