RNA–Protein interactions for RNA: ENST00000275493.6

EGFR-201, Transcript of epidermal growth factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EGFR, Length 9,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-201ENST00000275493 DNAH1Q9P2D7 4330 aa4.41□□□□□ -1.7
EGFR-201ENST00000275493 CSMD2Q7Z408 3487 aa4.4□□□□□ -1.71
EGFR-201ENST00000275493 AKAP9Q99996 3911 aa4.39□□□□□ -1.71
EGFR-201ENST00000275493 CUBNO60494 3623 aa4.39□□□□□ -1.71
EGFR-201ENST00000275493 MT2AP02795 61 aa4.39□□□□□ -1.71
EGFR-201ENST00000275493 KRTAP10-7P60409 375 aaPredicted RBP4.38□□□□□ -1.71
EGFR-201ENST00000275493 DNAH9Q9NYC9 4486 aa4.34□□□□□ -1.72
EGFR-201ENST00000275493 BSNQ9UPA5 3926 aa4.31□□□□□ -1.72
EGFR-201ENST00000275493 VPS13CQ709C8 3753 aa4.3□□□□□ -1.72
EGFR-201ENST00000275493 DNAH2Q9P225 4427 aa4.3□□□□□ -1.72
EGFR-201ENST00000275493 DNAH5Q8TE73 4624 aa4.3□□□□□ -1.72
EGFR-201ENST00000275493 SVEP1Q4LDE5 3571 aa4.29□□□□□ -1.72
EGFR-201ENST00000275493 SPRR2GQ9BYE4 73 aa4.29□□□□□ -1.72
EGFR-201ENST00000275493 MT1FP04733 61 aa4.29□□□□□ -1.72
EGFR-201ENST00000275493 KRTAP19-5Q3LI72 72 aa4.26□□□□□ -1.73
EGFR-201ENST00000275493 SPRR2EP22531 72 aa4.23□□□□□ -1.73
EGFR-201ENST00000275493 SPRR2BP35325 72 aa4.23□□□□□ -1.73
EGFR-201ENST00000275493 SPRR2AP35326 72 aa4.23□□□□□ -1.73
EGFR-201ENST00000275493 DNAH11Q96DT5 4516 aa4.21□□□□□ -1.74
EGFR-201ENST00000275493 MUC3AQ02505 3323 aa4.21□□□□□ -1.74
EGFR-201ENST00000275493 DNAH10Q8IVF4 4471 aa4.19□□□□□ -1.74
EGFR-201ENST00000275493 DNAH3Q8TD57 4116 aa4.17□□□□□ -1.74
EGFR-201ENST00000275493 LCE3CQ5T5A8 94 aa4.15□□□□□ -1.74
EGFR-201ENST00000275493 CSMD3Q7Z407 3707 aa4.12□□□□□ -1.75
EGFR-201ENST00000275493 FAT2Q9NYQ8 4349 aa4.12□□□□□ -1.75
EGFR-201ENST00000275493 PLECQ15149 4684 aaKnown RBP4.12□□□□□ -1.75
EGFR-201ENST00000275493 SPRR2DP22532 72 aa4.11□□□□□ -1.75
EGFR-201ENST00000275493 DNAH17Q9UFH2 4485 aa4.08□□□□□ -1.76
EGFR-201ENST00000275493 DYNC1H1Q14204 4646 aaKnown RBP4.06□□□□□ -1.76
EGFR-201ENST00000275493 VPS13DQ5THJ4 4388 aa4.06□□□□□ -1.76
EGFR-201ENST00000275493 DNAH7Q8WXX0 4024 aa4.04□□□□□ -1.76
EGFR-201ENST00000275493 KRTAP19-4Q3LI73 84 aa4.03□□□□□ -1.76
EGFR-201ENST00000275493 DYNC2H1Q8NCM8 4307 aaKnown RBP4.02□□□□□ -1.77
EGFR-201ENST00000275493 LCE2BO14633 110 aa4.02□□□□□ -1.77
EGFR-201ENST00000275493 HECTD4Q9Y4D8 3996 aa4□□□□□ -1.77
EGFR-201ENST00000275493 LRP1BQ9NZR2 4599 aa3.99□□□□□ -1.77
EGFR-201ENST00000275493 DNAH6Q9C0G6 4158 aa3.99□□□□□ -1.77
EGFR-201ENST00000275493 LCE3BQ5TA77 95 aa3.97□□□□□ -1.77
EGFR-201ENST00000275493 ANK2Q01484 3957 aa3.96□□□□□ -1.78
EGFR-201ENST00000275493 STARD9Q9P2P6 4700 aa3.96□□□□□ -1.78
EGFR-201ENST00000275493 ZNF469Q96JG9 3925 aaPredicted RBP3.95□□□□□ -1.78
EGFR-201ENST00000275493 KRTAP19-8Q3LI54 63 aa3.94□□□□□ -1.78
EGFR-201ENST00000275493 CMYA5Q8N3K9 4069 aa3.94□□□□□ -1.78
EGFR-201ENST00000275493 SACSQ9NZJ4 4579 aa3.94□□□□□ -1.78
EGFR-201ENST00000275493 DNHD1Q96M86 4753 aa3.93□□□□□ -1.78
EGFR-201ENST00000275493 KRTAP12-4P60329 112 aa3.93□□□□□ -1.78
EGFR-201ENST00000275493 PRKDCP78527 4128 aaKnown RBP3.93□□□□□ -1.78
EGFR-201ENST00000275493 VPS13BQ7Z7G8 4022 aa3.91□□□□□ -1.78
EGFR-201ENST00000275493 MT1GP13640 62 aa3.91□□□□□ -1.78
EGFR-201ENST00000275493 RYR1P21817 5038 aa3.89□□□□□ -1.79
EGFR-201ENST00000275493 RYR3Q15413 4870 aa3.89□□□□□ -1.79
EGFR-201ENST00000275493 DNAH8Q96JB1 4490 aa3.88□□□□□ -1.79
EGFR-201ENST00000275493 MT1XP80297 61 aa3.87□□□□□ -1.79
EGFR-201ENST00000275493 KRTAP19-1Q8IUB9 90 aa3.87□□□□□ -1.79
EGFR-201ENST00000275493 LYSTQ99698 3801 aa3.85□□□□□ -1.79
EGFR-201ENST00000275493 FAT1Q14517 4588 aa3.84□□□□□ -1.79
EGFR-201ENST00000275493 KRTAP17-1Q9BYP8 105 aa3.84□□□□□ -1.8
EGFR-201ENST00000275493 KMT2AQ03164 3969 aa3.82□□□□□ -1.8
EGFR-201ENST00000275493 APOBP04114 4563 aaKnown RBP3.8□□□□□ -1.8
EGFR-201ENST00000275493 HERC1Q15751 4861 aa3.8□□□□□ -1.8
EGFR-201ENST00000275493 MT1BP07438 61 aa3.8□□□□□ -1.8
EGFR-201ENST00000275493 KRTAP9-8Q9BYQ0 159 aa3.79□□□□□ -1.8
EGFR-201ENST00000275493 LRP1Q07954 4544 aaKnown RBP3.78□□□□□ -1.8
EGFR-201ENST00000275493 LCE2CQ5TA81 110 aa3.77□□□□□ -1.81
EGFR-201ENST00000275493 FAT3Q8TDW7 4589 aa3.77□□□□□ -1.81
EGFR-201ENST00000275493 KRTAP4-8A0A0G2JLE6 195 aa3.76□□□□□ -1.81
EGFR-201ENST00000275493 KRTAP4-8Q9BYQ9 185 aa3.76□□□□□ -1.81
EGFR-201ENST00000275493 PKHD1L1Q86WI1 4243 aa3.75□□□□□ -1.81
EGFR-201ENST00000275493 KRTAP9-3Q9BYQ3 159 aa3.75□□□□□ -1.81
EGFR-201ENST00000275493 LCE2DQ5TA82 110 aaPredicted RBP3.73□□□□□ -1.81
EGFR-201ENST00000275493 FRAS1Q86XX4 4008 aa3.68□□□□□ -1.82
EGFR-201ENST00000275493 LCE3DQ9BYE3 92 aa3.67□□□□□ -1.82
EGFR-201ENST00000275493 HSPG2P98160 4391 aa3.66□□□□□ -1.82
EGFR-201ENST00000275493 KRTAP19-3Q7Z4W3 81 aa3.66□□□□□ -1.82
EGFR-201ENST00000275493 RYR2Q92736 4967 aa3.64□□□□□ -1.83
EGFR-201ENST00000275493 MT4P47944 62 aa3.63□□□□□ -1.83
EGFR-201ENST00000275493 KRTAP9-2Q9BYQ4 174 aa3.61□□□□□ -1.83
EGFR-201ENST00000275493 LCE3EQ5T5B0 92 aa3.59□□□□□ -1.83
EGFR-201ENST00000275493 SPRR5A0A1B0GTR4 108 aa3.57□□□□□ -1.84
EGFR-201ENST00000275493 PKD1P98161 4303 aa3.56□□□□□ -1.84
EGFR-201ENST00000275493 BIRC6Q9NR09 4857 aa3.55□□□□□ -1.84
EGFR-201ENST00000275493 MT1LQ93083 61 aa3.55□□□□□ -1.84
EGFR-201ENST00000275493 MT1EP04732 61 aa3.52□□□□□ -1.85
EGFR-201ENST00000275493 MYCBP2O75592 4640 aa3.52□□□□□ -1.85
EGFR-201ENST00000275493 PKHD1P08F94 4074 aa3.51□□□□□ -1.85
EGFR-201ENST00000275493 KRTAP4-7Q9BYR0 210 aa3.5□□□□□ -1.85
EGFR-201ENST00000275493 PCLOQ9Y6V0 5065 aa3.5□□□□□ -1.85
EGFR-201ENST00000275493 HERC2O95714 4834 aa3.48□□□□□ -1.85
EGFR-201ENST00000275493 KRTAP9-6A0A140TA67 174 aa3.48□□□□□ -1.85
EGFR-201ENST00000275493 MT3P25713 68 aa3.47□□□□□ -1.85
EGFR-201ENST00000275493 KRTAP19-6Q3LI70 58 aa3.46□□□□□ -1.86
EGFR-201ENST00000275493 MT1MQ8N339 61 aa3.46□□□□□ -1.86
EGFR-201ENST00000275493 FLGP20930 4061 aaPredicted RBP3.44□□□□□ -1.86
EGFR-201ENST00000275493 KIAA1109Q2LD37 5005 aa3.42□□□□□ -1.86
EGFR-201ENST00000275493 LCE1BQ5T7P3 118 aa3.42□□□□□ -1.86
EGFR-201ENST00000275493 MUC17Q685J3 4493 aa3.41□□□□□ -1.86
EGFR-201ENST00000275493 LCE1DQ5T752 114 aa3.41□□□□□ -1.86
EGFR-201ENST00000275493 KRTAP20-1Q3LI63 56 aa3.4□□□□□ -1.86
EGFR-201ENST00000275493 KRTAP19-2Q3LHN2 52 aa3.38□□□□□ -1.87
EGFR-201ENST00000275493 LPAP08519 4548 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms