RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 FBN3Q75N90 2809 aa3.64□□□□□ -1.83
SCUBE3-201ENST00000274938 ALMS1Q8TCU4 4167 aa3.62□□□□□ -1.83
SCUBE3-201ENST00000274938 MEGF8Q7Z7M0 2845 aa3.6□□□□□ -1.83
SCUBE3-201ENST00000274938 KRTAP10-4P60372 401 aaPredicted RBP3.59□□□□□ -1.83
SCUBE3-201ENST00000274938 DNAH9Q9NYC9 4486 aa3.59□□□□□ -1.83
SCUBE3-201ENST00000274938 ANK2Q01484 3957 aa3.57□□□□□ -1.84
SCUBE3-201ENST00000274938 LORP23490 312 aaPredicted RBP3.56□□□□□ -1.84
SCUBE3-201ENST00000274938 KRTAP8-1Q8IUC2 63 aa3.53□□□□□ -1.84
SCUBE3-201ENST00000274938 LYSTQ99698 3801 aa3.53□□□□□ -1.84
SCUBE3-201ENST00000274938 KMT2AQ03164 3969 aa3.52□□□□□ -1.85
SCUBE3-201ENST00000274938 KRTAP10-7P60409 375 aaPredicted RBP3.51□□□□□ -1.85
SCUBE3-201ENST00000274938 KRTAP4-5Q9BYR2 181 aa3.5□□□□□ -1.85
SCUBE3-201ENST00000274938 DNAH3Q8TD57 4116 aa3.5□□□□□ -1.85
SCUBE3-201ENST00000274938 DNAH1Q9P2D7 4330 aa3.49□□□□□ -1.85
SCUBE3-201ENST00000274938 PRKDCP78527 4128 aaKnown RBP3.49□□□□□ -1.85
SCUBE3-201ENST00000274938 DNAH10Q8IVF4 4471 aa3.48□□□□□ -1.85
SCUBE3-201ENST00000274938 FRAS1Q86XX4 4008 aa3.45□□□□□ -1.86
SCUBE3-201ENST00000274938 KRTAP19-4Q3LI73 84 aa3.44□□□□□ -1.86
SCUBE3-201ENST00000274938 DNAH7Q8WXX0 4024 aa3.42□□□□□ -1.86
SCUBE3-201ENST00000274938 PLECQ15149 4684 aaKnown RBP3.41□□□□□ -1.86
SCUBE3-201ENST00000274938 STARD9Q9P2P6 4700 aa3.37□□□□□ -1.87
SCUBE3-201ENST00000274938 SPRR2GQ9BYE4 73 aa3.36□□□□□ -1.87
SCUBE3-201ENST00000274938 LCE3CQ5T5A8 94 aa3.34□□□□□ -1.87
SCUBE3-201ENST00000274938 VPS13DQ5THJ4 4388 aa3.33□□□□□ -1.88
SCUBE3-201ENST00000274938 VPS13BQ7Z7G8 4022 aa3.33□□□□□ -1.88
SCUBE3-201ENST00000274938 HECTD4Q9Y4D8 3996 aa3.33□□□□□ -1.88
SCUBE3-201ENST00000274938 DNAH2Q9P225 4427 aa3.32□□□□□ -1.88
SCUBE3-201ENST00000274938 DNAH6Q9C0G6 4158 aa3.3□□□□□ -1.88
SCUBE3-201ENST00000274938 KRTAP19-5Q3LI72 72 aa3.3□□□□□ -1.88
SCUBE3-201ENST00000274938 FAT2Q9NYQ8 4349 aa3.29□□□□□ -1.88
SCUBE3-201ENST00000274938 DYNC2H1Q8NCM8 4307 aaKnown RBP3.29□□□□□ -1.88
SCUBE3-201ENST00000274938 MT2AP02795 61 aa3.29□□□□□ -1.88
SCUBE3-201ENST00000274938 MT1HP80294 61 aa3.28□□□□□ -1.88
SCUBE3-201ENST00000274938 DNAH11Q96DT5 4516 aa3.28□□□□□ -1.88
SCUBE3-201ENST00000274938 DNAH17Q9UFH2 4485 aa3.27□□□□□ -1.89
SCUBE3-201ENST00000274938 KRTAP4-1Q9BYQ7 146 aa3.24□□□□□ -1.89
SCUBE3-201ENST00000274938 SPRR2FQ96RM1 72 aa3.23□□□□□ -1.89
SCUBE3-201ENST00000274938 DNAH5Q8TE73 4624 aa3.23□□□□□ -1.89
SCUBE3-201ENST00000274938 LRP1BQ9NZR2 4599 aa3.21□□□□□ -1.9
SCUBE3-201ENST00000274938 DNHD1Q96M86 4753 aa3.2□□□□□ -1.9
SCUBE3-201ENST00000274938 MT1FP04733 61 aa3.18□□□□□ -1.9
SCUBE3-201ENST00000274938 DNAH8Q96JB1 4490 aa3.15□□□□□ -1.91
SCUBE3-201ENST00000274938 PKHD1P08F94 4074 aa3.14□□□□□ -1.91
SCUBE3-201ENST00000274938 KRTAP12-4P60329 112 aa3.1□□□□□ -1.91
SCUBE3-201ENST00000274938 KRTAP19-8Q3LI54 63 aa3.1□□□□□ -1.91
SCUBE3-201ENST00000274938 FAT1Q14517 4588 aa3.1□□□□□ -1.91
SCUBE3-201ENST00000274938 SPRR5A0A1B0GTR4 108 aa3.09□□□□□ -1.91
SCUBE3-201ENST00000274938 SPRR2EP22531 72 aa3.08□□□□□ -1.92
SCUBE3-201ENST00000274938 SPRR2BP35325 72 aa3.08□□□□□ -1.92
SCUBE3-201ENST00000274938 SPRR2AP35326 72 aa3.08□□□□□ -1.92
SCUBE3-201ENST00000274938 DYNC1H1Q14204 4646 aaKnown RBP3.08□□□□□ -1.92
SCUBE3-201ENST00000274938 LCE3BQ5TA77 95 aa3.08□□□□□ -1.92
SCUBE3-201ENST00000274938 SACSQ9NZJ4 4579 aa3.08□□□□□ -1.92
SCUBE3-201ENST00000274938 HSPG2P98160 4391 aa3.04□□□□□ -1.92
SCUBE3-201ENST00000274938 HERC1Q15751 4861 aa3.04□□□□□ -1.92
SCUBE3-201ENST00000274938 PKD1P98161 4303 aa3.02□□□□□ -1.93
SCUBE3-201ENST00000274938 APOBP04114 4563 aaKnown RBP3□□□□□ -1.93
SCUBE3-201ENST00000274938 KRTAP19-1Q8IUB9 90 aa3□□□□□ -1.93
SCUBE3-201ENST00000274938 LCE3DQ9BYE3 92 aa3□□□□□ -1.93
SCUBE3-201ENST00000274938 HYDINQ4G0P3 5121 aa3□□□□□ -1.93
SCUBE3-201ENST00000274938 KRTAP17-1Q9BYP8 105 aa2.99□□□□□ -1.93
SCUBE3-201ENST00000274938 LCE3EQ5T5B0 92 aa2.98□□□□□ -1.93
SCUBE3-201ENST00000274938 MT1XP80297 61 aa2.98□□□□□ -1.93
SCUBE3-201ENST00000274938 MT1GP13640 62 aa2.98□□□□□ -1.93
SCUBE3-201ENST00000274938 SPRR2DP22532 72 aa2.97□□□□□ -1.93
SCUBE3-201ENST00000274938 LRP1Q07954 4544 aaKnown RBP2.97□□□□□ -1.93
SCUBE3-201ENST00000274938 TNXBP22105 4242 aa2.95□□□□□ -1.94
SCUBE3-201ENST00000274938 LPAP08519 4548 aa2.92□□□□□ -1.94
SCUBE3-201ENST00000274938 LCE2BO14633 110 aa2.91□□□□□ -1.94
SCUBE3-201ENST00000274938 PKHD1L1Q86WI1 4243 aa2.91□□□□□ -1.94
SCUBE3-201ENST00000274938 MT1BP07438 61 aa2.91□□□□□ -1.94
SCUBE3-201ENST00000274938 FAT3Q8TDW7 4589 aa2.91□□□□□ -1.94
SCUBE3-201ENST00000274938 RYR1P21817 5038 aa2.91□□□□□ -1.94
SCUBE3-201ENST00000274938 MYCBP2O75592 4640 aa2.88□□□□□ -1.95
SCUBE3-201ENST00000274938 RYR3Q15413 4870 aa2.85□□□□□ -1.95
SCUBE3-201ENST00000274938 MT1LQ93083 61 aa2.82□□□□□ -1.96
SCUBE3-201ENST00000274938 KRTAP9-8Q9BYQ0 159 aa2.8□□□□□ -1.96
SCUBE3-201ENST00000274938 KRTAP19-3Q7Z4W3 81 aa2.79□□□□□ -1.96
SCUBE3-201ENST00000274938 KRTAP4-8A0A0G2JLE6 195 aa2.79□□□□□ -1.96
SCUBE3-201ENST00000274938 KRTAP4-8Q9BYQ9 185 aa2.79□□□□□ -1.96
SCUBE3-201ENST00000274938 RYR2Q92736 4967 aa2.78□□□□□ -1.96
SCUBE3-201ENST00000274938 KRTAP9-3Q9BYQ3 159 aa2.77□□□□□ -1.97
SCUBE3-201ENST00000274938 PRM1P04553 51 aa2.77□□□□□ -1.97
SCUBE3-201ENST00000274938 KRTAP4-7Q9BYR0 210 aa2.77□□□□□ -1.97
SCUBE3-201ENST00000274938 LCE2CQ5TA81 110 aa2.76□□□□□ -1.97
SCUBE3-201ENST00000274938 KMT2CQ8NEZ4 4911 aaKnown RBP2.76□□□□□ -1.97
SCUBE3-201ENST00000274938 MT3P25713 68 aa2.74□□□□□ -1.97
SCUBE3-201ENST00000274938 LCE2DQ5TA82 110 aaPredicted RBP2.73□□□□□ -1.97
SCUBE3-201ENST00000274938 MT1EP04732 61 aa2.72□□□□□ -1.97
SCUBE3-201ENST00000274938 FLGP20930 4061 aaPredicted RBP2.72□□□□□ -1.97
SCUBE3-201ENST00000274938 MT4P47944 62 aa2.71□□□□□ -1.98
SCUBE3-201ENST00000274938 LRP2P98164 4655 aa2.7□□□□□ -1.98
SCUBE3-201ENST00000274938 KIAA1109Q2LD37 5005 aa2.67□□□□□ -1.98
SCUBE3-201ENST00000274938 MT1MQ8N339 61 aa2.65□□□□□ -1.99
SCUBE3-201ENST00000274938 LOC100996750A0A140TA64 210 aa2.64□□□□□ -1.99
SCUBE3-201ENST00000274938 LCE1BQ5T7P3 118 aa2.64□□□□□ -1.99
SCUBE3-201ENST00000274938 HERC2O95714 4834 aa2.64□□□□□ -1.99
SCUBE3-201ENST00000274938 MUC17Q685J3 4493 aa2.62□□□□□ -1.99
SCUBE3-201ENST00000274938 KRTAP9-2Q9BYQ4 174 aa2.61□□□□□ -1.99
SCUBE3-201ENST00000274938 BIRC6Q9NR09 4857 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms