RNA–Protein interactions for RNA: ENST00000269122.7

CLTC-201, Transcript of clathrin heavy chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTC, Length 7,760 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-201ENST00000269122 ANK2Q01484 3957 aa3.55□□□□□ -1.84
CLTC-201ENST00000269122 KRTAP4-5Q9BYR2 181 aa3.54□□□□□ -1.84
CLTC-201ENST00000269122 KRTAP10-12P60413 245 aa3.51□□□□□ -1.85
CLTC-201ENST00000269122 LCE3AQ5TA76 89 aa3.51□□□□□ -1.85
CLTC-201ENST00000269122 DNAH2Q9P225 4427 aa3.5□□□□□ -1.85
CLTC-201ENST00000269122 KMT2AQ03164 3969 aa3.49□□□□□ -1.85
CLTC-201ENST00000269122 LORP23490 312 aaPredicted RBP3.49□□□□□ -1.85
CLTC-201ENST00000269122 KRTAP12-3P60328 96 aa3.44□□□□□ -1.86
CLTC-201ENST00000269122 KRTAP10-5P60370 271 aa3.44□□□□□ -1.86
CLTC-201ENST00000269122 VPS13BQ7Z7G8 4022 aa3.42□□□□□ -1.86
CLTC-201ENST00000269122 DNAH3Q8TD57 4116 aa3.41□□□□□ -1.86
CLTC-201ENST00000269122 DNAH1Q9P2D7 4330 aa3.4□□□□□ -1.87
CLTC-201ENST00000269122 DNAH7Q8WXX0 4024 aa3.39□□□□□ -1.87
CLTC-201ENST00000269122 MT1HL1P0DM35 61 aa3.38□□□□□ -1.87
CLTC-201ENST00000269122 DNAH8Q96JB1 4490 aa3.37□□□□□ -1.87
CLTC-201ENST00000269122 HECTD4Q9Y4D8 3996 aa3.27□□□□□ -1.89
CLTC-201ENST00000269122 DNAH6Q9C0G6 4158 aa3.27□□□□□ -1.89
CLTC-201ENST00000269122 DNAH9Q9NYC9 4486 aa3.27□□□□□ -1.89
CLTC-201ENST00000269122 DNAH11Q96DT5 4516 aa3.23□□□□□ -1.89
CLTC-201ENST00000269122 KRTAP8-1Q8IUC2 63 aa3.23□□□□□ -1.89
CLTC-201ENST00000269122 PRKDCP78527 4128 aaKnown RBP3.22□□□□□ -1.89
CLTC-201ENST00000269122 KRTAP23-1A1A580 65 aa3.18□□□□□ -1.9
CLTC-201ENST00000269122 KRTAP10-4P60372 401 aaPredicted RBP3.18□□□□□ -1.9
CLTC-201ENST00000269122 PLECQ15149 4684 aaKnown RBP3.18□□□□□ -1.9
CLTC-201ENST00000269122 DNAH17Q9UFH2 4485 aa3.16□□□□□ -1.9
CLTC-201ENST00000269122 STARD9Q9P2P6 4700 aa3.14□□□□□ -1.91
CLTC-201ENST00000269122 KRTAP4-1Q9BYQ7 146 aa3.12□□□□□ -1.91
CLTC-201ENST00000269122 VPS13DQ5THJ4 4388 aa3.11□□□□□ -1.91
CLTC-201ENST00000269122 FAT2Q9NYQ8 4349 aa3.1□□□□□ -1.91
CLTC-201ENST00000269122 KRTAP19-5Q3LI72 72 aa3.08□□□□□ -1.92
CLTC-201ENST00000269122 MT1HP80294 61 aa3.06□□□□□ -1.92
CLTC-201ENST00000269122 SPRR2FQ96RM1 72 aa3.06□□□□□ -1.92
CLTC-201ENST00000269122 DYNC2H1Q8NCM8 4307 aaKnown RBP3.05□□□□□ -1.92
CLTC-201ENST00000269122 APOBP04114 4563 aaKnown RBP3.04□□□□□ -1.92
CLTC-201ENST00000269122 LCE3CQ5T5A8 94 aa3.02□□□□□ -1.93
CLTC-201ENST00000269122 DNAH5Q8TE73 4624 aa3.02□□□□□ -1.93
CLTC-201ENST00000269122 FAT1Q14517 4588 aa3□□□□□ -1.93
CLTC-201ENST00000269122 LRP1BQ9NZR2 4599 aa2.99□□□□□ -1.93
CLTC-201ENST00000269122 LCE3BQ5TA77 95 aa2.98□□□□□ -1.93
CLTC-201ENST00000269122 FAT3Q8TDW7 4589 aa2.96□□□□□ -1.94
CLTC-201ENST00000269122 PKHD1P08F94 4074 aa2.96□□□□□ -1.94
CLTC-201ENST00000269122 MT2AP02795 61 aa2.95□□□□□ -1.94
CLTC-201ENST00000269122 KRTAP10-7P60409 375 aaPredicted RBP2.95□□□□□ -1.94
CLTC-201ENST00000269122 MT1FP04733 61 aa2.94□□□□□ -1.94
CLTC-201ENST00000269122 SACSQ9NZJ4 4579 aa2.93□□□□□ -1.94
CLTC-201ENST00000269122 MYCBP2O75592 4640 aa2.93□□□□□ -1.94
CLTC-201ENST00000269122 LPAP08519 4548 aa2.93□□□□□ -1.94
CLTC-201ENST00000269122 PKD1P98161 4303 aa2.92□□□□□ -1.94
CLTC-201ENST00000269122 LRP1Q07954 4544 aaKnown RBP2.92□□□□□ -1.94
CLTC-201ENST00000269122 FLGP20930 4061 aaPredicted RBP2.92□□□□□ -1.94
CLTC-201ENST00000269122 KRTAP12-4P60329 112 aa2.91□□□□□ -1.94
CLTC-201ENST00000269122 SPRR2GQ9BYE4 73 aa2.91□□□□□ -1.94
CLTC-201ENST00000269122 SPRR2EP22531 72 aa2.89□□□□□ -1.95
CLTC-201ENST00000269122 SPRR2BP35325 72 aa2.89□□□□□ -1.95
CLTC-201ENST00000269122 SPRR2AP35326 72 aa2.89□□□□□ -1.95
CLTC-201ENST00000269122 PKHD1L1Q86WI1 4243 aa2.86□□□□□ -1.95
CLTC-201ENST00000269122 MT1GP13640 62 aa2.86□□□□□ -1.95
CLTC-201ENST00000269122 RYR1P21817 5038 aa2.84□□□□□ -1.95
CLTC-201ENST00000269122 DYNC1H1Q14204 4646 aaKnown RBP2.82□□□□□ -1.96
CLTC-201ENST00000269122 KRTAP17-1Q9BYP8 105 aa2.79□□□□□ -1.96
CLTC-201ENST00000269122 KRTAP4-8A0A0G2JLE6 195 aa2.78□□□□□ -1.96
CLTC-201ENST00000269122 KRTAP4-8Q9BYQ9 185 aa2.78□□□□□ -1.96
CLTC-201ENST00000269122 TNXBP22105 4242 aa2.78□□□□□ -1.97
CLTC-201ENST00000269122 SPRR2DP22532 72 aa2.77□□□□□ -1.97
CLTC-201ENST00000269122 HSPG2P98160 4391 aa2.76□□□□□ -1.97
CLTC-201ENST00000269122 KRTAP4-7Q9BYR0 210 aa2.75□□□□□ -1.97
CLTC-201ENST00000269122 DNHD1Q96M86 4753 aa2.74□□□□□ -1.97
CLTC-201ENST00000269122 MT1XP80297 61 aa2.73□□□□□ -1.97
CLTC-201ENST00000269122 KRTAP19-1Q8IUB9 90 aa2.72□□□□□ -1.97
CLTC-201ENST00000269122 LCE2BO14633 110 aa2.71□□□□□ -1.98
CLTC-201ENST00000269122 SPRR5A0A1B0GTR4 108 aa2.68□□□□□ -1.98
CLTC-201ENST00000269122 LCE3DQ9BYE3 92 aa2.68□□□□□ -1.98
CLTC-201ENST00000269122 LRP2P98164 4655 aa2.66□□□□□ -1.98
CLTC-201ENST00000269122 BIRC6Q9NR09 4857 aa2.66□□□□□ -1.98
CLTC-201ENST00000269122 PRM1P04553 51 aa2.64□□□□□ -1.99
CLTC-201ENST00000269122 LOC100996750A0A140TA64 210 aa2.63□□□□□ -1.99
CLTC-201ENST00000269122 MT4P47944 62 aa2.61□□□□□ -1.99
CLTC-201ENST00000269122 MT1BP07438 61 aa2.6□□□□□ -1.99
CLTC-201ENST00000269122 LCE3EQ5T5B0 92 aa2.6□□□□□ -1.99
CLTC-201ENST00000269122 RYR2Q92736 4967 aa2.57□□□□□ -2
CLTC-201ENST00000269122 KRTAP19-8Q3LI54 63 aa2.57□□□□□ -2
CLTC-201ENST00000269122 KRTAP9-8Q9BYQ0 159 aa2.57□□□□□ -2
CLTC-201ENST00000269122 HERC1Q15751 4861 aa2.56□□□□□ -2
CLTC-201ENST00000269122 LCE2CQ5TA81 110 aa2.55□□□□□ -2
CLTC-201ENST00000269122 HYDINQ4G0P3 5121 aa2.54□□□□□ -2
CLTC-201ENST00000269122 LCE2DQ5TA82 110 aaPredicted RBP2.54□□□□□ -2
CLTC-201ENST00000269122 KRTAP4-3Q9BYR4 195 aa2.54□□□□□ -2
CLTC-201ENST00000269122 KRTAP4-9Q9BYQ8 210 aa2.53□□□□□ -2
CLTC-201ENST00000269122 KIAA1109Q2LD37 5005 aa2.52□□□□□ -2.01
CLTC-201ENST00000269122 RYR3Q15413 4870 aa2.51□□□□□ -2.01
CLTC-201ENST00000269122 KRTAP9-3Q9BYQ3 159 aa2.49□□□□□ -2.01
CLTC-201ENST00000269122 HERC2O95714 4834 aa2.48□□□□□ -2.01
CLTC-201ENST00000269122 LCE1BQ5T7P3 118 aa2.47□□□□□ -2.01
CLTC-201ENST00000269122 SYNE2Q8WXH0 6885 aaKnown RBP2.47□□□□□ -2.01
CLTC-201ENST00000269122 MT1LQ93083 61 aa2.46□□□□□ -2.01
CLTC-201ENST00000269122 MUC17Q685J3 4493 aa2.44□□□□□ -2.02
CLTC-201ENST00000269122 LCE1DQ5T752 114 aa2.43□□□□□ -2.02
CLTC-201ENST00000269122 EPPK1P58107 5090 aaKnown RBP2.43□□□□□ -2.02
CLTC-201ENST00000269122 KRTAP19-4Q3LI73 84 aa2.43□□□□□ -2.02
CLTC-201ENST00000269122 KRTAP19-3Q7Z4W3 81 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms