RNA–Protein interactions for RNA: ENST00000264485.10

SLC4A4-201, Transcript of solute carrier family 4 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC4A4, Length 5,852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A4-201ENST00000264485 COL7A1Q02388 2944 aa7.27□□□□□ -1.25
SLC4A4-201ENST00000264485 MT2AP02795 61 aa7.24□□□□□ -1.25
SLC4A4-201ENST00000264485 NBPF19A0A087WUL8 3843 aa7.23□□□□□ -1.25
SLC4A4-201ENST00000264485 KRTAP4-1Q9BYQ7 146 aa7.21□□□□□ -1.25
SLC4A4-201ENST00000264485 KRTAP19-4Q3LI73 84 aa7.15□□□□□ -1.26
SLC4A4-201ENST00000264485 DNAH2Q9P225 4427 aa7.14□□□□□ -1.27
SLC4A4-201ENST00000264485 ZFHX3Q15911 3703 aa7.12□□□□□ -1.27
SLC4A4-201ENST00000264485 MT1FP04733 61 aa7.06□□□□□ -1.28
SLC4A4-201ENST00000264485 FBN1P35555 2871 aaKnown RBP7.04□□□□□ -1.28
SLC4A4-201ENST00000264485 LCE3BQ5TA77 95 aa7.01□□□□□ -1.29
SLC4A4-201ENST00000264485 CSMD2Q7Z408 3487 aa6.97□□□□□ -1.29
SLC4A4-201ENST00000264485 DNAH10Q8IVF4 4471 aa6.95□□□□□ -1.3
SLC4A4-201ENST00000264485 KRTAP12-4P60329 112 aa6.94□□□□□ -1.3
SLC4A4-201ENST00000264485 BSNQ9UPA5 3926 aa6.93□□□□□ -1.3
SLC4A4-201ENST00000264485 DNAH11Q96DT5 4516 aa6.92□□□□□ -1.3
SLC4A4-201ENST00000264485 OTOGQ6ZRI0 2925 aa6.91□□□□□ -1.3
SLC4A4-201ENST00000264485 SPRR2EP22531 72 aa6.88□□□□□ -1.31
SLC4A4-201ENST00000264485 SPRR2BP35325 72 aa6.88□□□□□ -1.31
SLC4A4-201ENST00000264485 SPRR2AP35326 72 aa6.88□□□□□ -1.31
SLC4A4-201ENST00000264485 DNAH5Q8TE73 4624 aa6.81□□□□□ -1.32
SLC4A4-201ENST00000264485 TRRAPQ9Y4A5 3859 aa6.78□□□□□ -1.32
SLC4A4-201ENST00000264485 VPS13CQ709C8 3753 aa6.78□□□□□ -1.32
SLC4A4-201ENST00000264485 MT1GP13640 62 aa6.77□□□□□ -1.33
SLC4A4-201ENST00000264485 DNAH1Q9P2D7 4330 aa6.73□□□□□ -1.33
SLC4A4-201ENST00000264485 LCE3DQ9BYE3 92 aa6.67□□□□□ -1.34
SLC4A4-201ENST00000264485 FAT1Q14517 4588 aa6.67□□□□□ -1.34
SLC4A4-201ENST00000264485 SPRR2DP22532 72 aa6.66□□□□□ -1.34
SLC4A4-201ENST00000264485 PLECQ15149 4684 aaKnown RBP6.66□□□□□ -1.34
SLC4A4-201ENST00000264485 DNAH8Q96JB1 4490 aa6.66□□□□□ -1.34
SLC4A4-201ENST00000264485 KRTAP19-8Q3LI54 63 aa6.62□□□□□ -1.35
SLC4A4-201ENST00000264485 DNAH17Q9UFH2 4485 aa6.61□□□□□ -1.35
SLC4A4-201ENST00000264485 LCE2BO14633 110 aa6.61□□□□□ -1.35
SLC4A4-201ENST00000264485 DNAH9Q9NYC9 4486 aa6.6□□□□□ -1.35
SLC4A4-201ENST00000264485 LCE3EQ5T5B0 92 aa6.58□□□□□ -1.36
SLC4A4-201ENST00000264485 MT1XP80297 61 aa6.54□□□□□ -1.36
SLC4A4-201ENST00000264485 KRTAP19-1Q8IUB9 90 aa6.5□□□□□ -1.37
SLC4A4-201ENST00000264485 SPRR5A0A1B0GTR4 108 aa6.47□□□□□ -1.37
SLC4A4-201ENST00000264485 AKAP9Q99996 3911 aa6.43□□□□□ -1.38
SLC4A4-201ENST00000264485 CSMD3Q7Z407 3707 aa6.43□□□□□ -1.38
SLC4A4-201ENST00000264485 SACSQ9NZJ4 4579 aa6.4□□□□□ -1.39
SLC4A4-201ENST00000264485 LRP1Q07954 4544 aaKnown RBP6.35□□□□□ -1.39
SLC4A4-201ENST00000264485 MT1BP07438 61 aa6.33□□□□□ -1.4
SLC4A4-201ENST00000264485 KRTAP4-8A0A0G2JLE6 195 aa6.33□□□□□ -1.4
SLC4A4-201ENST00000264485 KRTAP4-8Q9BYQ9 185 aa6.33□□□□□ -1.4
SLC4A4-201ENST00000264485 DYNC1H1Q14204 4646 aaKnown RBP6.31□□□□□ -1.4
SLC4A4-201ENST00000264485 ZNF469Q96JG9 3925 aaPredicted RBP6.31□□□□□ -1.4
SLC4A4-201ENST00000264485 FAT2Q9NYQ8 4349 aa6.29□□□□□ -1.4
SLC4A4-201ENST00000264485 VPS13DQ5THJ4 4388 aa6.28□□□□□ -1.4
SLC4A4-201ENST00000264485 DNAH3Q8TD57 4116 aa6.27□□□□□ -1.41
SLC4A4-201ENST00000264485 LRP1BQ9NZR2 4599 aa6.24□□□□□ -1.41
SLC4A4-201ENST00000264485 CMYA5Q8N3K9 4069 aa6.23□□□□□ -1.41
SLC4A4-201ENST00000264485 APOBP04114 4563 aaKnown RBP6.23□□□□□ -1.41
SLC4A4-201ENST00000264485 DYNC2H1Q8NCM8 4307 aaKnown RBP6.21□□□□□ -1.42
SLC4A4-201ENST00000264485 LCE2CQ5TA81 110 aa6.2□□□□□ -1.42
SLC4A4-201ENST00000264485 FAT3Q8TDW7 4589 aa6.17□□□□□ -1.42
SLC4A4-201ENST00000264485 PRM1P04553 51 aa6.17□□□□□ -1.42
SLC4A4-201ENST00000264485 KRTAP19-3Q7Z4W3 81 aa6.14□□□□□ -1.43
SLC4A4-201ENST00000264485 LCE2DQ5TA82 110 aaPredicted RBP6.12□□□□□ -1.43
SLC4A4-201ENST00000264485 KRTAP9-8Q9BYQ0 159 aa6.11□□□□□ -1.43
SLC4A4-201ENST00000264485 DNAH6Q9C0G6 4158 aa6.1□□□□□ -1.43
SLC4A4-201ENST00000264485 HERC1Q15751 4861 aa6.1□□□□□ -1.43
SLC4A4-201ENST00000264485 MT1LQ93083 61 aa6.1□□□□□ -1.43
SLC4A4-201ENST00000264485 KRTAP4-7Q9BYR0 210 aa6.07□□□□□ -1.44
SLC4A4-201ENST00000264485 RYR1P21817 5038 aa6.05□□□□□ -1.44
SLC4A4-201ENST00000264485 MT3P25713 68 aa6.04□□□□□ -1.44
SLC4A4-201ENST00000264485 KRTAP9-3Q9BYQ3 159 aa6.03□□□□□ -1.44
SLC4A4-201ENST00000264485 ANK2Q01484 3957 aa6.01□□□□□ -1.45
SLC4A4-201ENST00000264485 MT1EP04732 61 aa5.94□□□□□ -1.46
SLC4A4-201ENST00000264485 DNAH7Q8WXX0 4024 aa5.94□□□□□ -1.46
SLC4A4-201ENST00000264485 LCE1BQ5T7P3 118 aa5.92□□□□□ -1.46
SLC4A4-201ENST00000264485 MYCBP2O75592 4640 aa5.91□□□□□ -1.46
SLC4A4-201ENST00000264485 HSPG2P98160 4391 aa5.9□□□□□ -1.46
SLC4A4-201ENST00000264485 MT4P47944 62 aa5.89□□□□□ -1.47
SLC4A4-201ENST00000264485 VPS13BQ7Z7G8 4022 aa5.89□□□□□ -1.47
SLC4A4-201ENST00000264485 STARD9Q9P2P6 4700 aa5.88□□□□□ -1.47
SLC4A4-201ENST00000264485 PRKDCP78527 4128 aaKnown RBP5.87□□□□□ -1.47
SLC4A4-201ENST00000264485 LCE1DQ5T752 114 aa5.84□□□□□ -1.48
SLC4A4-201ENST00000264485 RYR3Q15413 4870 aa5.83□□□□□ -1.48
SLC4A4-201ENST00000264485 MT1MQ8N339 61 aa5.82□□□□□ -1.48
SLC4A4-201ENST00000264485 LOC100996750A0A140TA64 210 aa5.77□□□□□ -1.49
SLC4A4-201ENST00000264485 KRTAP17-1Q9BYP8 105 aa5.71□□□□□ -1.5
SLC4A4-201ENST00000264485 PKD1P98161 4303 aa5.69□□□□□ -1.5
SLC4A4-201ENST00000264485 FRAS1Q86XX4 4008 aa5.68□□□□□ -1.5
SLC4A4-201ENST00000264485 LYSTQ99698 3801 aa5.68□□□□□ -1.5
SLC4A4-201ENST00000264485 DNHD1Q96M86 4753 aa5.65□□□□□ -1.5
SLC4A4-201ENST00000264485 KRTAP4-3Q9BYR4 195 aa5.61□□□□□ -1.51
SLC4A4-201ENST00000264485 KMT2AQ03164 3969 aa5.55□□□□□ -1.52
SLC4A4-201ENST00000264485 LCE5AQ5TCM9 118 aa5.54□□□□□ -1.52
SLC4A4-201ENST00000264485 PKHD1L1Q86WI1 4243 aa5.52□□□□□ -1.53
SLC4A4-201ENST00000264485 MT1AP04731 61 aa5.51□□□□□ -1.53
SLC4A4-201ENST00000264485 RYR2Q92736 4967 aa5.49□□□□□ -1.53
SLC4A4-201ENST00000264485 KRTAP4-9Q9BYQ8 210 aa5.47□□□□□ -1.53
SLC4A4-201ENST00000264485 HECTD4Q9Y4D8 3996 aa5.47□□□□□ -1.53
SLC4A4-201ENST00000264485 KRTAP19-6Q3LI70 58 aa5.43□□□□□ -1.54
SLC4A4-201ENST00000264485 HERC2O95714 4834 aa5.42□□□□□ -1.54
SLC4A4-201ENST00000264485 KRTAP2-3P0C7H8 128 aa5.42□□□□□ -1.54
SLC4A4-201ENST00000264485 KRTAP2-4Q9BYR9 128 aa5.42□□□□□ -1.54
SLC4A4-201ENST00000264485 KRTAP2-1Q9BYU5 128 aa5.42□□□□□ -1.54
SLC4A4-201ENST00000264485 KRTAP19-2Q3LHN2 52 aa5.3□□□□□ -1.56
SLC4A4-201ENST00000264485 KRTAP6-2Q3LI66 62 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms