RNA–Protein interactions for RNA: ENST00000262919.9

ATRN-201, Transcript of attractin, humanhuman

APPRIS P4 TSL 5 BASIC

Gene ATRN, Length 8,633 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRN-201ENST00000262919 KRTAP19-4Q3LI73 84 aa7.65□□□□□ -1.18
ATRN-201ENST00000262919 KRTAP10-4P60372 401 aaPredicted RBP7.57□□□□□ -1.2
ATRN-201ENST00000262919 LYSTQ99698 3801 aa7.55□□□□□ -1.2
ATRN-201ENST00000262919 DNAH1Q9P2D7 4330 aa7.48□□□□□ -1.21
ATRN-201ENST00000262919 DNAH7Q8WXX0 4024 aa7.47□□□□□ -1.21
ATRN-201ENST00000262919 CMYA5Q8N3K9 4069 aa7.45□□□□□ -1.22
ATRN-201ENST00000262919 ZNF469Q96JG9 3925 aaPredicted RBP7.37□□□□□ -1.23
ATRN-201ENST00000262919 DNAH3Q8TD57 4116 aa7.37□□□□□ -1.23
ATRN-201ENST00000262919 ANK3Q12955 4377 aaKnown RBP7.37□□□□□ -1.23
ATRN-201ENST00000262919 KRTAP10-7P60409 375 aaPredicted RBP7.35□□□□□ -1.23
ATRN-201ENST00000262919 HUWE1Q7Z6Z7 4374 aaKnown RBP7.35□□□□□ -1.23
ATRN-201ENST00000262919 DNAH2Q9P225 4427 aa7.33□□□□□ -1.24
ATRN-201ENST00000262919 ANK2Q01484 3957 aa7.32□□□□□ -1.24
ATRN-201ENST00000262919 SPRR2GQ9BYE4 73 aa7.29□□□□□ -1.24
ATRN-201ENST00000262919 LORP23490 312 aaPredicted RBP7.21□□□□□ -1.25
ATRN-201ENST00000262919 HECTD4Q9Y4D8 3996 aa7.21□□□□□ -1.26
ATRN-201ENST00000262919 VPS13BQ7Z7G8 4022 aa7.19□□□□□ -1.26
ATRN-201ENST00000262919 KRTAP4-5Q9BYR2 181 aa7.18□□□□□ -1.26
ATRN-201ENST00000262919 LCE3CQ5T5A8 94 aa7.16□□□□□ -1.26
ATRN-201ENST00000262919 DNAH6Q9C0G6 4158 aa7.07□□□□□ -1.28
ATRN-201ENST00000262919 KMT2AQ03164 3969 aa7.06□□□□□ -1.28
ATRN-201ENST00000262919 MT1HP80294 61 aa7□□□□□ -1.29
ATRN-201ENST00000262919 SPRR2FQ96RM1 72 aa6.99□□□□□ -1.29
ATRN-201ENST00000262919 KRTAP19-5Q3LI72 72 aa6.96□□□□□ -1.29
ATRN-201ENST00000262919 MT2AP02795 61 aa6.89□□□□□ -1.31
ATRN-201ENST00000262919 FRAS1Q86XX4 4008 aa6.86□□□□□ -1.31
ATRN-201ENST00000262919 DNAH10Q8IVF4 4471 aa6.74□□□□□ -1.33
ATRN-201ENST00000262919 FAT2Q9NYQ8 4349 aa6.7□□□□□ -1.34
ATRN-201ENST00000262919 KRTAP4-1Q9BYQ7 146 aa6.68□□□□□ -1.34
ATRN-201ENST00000262919 KRTAP12-4P60329 112 aa6.67□□□□□ -1.34
ATRN-201ENST00000262919 FLGP20930 4061 aaPredicted RBP6.66□□□□□ -1.34
ATRN-201ENST00000262919 MT1FP04733 61 aa6.66□□□□□ -1.34
ATRN-201ENST00000262919 DNAH9Q9NYC9 4486 aa6.62□□□□□ -1.35
ATRN-201ENST00000262919 PRKDCP78527 4128 aaKnown RBP6.6□□□□□ -1.35
ATRN-201ENST00000262919 DYNC2H1Q8NCM8 4307 aaKnown RBP6.56□□□□□ -1.36
ATRN-201ENST00000262919 KRTAP19-8Q3LI54 63 aa6.55□□□□□ -1.36
ATRN-201ENST00000262919 SPRR2EP22531 72 aa6.54□□□□□ -1.36
ATRN-201ENST00000262919 SPRR2BP35325 72 aa6.54□□□□□ -1.36
ATRN-201ENST00000262919 SPRR2AP35326 72 aa6.54□□□□□ -1.36
ATRN-201ENST00000262919 DNAH11Q96DT5 4516 aa6.53□□□□□ -1.36
ATRN-201ENST00000262919 LCE3BQ5TA77 95 aa6.53□□□□□ -1.36
ATRN-201ENST00000262919 LCE2BO14633 110 aa6.48□□□□□ -1.37
ATRN-201ENST00000262919 DNAH17Q9UFH2 4485 aa6.47□□□□□ -1.37
ATRN-201ENST00000262919 VPS13DQ5THJ4 4388 aa6.42□□□□□ -1.38
ATRN-201ENST00000262919 DNAH8Q96JB1 4490 aa6.41□□□□□ -1.38
ATRN-201ENST00000262919 SPRR2DP22532 72 aa6.4□□□□□ -1.39
ATRN-201ENST00000262919 LCE3DQ9BYE3 92 aa6.39□□□□□ -1.39
ATRN-201ENST00000262919 MT1GP13640 62 aa6.38□□□□□ -1.39
ATRN-201ENST00000262919 DNAH5Q8TE73 4624 aa6.36□□□□□ -1.39
ATRN-201ENST00000262919 SPRR5A0A1B0GTR4 108 aa6.35□□□□□ -1.39
ATRN-201ENST00000262919 LCE3EQ5T5B0 92 aa6.31□□□□□ -1.4
ATRN-201ENST00000262919 KRTAP19-1Q8IUB9 90 aa6.3□□□□□ -1.4
ATRN-201ENST00000262919 LRP1Q07954 4544 aaKnown RBP6.3□□□□□ -1.4
ATRN-201ENST00000262919 MT1XP80297 61 aa6.29□□□□□ -1.4
ATRN-201ENST00000262919 STARD9Q9P2P6 4700 aa6.21□□□□□ -1.42
ATRN-201ENST00000262919 PKHD1P08F94 4074 aa6.17□□□□□ -1.42
ATRN-201ENST00000262919 PLECQ15149 4684 aaKnown RBP6.16□□□□□ -1.42
ATRN-201ENST00000262919 MT1LQ93083 61 aa6.11□□□□□ -1.43
ATRN-201ENST00000262919 MT3P25713 68 aa6.08□□□□□ -1.44
ATRN-201ENST00000262919 PKHD1L1Q86WI1 4243 aa6.08□□□□□ -1.44
ATRN-201ENST00000262919 LCE2CQ5TA81 110 aa6.02□□□□□ -1.45
ATRN-201ENST00000262919 KRTAP19-3Q7Z4W3 81 aa6.01□□□□□ -1.45
ATRN-201ENST00000262919 LRP1BQ9NZR2 4599 aa6□□□□□ -1.45
ATRN-201ENST00000262919 MT1BP07438 61 aa5.98□□□□□ -1.45
ATRN-201ENST00000262919 APOBP04114 4563 aaKnown RBP5.97□□□□□ -1.45
ATRN-201ENST00000262919 KRTAP9-8Q9BYQ0 159 aa5.96□□□□□ -1.46
ATRN-201ENST00000262919 DYNC1H1Q14204 4646 aaKnown RBP5.93□□□□□ -1.46
ATRN-201ENST00000262919 FAT1Q14517 4588 aa5.93□□□□□ -1.46
ATRN-201ENST00000262919 LCE2DQ5TA82 110 aaPredicted RBP5.84□□□□□ -1.47
ATRN-201ENST00000262919 KRTAP9-3Q9BYQ3 159 aa5.84□□□□□ -1.47
ATRN-201ENST00000262919 SACSQ9NZJ4 4579 aa5.83□□□□□ -1.48
ATRN-201ENST00000262919 PKD1P98161 4303 aa5.82□□□□□ -1.48
ATRN-201ENST00000262919 HSPG2P98160 4391 aa5.81□□□□□ -1.48
ATRN-201ENST00000262919 MT1EP04732 61 aa5.79□□□□□ -1.48
ATRN-201ENST00000262919 KRTAP4-8A0A0G2JLE6 195 aa5.76□□□□□ -1.49
ATRN-201ENST00000262919 KRTAP4-8Q9BYQ9 185 aa5.76□□□□□ -1.49
ATRN-201ENST00000262919 PRM1P04553 51 aa5.7□□□□□ -1.5
ATRN-201ENST00000262919 TNXBP22105 4242 aa5.61□□□□□ -1.51
ATRN-201ENST00000262919 MT1MQ8N339 61 aa5.6□□□□□ -1.51
ATRN-201ENST00000262919 FAT3Q8TDW7 4589 aa5.59□□□□□ -1.51
ATRN-201ENST00000262919 MYCBP2O75592 4640 aa5.54□□□□□ -1.52
ATRN-201ENST00000262919 MT4P47944 62 aa5.48□□□□□ -1.53
ATRN-201ENST00000262919 LCE1DQ5T752 114 aa5.47□□□□□ -1.53
ATRN-201ENST00000262919 KRTAP19-6Q3LI70 58 aa5.45□□□□□ -1.54
ATRN-201ENST00000262919 LCE1BQ5T7P3 118 aa5.43□□□□□ -1.54
ATRN-201ENST00000262919 RYR1P21817 5038 aa5.39□□□□□ -1.55
ATRN-201ENST00000262919 KRTAP4-7Q9BYR0 210 aa5.35□□□□□ -1.55
ATRN-201ENST00000262919 MT1AP04731 61 aa5.35□□□□□ -1.55
ATRN-201ENST00000262919 DNHD1Q96M86 4753 aa5.29□□□□□ -1.56
ATRN-201ENST00000262919 KRTAP2-3P0C7H8 128 aa5.28□□□□□ -1.56
ATRN-201ENST00000262919 KRTAP2-4Q9BYR9 128 aa5.28□□□□□ -1.56
ATRN-201ENST00000262919 KRTAP2-1Q9BYU5 128 aa5.28□□□□□ -1.56
ATRN-201ENST00000262919 RYR3Q15413 4870 aa5.23□□□□□ -1.57
ATRN-201ENST00000262919 LOC100996750A0A140TA64 210 aa5.17□□□□□ -1.58
ATRN-201ENST00000262919 KRTAP19-2Q3LHN2 52 aa5.15□□□□□ -1.58
ATRN-201ENST00000262919 LCE1AQ5T7P2 110 aa5.13□□□□□ -1.59
ATRN-201ENST00000262919 LRP2P98164 4655 aa5.13□□□□□ -1.59
ATRN-201ENST00000262919 LCE5AQ5TCM9 118 aa5.13□□□□□ -1.59
ATRN-201ENST00000262919 KRTAP9-2Q9BYQ4 174 aa5.11□□□□□ -1.59
ATRN-201ENST00000262919 KRTAP17-1Q9BYP8 105 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms