RNA–Protein interactions for RNA: ENST00000262585.6

DENND3-201, Transcript of DENN domain containing 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene DENND3, Length 5,438 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-201ENST00000262585 KRTAP3-2Q9BYR7 98 aa7.83□□□□□ -1.16
DENND3-201ENST00000262585 STARD9Q9P2P6 4700 aa7.72□□□□□ -1.17
DENND3-201ENST00000262585 VPS13DQ5THJ4 4388 aa7.72□□□□□ -1.17
DENND3-201ENST00000262585 PRO2289Q9P1D8 64 aa7.68□□□□□ -1.18
DENND3-201ENST00000262585 ALMS1Q8TCU4 4167 aa7.65□□□□□ -1.19
DENND3-201ENST00000262585 DNAH17Q9UFH2 4485 aa7.64□□□□□ -1.19
DENND3-201ENST00000262585 FAT1Q14517 4588 aa7.63□□□□□ -1.19
DENND3-201ENST00000262585 PRKDCP78527 4128 aaKnown RBP7.6□□□□□ -1.19
DENND3-201ENST00000262585 LRP1BQ9NZR2 4599 aa7.56□□□□□ -1.2
DENND3-201ENST00000262585 DYNC1H1Q14204 4646 aaKnown RBP7.55□□□□□ -1.2
DENND3-201ENST00000262585 DNAH8Q96JB1 4490 aa7.53□□□□□ -1.2
DENND3-201ENST00000262585 DNAH2Q9P225 4427 aa7.52□□□□□ -1.21
DENND3-201ENST00000262585 KMT2AQ03164 3969 aa7.5□□□□□ -1.21
DENND3-201ENST00000262585 ANK2Q01484 3957 aa7.47□□□□□ -1.21
DENND3-201ENST00000262585 LORP23490 312 aaPredicted RBP7.45□□□□□ -1.22
DENND3-201ENST00000262585 DNAH3Q8TD57 4116 aa7.41□□□□□ -1.22
DENND3-201ENST00000262585 LYSTQ99698 3801 aa7.4□□□□□ -1.22
DENND3-201ENST00000262585 RYR1P21817 5038 aa7.36□□□□□ -1.23
DENND3-201ENST00000262585 DYNC2H1Q8NCM8 4307 aaKnown RBP7.31□□□□□ -1.24
DENND3-201ENST00000262585 KRTAP15-1Q3LI76 137 aa7.31□□□□□ -1.24
DENND3-201ENST00000262585 SACSQ9NZJ4 4579 aa7.29□□□□□ -1.24
DENND3-201ENST00000262585 KRTAP4-1Q9BYQ7 146 aa7.27□□□□□ -1.24
DENND3-201ENST00000262585 VPS13BQ7Z7G8 4022 aa7.27□□□□□ -1.25
DENND3-201ENST00000262585 MYCBP2O75592 4640 aa7.27□□□□□ -1.25
DENND3-201ENST00000262585 FAT2Q9NYQ8 4349 aa7.26□□□□□ -1.25
DENND3-201ENST00000262585 CMYA5Q8N3K9 4069 aa7.25□□□□□ -1.25
DENND3-201ENST00000262585 KIAA1109Q2LD37 5005 aa7.22□□□□□ -1.25
DENND3-201ENST00000262585 FRAS1Q86XX4 4008 aa7.2□□□□□ -1.26
DENND3-201ENST00000262585 DNAH6Q9C0G6 4158 aa7.16□□□□□ -1.26
DENND3-201ENST00000262585 DNAH7Q8WXX0 4024 aa7.16□□□□□ -1.26
DENND3-201ENST00000262585 APOBP04114 4563 aaKnown RBP7.15□□□□□ -1.26
DENND3-201ENST00000262585 LRP1Q07954 4544 aaKnown RBP7.1□□□□□ -1.27
DENND3-201ENST00000262585 KRTAP10-12P60413 245 aa7.1□□□□□ -1.27
DENND3-201ENST00000262585 HECTD4Q9Y4D8 3996 aa7.09□□□□□ -1.27
DENND3-201ENST00000262585 KRTAP17-1Q9BYP8 105 aa7.09□□□□□ -1.27
DENND3-201ENST00000262585 RYR3Q15413 4870 aa7.07□□□□□ -1.28
DENND3-201ENST00000262585 FAT3Q8TDW7 4589 aa7.03□□□□□ -1.28
DENND3-201ENST00000262585 LCE3AQ5TA76 89 aa7.02□□□□□ -1.29
DENND3-201ENST00000262585 HYDINQ4G0P3 5121 aa6.98□□□□□ -1.29
DENND3-201ENST00000262585 KRTAP12-3P60328 96 aa6.96□□□□□ -1.3
DENND3-201ENST00000262585 KRTAP23-1A1A580 65 aa6.89□□□□□ -1.31
DENND3-201ENST00000262585 MT1HP80294 61 aa6.87□□□□□ -1.31
DENND3-201ENST00000262585 PKHD1P08F94 4074 aa6.86□□□□□ -1.31
DENND3-201ENST00000262585 RYR2Q92736 4967 aa6.83□□□□□ -1.32
DENND3-201ENST00000262585 MT2AP02795 61 aa6.8□□□□□ -1.32
DENND3-201ENST00000262585 LRP2P98164 4655 aa6.77□□□□□ -1.33
DENND3-201ENST00000262585 INE1O15225 51 aa6.75□□□□□ -1.33
DENND3-201ENST00000262585 SPRR2GQ9BYE4 73 aa6.74□□□□□ -1.33
DENND3-201ENST00000262585 CRCT1Q9UGL9 99 aa6.74□□□□□ -1.33
DENND3-201ENST00000262585 MT1FP04733 61 aa6.72□□□□□ -1.33
DENND3-201ENST00000262585 HERC2O95714 4834 aa6.68□□□□□ -1.34
DENND3-201ENST00000262585 HSPG2P98160 4391 aa6.64□□□□□ -1.35
DENND3-201ENST00000262585 PKD1P98161 4303 aa6.62□□□□□ -1.35
DENND3-201ENST00000262585 KMT2CQ8NEZ4 4911 aaKnown RBP6.6□□□□□ -1.35
DENND3-201ENST00000262585 KRTAP19-1Q8IUB9 90 aa6.51□□□□□ -1.37
DENND3-201ENST00000262585 LPAP08519 4548 aa6.5□□□□□ -1.37
DENND3-201ENST00000262585 KRTAP8-1Q8IUC2 63 aa6.45□□□□□ -1.38
DENND3-201ENST00000262585 KRTAP19-5Q3LI72 72 aa6.35□□□□□ -1.39
DENND3-201ENST00000262585 BIRC6Q9NR09 4857 aa6.34□□□□□ -1.4
DENND3-201ENST00000262585 LCE2CQ5TA81 110 aa6.32□□□□□ -1.4
DENND3-201ENST00000262585 KRTAP19-8Q3LI54 63 aa6.31□□□□□ -1.4
DENND3-201ENST00000262585 KRTAP10-7P60409 375 aaPredicted RBP6.3□□□□□ -1.4
DENND3-201ENST00000262585 PCLOQ9Y6V0 5065 aa6.3□□□□□ -1.4
DENND3-201ENST00000262585 TNXBP22105 4242 aa6.29□□□□□ -1.4
DENND3-201ENST00000262585 KRTAP9-8Q9BYQ0 159 aa6.27□□□□□ -1.41
DENND3-201ENST00000262585 EPPK1P58107 5090 aaKnown RBP6.27□□□□□ -1.41
DENND3-201ENST00000262585 HERC1Q15751 4861 aa6.26□□□□□ -1.41
DENND3-201ENST00000262585 PKHD1L1Q86WI1 4243 aa6.25□□□□□ -1.41
DENND3-201ENST00000262585 KRTAP10-5P60370 271 aa6.23□□□□□ -1.41
DENND3-201ENST00000262585 MT1XP80297 61 aa6.23□□□□□ -1.41
DENND3-201ENST00000262585 MT1BP07438 61 aa6.22□□□□□ -1.41
DENND3-201ENST00000262585 ABCA13Q86UQ4 5058 aa6.2□□□□□ -1.42
DENND3-201ENST00000262585 KRTAP19-2Q3LHN2 52 aa6.18□□□□□ -1.42
DENND3-201ENST00000262585 LCE3CQ5T5A8 94 aa6.18□□□□□ -1.42
DENND3-201ENST00000262585 MUC17Q685J3 4493 aa6.09□□□□□ -1.43
DENND3-201ENST00000262585 KRTAP9-3Q9BYQ3 159 aa6.07□□□□□ -1.44
DENND3-201ENST00000262585 SPRR2FQ96RM1 72 aa6.06□□□□□ -1.44
DENND3-201ENST00000262585 KRTAP4-8A0A0G2JLE6 195 aa6.03□□□□□ -1.44
DENND3-201ENST00000262585 KRTAP4-8Q9BYQ9 185 aa6.03□□□□□ -1.44
DENND3-201ENST00000262585 FLGP20930 4061 aaPredicted RBP6□□□□□ -1.45
DENND3-201ENST00000262585 SPRR5A0A1B0GTR4 108 aa5.92□□□□□ -1.46
DENND3-201ENST00000262585 LCE2BO14633 110 aa5.86□□□□□ -1.47
DENND3-201ENST00000262585 MUC2Q02817 5179 aa5.85□□□□□ -1.47
DENND3-201ENST00000262585 UBR4Q5T4S7 5183 aa5.84□□□□□ -1.47
DENND3-201ENST00000262585 RNF213Q63HN8 5207 aa5.82□□□□□ -1.48
DENND3-201ENST00000262585 FAT4Q6V0I7 4981 aa5.82□□□□□ -1.48
DENND3-201ENST00000262585 KRTAP19-4Q3LI73 84 aa5.79□□□□□ -1.48
DENND3-201ENST00000262585 FSIP2Q5CZC0 6907 aa5.78□□□□□ -1.48
DENND3-201ENST00000262585 MT1GP13640 62 aa5.74□□□□□ -1.49
DENND3-201ENST00000262585 HMCN2Q8NDA2 5059 aa5.72□□□□□ -1.49
DENND3-201ENST00000262585 KRTAP4-7Q9BYR0 210 aa5.71□□□□□ -1.5
DENND3-201ENST00000262585 LCE3BQ5TA77 95 aa5.61□□□□□ -1.51
DENND3-201ENST00000262585 SPRR2EP22531 72 aa5.57□□□□□ -1.52
DENND3-201ENST00000262585 SPRR2BP35325 72 aa5.57□□□□□ -1.52
DENND3-201ENST00000262585 SPRR2AP35326 72 aa5.57□□□□□ -1.52
DENND3-201ENST00000262585 MT1LQ93083 61 aa5.56□□□□□ -1.52
DENND3-201ENST00000262585 MT1EP04732 61 aa5.53□□□□□ -1.52
DENND3-201ENST00000262585 KRTAP12-4P60329 112 aa5.49□□□□□ -1.53
DENND3-201ENST00000262585 SYNE1Q8NF91 8797 aaKnown RBP5.47□□□□□ -1.53
DENND3-201ENST00000262585 KRTAP19-3Q7Z4W3 81 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms