RNA–Protein interactions for RNA: ENST00000262305.8

RAB11FIP3-201, Transcript of RAB11 family interacting protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RAB11FIP3, Length 4,831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-201ENST00000262305 DNHD1Q96M86 4753 aa9.65□□□□□ -0.86
RAB11FIP3-201ENST00000262305 DNAH1Q9P2D7 4330 aa9.64□□□□□ -0.87
RAB11FIP3-201ENST00000262305 DNAH11Q96DT5 4516 aa9.58□□□□□ -0.88
RAB11FIP3-201ENST00000262305 KRTAP10-12P60413 245 aa9.52□□□□□ -0.88
RAB11FIP3-201ENST00000262305 VPS13DQ5THJ4 4388 aa9.51□□□□□ -0.89
RAB11FIP3-201ENST00000262305 DNAH10Q8IVF4 4471 aa9.5□□□□□ -0.89
RAB11FIP3-201ENST00000262305 LORP23490 312 aaPredicted RBP9.48□□□□□ -0.89
RAB11FIP3-201ENST00000262305 DNAH17Q9UFH2 4485 aa9.46□□□□□ -0.9
RAB11FIP3-201ENST00000262305 DYNC1H1Q14204 4646 aaKnown RBP9.38□□□□□ -0.91
RAB11FIP3-201ENST00000262305 KRTAP23-1A1A580 65 aa9.36□□□□□ -0.91
RAB11FIP3-201ENST00000262305 KRTAP4-1Q9BYQ7 146 aa9.3□□□□□ -0.92
RAB11FIP3-201ENST00000262305 FAT1Q14517 4588 aa9.28□□□□□ -0.92
RAB11FIP3-201ENST00000262305 LRP1BQ9NZR2 4599 aa9.28□□□□□ -0.92
RAB11FIP3-201ENST00000262305 KRTAP12-3P60328 96 aa9.28□□□□□ -0.92
RAB11FIP3-201ENST00000262305 STARD9Q9P2P6 4700 aa9.27□□□□□ -0.92
RAB11FIP3-201ENST00000262305 LCE3AQ5TA76 89 aa9.2□□□□□ -0.94
RAB11FIP3-201ENST00000262305 DNAH2Q9P225 4427 aa9.17□□□□□ -0.94
RAB11FIP3-201ENST00000262305 RYR1P21817 5038 aa9.17□□□□□ -0.94
RAB11FIP3-201ENST00000262305 DYNC2H1Q8NCM8 4307 aaKnown RBP9.09□□□□□ -0.95
RAB11FIP3-201ENST00000262305 SACSQ9NZJ4 4579 aa9.07□□□□□ -0.96
RAB11FIP3-201ENST00000262305 PRKDCP78527 4128 aaKnown RBP9.07□□□□□ -0.96
RAB11FIP3-201ENST00000262305 MT1HP80294 61 aa9.04□□□□□ -0.96
RAB11FIP3-201ENST00000262305 FAT2Q9NYQ8 4349 aa9.04□□□□□ -0.96
RAB11FIP3-201ENST00000262305 DNAH8Q96JB1 4490 aa9.01□□□□□ -0.97
RAB11FIP3-201ENST00000262305 DNAH3Q8TD57 4116 aa9□□□□□ -0.97
RAB11FIP3-201ENST00000262305 INE1O15225 51 aa8.96□□□□□ -0.97
RAB11FIP3-201ENST00000262305 MT2AP02795 61 aa8.94□□□□□ -0.98
RAB11FIP3-201ENST00000262305 CRCT1Q9UGL9 99 aa8.93□□□□□ -0.98
RAB11FIP3-201ENST00000262305 SPRR2GQ9BYE4 73 aa8.92□□□□□ -0.98
RAB11FIP3-201ENST00000262305 ANK2Q01484 3957 aa8.91□□□□□ -0.98
RAB11FIP3-201ENST00000262305 KIAA1109Q2LD37 5005 aa8.88□□□□□ -0.99
RAB11FIP3-201ENST00000262305 APOBP04114 4563 aaKnown RBP8.84□□□□□ -0.99
RAB11FIP3-201ENST00000262305 KMT2AQ03164 3969 aa8.81□□□□□ -1
RAB11FIP3-201ENST00000262305 KRTAP8-1Q8IUC2 63 aa8.76□□□□□ -1.01
RAB11FIP3-201ENST00000262305 MT1FP04733 61 aa8.76□□□□□ -1.01
RAB11FIP3-201ENST00000262305 KRTAP17-1Q9BYP8 105 aa8.74□□□□□ -1.01
RAB11FIP3-201ENST00000262305 RYR3Q15413 4870 aa8.71□□□□□ -1.01
RAB11FIP3-201ENST00000262305 VPS13BQ7Z7G8 4022 aa8.69□□□□□ -1.02
RAB11FIP3-201ENST00000262305 MYCBP2O75592 4640 aa8.66□□□□□ -1.02
RAB11FIP3-201ENST00000262305 LYSTQ99698 3801 aa8.64□□□□□ -1.03
RAB11FIP3-201ENST00000262305 RYR2Q92736 4967 aa8.57□□□□□ -1.04
RAB11FIP3-201ENST00000262305 DNAH6Q9C0G6 4158 aa8.51□□□□□ -1.05
RAB11FIP3-201ENST00000262305 LRP1Q07954 4544 aaKnown RBP8.5□□□□□ -1.05
RAB11FIP3-201ENST00000262305 FAT3Q8TDW7 4589 aa8.43□□□□□ -1.06
RAB11FIP3-201ENST00000262305 CMYA5Q8N3K9 4069 aa8.42□□□□□ -1.06
RAB11FIP3-201ENST00000262305 KRTAP19-1Q8IUB9 90 aa8.4□□□□□ -1.06
RAB11FIP3-201ENST00000262305 KRTAP19-8Q3LI54 63 aa8.36□□□□□ -1.07
RAB11FIP3-201ENST00000262305 KRTAP19-5Q3LI72 72 aa8.33□□□□□ -1.08
RAB11FIP3-201ENST00000262305 DNAH7Q8WXX0 4024 aa8.33□□□□□ -1.08
RAB11FIP3-201ENST00000262305 KRTAP10-5P60370 271 aa8.32□□□□□ -1.08
RAB11FIP3-201ENST00000262305 HECTD4Q9Y4D8 3996 aa8.3□□□□□ -1.08
RAB11FIP3-201ENST00000262305 HERC2O95714 4834 aa8.3□□□□□ -1.08
RAB11FIP3-201ENST00000262305 FRAS1Q86XX4 4008 aa8.26□□□□□ -1.09
RAB11FIP3-201ENST00000262305 HYDINQ4G0P3 5121 aa8.18□□□□□ -1.1
RAB11FIP3-201ENST00000262305 LCE3CQ5T5A8 94 aa8.17□□□□□ -1.1
RAB11FIP3-201ENST00000262305 SPRR2FQ96RM1 72 aa8.16□□□□□ -1.1
RAB11FIP3-201ENST00000262305 KRTAP19-4Q3LI73 84 aa8.16□□□□□ -1.1
RAB11FIP3-201ENST00000262305 BIRC6Q9NR09 4857 aa8.15□□□□□ -1.11
RAB11FIP3-201ENST00000262305 LRP2P98164 4655 aa8.13□□□□□ -1.11
RAB11FIP3-201ENST00000262305 KRTAP10-7P60409 375 aaPredicted RBP8.13□□□□□ -1.11
RAB11FIP3-201ENST00000262305 KRTAP9-8Q9BYQ0 159 aa8.13□□□□□ -1.11
RAB11FIP3-201ENST00000262305 LCE2CQ5TA81 110 aa8.1□□□□□ -1.11
RAB11FIP3-201ENST00000262305 HSPG2P98160 4391 aa8.09□□□□□ -1.11
RAB11FIP3-201ENST00000262305 MT1BP07438 61 aa8.08□□□□□ -1.12
RAB11FIP3-201ENST00000262305 MT1XP80297 61 aa8.08□□□□□ -1.12
RAB11FIP3-201ENST00000262305 PKD1P98161 4303 aa8.01□□□□□ -1.13
RAB11FIP3-201ENST00000262305 PKHD1P08F94 4074 aa7.98□□□□□ -1.13
RAB11FIP3-201ENST00000262305 HERC1Q15751 4861 aa7.96□□□□□ -1.14
RAB11FIP3-201ENST00000262305 PCLOQ9Y6V0 5065 aa7.96□□□□□ -1.14
RAB11FIP3-201ENST00000262305 KRTAP9-3Q9BYQ3 159 aa7.92□□□□□ -1.14
RAB11FIP3-201ENST00000262305 KRTAP19-2Q3LHN2 52 aa7.83□□□□□ -1.16
RAB11FIP3-201ENST00000262305 KMT2CQ8NEZ4 4911 aaKnown RBP7.75□□□□□ -1.17
RAB11FIP3-201ENST00000262305 LPAP08519 4548 aa7.69□□□□□ -1.18
RAB11FIP3-201ENST00000262305 KRTAP4-8A0A0G2JLE6 195 aa7.69□□□□□ -1.18
RAB11FIP3-201ENST00000262305 KRTAP4-8Q9BYQ9 185 aa7.69□□□□□ -1.18
RAB11FIP3-201ENST00000262305 PKHD1L1Q86WI1 4243 aa7.69□□□□□ -1.18
RAB11FIP3-201ENST00000262305 SPRR5A0A1B0GTR4 108 aa7.63□□□□□ -1.19
RAB11FIP3-201ENST00000262305 MUC17Q685J3 4493 aa7.6□□□□□ -1.19
RAB11FIP3-201ENST00000262305 SPRR2EP22531 72 aa7.59□□□□□ -1.19
RAB11FIP3-201ENST00000262305 SPRR2BP35325 72 aa7.59□□□□□ -1.19
RAB11FIP3-201ENST00000262305 SPRR2AP35326 72 aa7.59□□□□□ -1.19
RAB11FIP3-201ENST00000262305 TNXBP22105 4242 aa7.55□□□□□ -1.2
RAB11FIP3-201ENST00000262305 MT1GP13640 62 aa7.55□□□□□ -1.2
RAB11FIP3-201ENST00000262305 LCE2BO14633 110 aa7.55□□□□□ -1.2
RAB11FIP3-201ENST00000262305 ABCA13Q86UQ4 5058 aa7.54□□□□□ -1.2
RAB11FIP3-201ENST00000262305 EPPK1P58107 5090 aaKnown RBP7.47□□□□□ -1.21
RAB11FIP3-201ENST00000262305 FLGP20930 4061 aaPredicted RBP7.43□□□□□ -1.22
RAB11FIP3-201ENST00000262305 LCE3BQ5TA77 95 aa7.39□□□□□ -1.23
RAB11FIP3-201ENST00000262305 SPRR2DP22532 72 aa7.34□□□□□ -1.23
RAB11FIP3-201ENST00000262305 KRTAP19-3Q7Z4W3 81 aa7.3□□□□□ -1.24
RAB11FIP3-201ENST00000262305 MT1LQ93083 61 aa7.29□□□□□ -1.24
RAB11FIP3-201ENST00000262305 MT1EP04732 61 aa7.26□□□□□ -1.25
RAB11FIP3-201ENST00000262305 KRTAP12-4P60329 112 aa7.22□□□□□ -1.25
RAB11FIP3-201ENST00000262305 KRTAP4-7Q9BYR0 210 aa7.18□□□□□ -1.26
RAB11FIP3-201ENST00000262305 FAT4Q6V0I7 4981 aa7.18□□□□□ -1.26
RAB11FIP3-201ENST00000262305 KRTAP19-6Q3LI70 58 aa7.17□□□□□ -1.26
RAB11FIP3-201ENST00000262305 RNF213Q63HN8 5207 aa7.17□□□□□ -1.26
RAB11FIP3-201ENST00000262305 UBR4Q5T4S7 5183 aa7.16□□□□□ -1.26
RAB11FIP3-201ENST00000262305 LCE2AQ5TA79 106 aaPredicted RBP7.13□□□□□ -1.27
RAB11FIP3-201ENST00000262305 LCE3DQ9BYE3 92 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms