RNA–Protein interactions for RNA: ENST00000262215.7

ARFGEF1-201, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFGEF1, Length 7,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-201ENST00000262215 CSMD3Q7Z407 3707 aa5.04□□□□□ -1.6
ARFGEF1-201ENST00000262215 TRRAPQ9Y4A5 3859 aa5.03□□□□□ -1.6
ARFGEF1-201ENST00000262215 KRTAP23-1A1A580 65 aa5.02□□□□□ -1.61
ARFGEF1-201ENST00000262215 KRTAP10-4P60372 401 aaPredicted RBP4.96□□□□□ -1.62
ARFGEF1-201ENST00000262215 SPRR2FQ96RM1 72 aa4.91□□□□□ -1.62
ARFGEF1-201ENST00000262215 KRTAP10-7P60409 375 aaPredicted RBP4.88□□□□□ -1.63
ARFGEF1-201ENST00000262215 HUWE1Q7Z6Z7 4374 aaKnown RBP4.87□□□□□ -1.63
ARFGEF1-201ENST00000262215 CMYA5Q8N3K9 4069 aa4.84□□□□□ -1.63
ARFGEF1-201ENST00000262215 KRTAP19-5Q3LI72 72 aa4.83□□□□□ -1.64
ARFGEF1-201ENST00000262215 ANK2Q01484 3957 aa4.79□□□□□ -1.64
ARFGEF1-201ENST00000262215 KRTAP4-1Q9BYQ7 146 aa4.78□□□□□ -1.64
ARFGEF1-201ENST00000262215 MT1HP80294 61 aa4.76□□□□□ -1.65
ARFGEF1-201ENST00000262215 LCE3CQ5T5A8 94 aa4.71□□□□□ -1.66
ARFGEF1-201ENST00000262215 LCE3BQ5TA77 95 aa4.7□□□□□ -1.66
ARFGEF1-201ENST00000262215 FAT1Q14517 4588 aa4.7□□□□□ -1.66
ARFGEF1-201ENST00000262215 DNAH5Q8TE73 4624 aa4.7□□□□□ -1.66
ARFGEF1-201ENST00000262215 MT2AP02795 61 aa4.7□□□□□ -1.66
ARFGEF1-201ENST00000262215 DNAH11Q96DT5 4516 aa4.67□□□□□ -1.66
ARFGEF1-201ENST00000262215 DNAH10Q8IVF4 4471 aa4.66□□□□□ -1.66
ARFGEF1-201ENST00000262215 LYSTQ99698 3801 aa4.65□□□□□ -1.66
ARFGEF1-201ENST00000262215 ALMS1Q8TCU4 4167 aa4.63□□□□□ -1.67
ARFGEF1-201ENST00000262215 MT1FP04733 61 aa4.62□□□□□ -1.67
ARFGEF1-201ENST00000262215 SPRR2EP22531 72 aa4.59□□□□□ -1.68
ARFGEF1-201ENST00000262215 SPRR2BP35325 72 aa4.59□□□□□ -1.68
ARFGEF1-201ENST00000262215 SPRR2AP35326 72 aa4.59□□□□□ -1.68
ARFGEF1-201ENST00000262215 PLECQ15149 4684 aaKnown RBP4.57□□□□□ -1.68
ARFGEF1-201ENST00000262215 SPRR2GQ9BYE4 73 aa4.57□□□□□ -1.68
ARFGEF1-201ENST00000262215 DNAH8Q96JB1 4490 aa4.56□□□□□ -1.68
ARFGEF1-201ENST00000262215 DNAH1Q9P2D7 4330 aa4.55□□□□□ -1.68
ARFGEF1-201ENST00000262215 DNAH3Q8TD57 4116 aa4.55□□□□□ -1.68
ARFGEF1-201ENST00000262215 KRTAP12-4P60329 112 aa4.52□□□□□ -1.69
ARFGEF1-201ENST00000262215 MT1GP13640 62 aa4.52□□□□□ -1.69
ARFGEF1-201ENST00000262215 DNAH2Q9P225 4427 aa4.51□□□□□ -1.69
ARFGEF1-201ENST00000262215 DNAH7Q8WXX0 4024 aa4.51□□□□□ -1.69
ARFGEF1-201ENST00000262215 FRAS1Q86XX4 4008 aa4.49□□□□□ -1.69
ARFGEF1-201ENST00000262215 DNAH9Q9NYC9 4486 aa4.48□□□□□ -1.69
ARFGEF1-201ENST00000262215 DNAH17Q9UFH2 4485 aa4.44□□□□□ -1.7
ARFGEF1-201ENST00000262215 SPRR2DP22532 72 aa4.41□□□□□ -1.7
ARFGEF1-201ENST00000262215 KMT2AQ03164 3969 aa4.41□□□□□ -1.7
ARFGEF1-201ENST00000262215 DYNC1H1Q14204 4646 aaKnown RBP4.41□□□□□ -1.7
ARFGEF1-201ENST00000262215 SACSQ9NZJ4 4579 aa4.38□□□□□ -1.71
ARFGEF1-201ENST00000262215 APOBP04114 4563 aaKnown RBP4.36□□□□□ -1.71
ARFGEF1-201ENST00000262215 LRP1BQ9NZR2 4599 aa4.35□□□□□ -1.71
ARFGEF1-201ENST00000262215 RYR1P21817 5038 aa4.35□□□□□ -1.71
ARFGEF1-201ENST00000262215 LCE2BO14633 110 aa4.34□□□□□ -1.71
ARFGEF1-201ENST00000262215 DYNC2H1Q8NCM8 4307 aaKnown RBP4.34□□□□□ -1.72
ARFGEF1-201ENST00000262215 HECTD4Q9Y4D8 3996 aa4.33□□□□□ -1.72
ARFGEF1-201ENST00000262215 KRTAP4-8A0A0G2JLE6 195 aa4.3□□□□□ -1.72
ARFGEF1-201ENST00000262215 KRTAP4-8Q9BYQ9 185 aa4.3□□□□□ -1.72
ARFGEF1-201ENST00000262215 LCE3DQ9BYE3 92 aa4.3□□□□□ -1.72
ARFGEF1-201ENST00000262215 PRKDCP78527 4128 aaKnown RBP4.3□□□□□ -1.72
ARFGEF1-201ENST00000262215 VPS13DQ5THJ4 4388 aa4.29□□□□□ -1.72
ARFGEF1-201ENST00000262215 SPRR5A0A1B0GTR4 108 aa4.28□□□□□ -1.72
ARFGEF1-201ENST00000262215 STARD9Q9P2P6 4700 aa4.28□□□□□ -1.72
ARFGEF1-201ENST00000262215 MYCBP2O75592 4640 aa4.25□□□□□ -1.73
ARFGEF1-201ENST00000262215 VPS13BQ7Z7G8 4022 aa4.25□□□□□ -1.73
ARFGEF1-201ENST00000262215 DNAH6Q9C0G6 4158 aa4.24□□□□□ -1.73
ARFGEF1-201ENST00000262215 DNHD1Q96M86 4753 aa4.21□□□□□ -1.74
ARFGEF1-201ENST00000262215 KRTAP19-1Q8IUB9 90 aa4.21□□□□□ -1.74
ARFGEF1-201ENST00000262215 MT1XP80297 61 aa4.2□□□□□ -1.74
ARFGEF1-201ENST00000262215 LCE3EQ5T5B0 92 aa4.19□□□□□ -1.74
ARFGEF1-201ENST00000262215 FAT2Q9NYQ8 4349 aa4.17□□□□□ -1.74
ARFGEF1-201ENST00000262215 FAT3Q8TDW7 4589 aa4.16□□□□□ -1.74
ARFGEF1-201ENST00000262215 KRTAP4-7Q9BYR0 210 aa4.15□□□□□ -1.75
ARFGEF1-201ENST00000262215 LCE2CQ5TA81 110 aa4.12□□□□□ -1.75
ARFGEF1-201ENST00000262215 KRTAP19-4Q3LI73 84 aa4.12□□□□□ -1.75
ARFGEF1-201ENST00000262215 KRTAP19-8Q3LI54 63 aa4.1□□□□□ -1.75
ARFGEF1-201ENST00000262215 LCE2DQ5TA82 110 aaPredicted RBP4.09□□□□□ -1.75
ARFGEF1-201ENST00000262215 MT4P47944 62 aa4.08□□□□□ -1.76
ARFGEF1-201ENST00000262215 MT1BP07438 61 aa4.07□□□□□ -1.76
ARFGEF1-201ENST00000262215 LCE1BQ5T7P3 118 aa4.05□□□□□ -1.76
ARFGEF1-201ENST00000262215 RYR3Q15413 4870 aa4.04□□□□□ -1.76
ARFGEF1-201ENST00000262215 PRM1P04553 51 aa4.04□□□□□ -1.76
ARFGEF1-201ENST00000262215 PKD1P98161 4303 aa4.03□□□□□ -1.76
ARFGEF1-201ENST00000262215 LRP1Q07954 4544 aaKnown RBP4□□□□□ -1.77
ARFGEF1-201ENST00000262215 KRTAP17-1Q9BYP8 105 aa4□□□□□ -1.77
ARFGEF1-201ENST00000262215 HYDINQ4G0P3 5121 aa3.97□□□□□ -1.77
ARFGEF1-201ENST00000262215 LCE1DQ5T752 114 aa3.97□□□□□ -1.77
ARFGEF1-201ENST00000262215 KIAA1109Q2LD37 5005 aa3.96□□□□□ -1.77
ARFGEF1-201ENST00000262215 PKHD1P08F94 4074 aa3.96□□□□□ -1.78
ARFGEF1-201ENST00000262215 KRTAP9-8Q9BYQ0 159 aa3.95□□□□□ -1.78
ARFGEF1-201ENST00000262215 LOC100996750A0A140TA64 210 aa3.94□□□□□ -1.78
ARFGEF1-201ENST00000262215 KRTAP19-3Q7Z4W3 81 aa3.93□□□□□ -1.78
ARFGEF1-201ENST00000262215 KRTAP9-3Q9BYQ3 159 aa3.87□□□□□ -1.79
ARFGEF1-201ENST00000262215 MT1LQ93083 61 aa3.87□□□□□ -1.79
ARFGEF1-201ENST00000262215 PKHD1L1Q86WI1 4243 aa3.86□□□□□ -1.79
ARFGEF1-201ENST00000262215 KRTAP4-3Q9BYR4 195 aa3.86□□□□□ -1.79
ARFGEF1-201ENST00000262215 LRP2P98164 4655 aa3.84□□□□□ -1.79
ARFGEF1-201ENST00000262215 MT3P25713 68 aa3.84□□□□□ -1.8
ARFGEF1-201ENST00000262215 RYR2Q92736 4967 aa3.82□□□□□ -1.8
ARFGEF1-201ENST00000262215 TNXBP22105 4242 aa3.81□□□□□ -1.8
ARFGEF1-201ENST00000262215 HERC1Q15751 4861 aa3.8□□□□□ -1.8
ARFGEF1-201ENST00000262215 MT1EP04732 61 aa3.8□□□□□ -1.8
ARFGEF1-201ENST00000262215 KRTAP4-9Q9BYQ8 210 aa3.78□□□□□ -1.8
ARFGEF1-201ENST00000262215 HSPG2P98160 4391 aa3.77□□□□□ -1.81
ARFGEF1-201ENST00000262215 LPAP08519 4548 aa3.77□□□□□ -1.81
ARFGEF1-201ENST00000262215 LCE5AQ5TCM9 118 aa3.76□□□□□ -1.81
ARFGEF1-201ENST00000262215 HERC2O95714 4834 aa3.75□□□□□ -1.81
ARFGEF1-201ENST00000262215 MT1MQ8N339 61 aa3.74□□□□□ -1.81
ARFGEF1-201ENST00000262215 KMT2CQ8NEZ4 4911 aaKnown RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms