RNA–Protein interactions for RNA: ENST00000261644.8

CDRT1-201, CMT1A duplicated region transcript 1, humanhuman

TSL 5

Gene CDRT1, Length 902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-201ENST00000261644 Q6ZSA8 131 aa2.06□□□□□ -2.08
CDRT1-201ENST00000261644 ATRQ13535 2644 aa2.06□□□□□ -2.08
CDRT1-201ENST00000261644 TENM3Q9P273 2699 aa2.06□□□□□ -2.08
CDRT1-201ENST00000261644 DNAH6Q9C0G6 4158 aa2.04□□□□□ -2.08
CDRT1-201ENST00000261644 FASNP49327 2511 aaKnown RBP2.04□□□□□ -2.08
CDRT1-201ENST00000261644 KRTAP13-2Q52LG2 175 aa2.04□□□□□ -2.08
CDRT1-201ENST00000261644 C20orf166-AS1Q96NR2 134 aa2.04□□□□□ -2.08
CDRT1-201ENST00000261644 LYSTQ99698 3801 aa2.03□□□□□ -2.08
CDRT1-201ENST00000261644 PKD1L1Q8TDX9 2849 aa2.03□□□□□ -2.08
CDRT1-201ENST00000261644 KRTAP25-1Q3LHN0 102 aa2.03□□□□□ -2.08
CDRT1-201ENST00000261644 C1orf134Q5TEV5 83 aa2.03□□□□□ -2.08
CDRT1-201ENST00000261644 SPINT4Q6UDR6 99 aa2.03□□□□□ -2.08
CDRT1-201ENST00000261644 SPINK6Q6UWN8 80 aa2.03□□□□□ -2.08
CDRT1-201ENST00000261644 COX6B2Q6YFQ2 88 aa2.03□□□□□ -2.08
CDRT1-201ENST00000261644 TENM1Q9UKZ4 2725 aa2.03□□□□□ -2.09
CDRT1-201ENST00000261644 DNAH2Q9P225 4427 aa2.03□□□□□ -2.09
CDRT1-201ENST00000261644 PRKDCP78527 4128 aaKnown RBP2.02□□□□□ -2.09
CDRT1-201ENST00000261644 HELZ2Q9BYK8 2649 aaKnown RBP2.02□□□□□ -2.09
CDRT1-201ENST00000261644 CSAG1Q6PB30 78 aa2.02□□□□□ -2.09
CDRT1-201ENST00000261644 LINC00304Q8N9R0 145 aa2.02□□□□□ -2.09
CDRT1-201ENST00000261644 TENM4Q6N022 2769 aa2.02□□□□□ -2.09
CDRT1-201ENST00000261644 A0A1B0GU33 70 aa2.01□□□□□ -2.09
CDRT1-201ENST00000261644 H0YAA0 97 aa2.01□□□□□ -2.09
CDRT1-201ENST00000261644 ROMO1P60602 79 aa2.01□□□□□ -2.09
CDRT1-201ENST00000261644 OTOGQ6ZRI0 2925 aa2.01□□□□□ -2.09
CDRT1-201ENST00000261644 MAST4O15021 2626 aa2□□□□□ -2.09
CDRT1-201ENST00000261644 H1FX-AS1Q4G0G2 97 aa2□□□□□ -2.09
CDRT1-201ENST00000261644 DNAH11Q96DT5 4516 aa2□□□□□ -2.09
CDRT1-201ENST00000261644 PLECQ15149 4684 aaKnown RBP2□□□□□ -2.09
CDRT1-201ENST00000261644 FLNBO75369 2602 aaKnown RBP2□□□□□ -2.09
CDRT1-201ENST00000261644 SACSQ9NZJ4 4579 aa2□□□□□ -2.09
CDRT1-201ENST00000261644 DNAH7Q8WXX0 4024 aa1.99□□□□□ -2.09
CDRT1-201ENST00000261644 FRAS1Q86XX4 4008 aa1.99□□□□□ -2.09
CDRT1-201ENST00000261644 HECTD4Q9Y4D8 3996 aa1.98□□□□□ -2.09
CDRT1-201ENST00000261644 SRRM2Q9UQ35 2752 aaKnown RBP1.97□□□□□ -2.09
CDRT1-201ENST00000261644 HECTD1Q9ULT8 2610 aa1.97□□□□□ -2.09
CDRT1-201ENST00000261644 PKHD1L1Q86WI1 4243 aa1.96□□□□□ -2.1
CDRT1-201ENST00000261644 RPL37P61927 97 aaKnown RBP1.95□□□□□ -2.1
CDRT1-201ENST00000261644 DNAH5Q8TE73 4624 aa1.95□□□□□ -2.1
CDRT1-201ENST00000261644 STAB2Q8WWQ8 2551 aa1.94□□□□□ -2.1
CDRT1-201ENST00000261644 R4GN34 69 aa1.94□□□□□ -2.1
CDRT1-201ENST00000261644 KMT2AQ03164 3969 aa1.94□□□□□ -2.1
CDRT1-201ENST00000261644 STAB1Q9NY15 2570 aa1.94□□□□□ -2.1
CDRT1-201ENST00000261644 CSMD3Q7Z407 3707 aa1.93□□□□□ -2.1
CDRT1-201ENST00000261644 LRP1BQ9NZR2 4599 aa1.93□□□□□ -2.1
CDRT1-201ENST00000261644 FBN1P35555 2871 aaKnown RBP1.93□□□□□ -2.1
CDRT1-201ENST00000261644 NOTCH1P46531 2555 aa1.93□□□□□ -2.1
CDRT1-201ENST00000261644 BAHCC1Q9P281 2608 aa1.92□□□□□ -2.1
CDRT1-201ENST00000261644 NBEAL1Q6ZS30 2694 aa1.92□□□□□ -2.1
CDRT1-201ENST00000261644 VPS13BQ7Z7G8 4022 aa1.91□□□□□ -2.1
CDRT1-201ENST00000261644 STARD9Q9P2P6 4700 aa1.91□□□□□ -2.1
CDRT1-201ENST00000261644 FAT2Q9NYQ8 4349 aa1.9□□□□□ -2.11
CDRT1-201ENST00000261644 P0C880 135 aa1.9□□□□□ -2.11
CDRT1-201ENST00000261644 KRTAP10-4P60372 401 aaPredicted RBP1.9□□□□□ -2.11
CDRT1-201ENST00000261644 MGAM2Q2M2H8 2515 aa1.9□□□□□ -2.11
CDRT1-201ENST00000261644 COL6A5A8TX70 2615 aa1.89□□□□□ -2.11
CDRT1-201ENST00000261644 M0QZ58 72 aa1.89□□□□□ -2.11
CDRT1-201ENST00000261644 PKD1P98161 4303 aa1.88□□□□□ -2.11
CDRT1-201ENST00000261644 TPRXLQ17RH7 258 aa1.87□□□□□ -2.11
CDRT1-201ENST00000261644 PP632Q6XCG6 107 aa1.87□□□□□ -2.11
CDRT1-201ENST00000261644 COL7A1Q02388 2944 aa1.86□□□□□ -2.11
CDRT1-201ENST00000261644 KRTAP21-3Q3LHN1 58 aa1.86□□□□□ -2.11
CDRT1-201ENST00000261644 CRIPTQ9P021 101 aa1.86□□□□□ -2.11
CDRT1-201ENST00000261644 PRO2289Q9P1D8 64 aa1.86□□□□□ -2.11
CDRT1-201ENST00000261644 TGP01266 2768 aa1.86□□□□□ -2.11
CDRT1-201ENST00000261644 PKHD1P08F94 4074 aa1.86□□□□□ -2.11
CDRT1-201ENST00000261644 KRTAP13-4Q3LI77 160 aa1.85□□□□□ -2.11
CDRT1-201ENST00000261644 LCE3DQ9BYE3 92 aa1.85□□□□□ -2.11
CDRT1-201ENST00000261644 S4R3F8 94 aa1.85□□□□□ -2.11
CDRT1-201ENST00000261644 APOBP04114 4563 aaKnown RBP1.84□□□□□ -2.11
CDRT1-201ENST00000261644 FBN3Q75N90 2809 aa1.84□□□□□ -2.11
CDRT1-201ENST00000261644 TNXBP22105 4242 aa1.84□□□□□ -2.12
CDRT1-201ENST00000261644 MEGF8Q7Z7M0 2845 aa1.84□□□□□ -2.12
CDRT1-201ENST00000261644 KRTAP12-1P59990 96 aa1.83□□□□□ -2.12
CDRT1-201ENST00000261644 C9orf92A6NGG3 77 aa1.82□□□□□ -2.12
CDRT1-201ENST00000261644 KRTAP5-7Q6L8G8 165 aa1.82□□□□□ -2.12
CDRT1-201ENST00000261644 FLG2Q5D862 2391 aaPredicted RBP1.82□□□□□ -2.12
CDRT1-201ENST00000261644 MUC19Q7Z5P9 8384 aa1.82□□□□□ -2.12
CDRT1-201ENST00000261644 LRP1Q07954 4544 aaKnown RBP1.82□□□□□ -2.12
CDRT1-201ENST00000261644 HSPG2P98160 4391 aa1.81□□□□□ -2.12
CDRT1-201ENST00000261644 FAT3Q8TDW7 4589 aa1.79□□□□□ -2.12
CDRT1-201ENST00000261644 DYNC1H1Q14204 4646 aaKnown RBP1.78□□□□□ -2.12
CDRT1-201ENST00000261644 FAT1Q14517 4588 aa1.78□□□□□ -2.12
CDRT1-201ENST00000261644 DMBT1Q9UGM3 2413 aaPredicted RBP1.76□□□□□ -2.13
CDRT1-201ENST00000261644 A0A0D9SG42 100 aa1.76□□□□□ -2.13
CDRT1-201ENST00000261644 C10orf95Q9H7T3 257 aa1.75□□□□□ -2.13
CDRT1-201ENST00000261644 SMR3BP02814 79 aaPredicted RBP1.74□□□□□ -2.13
CDRT1-201ENST00000261644 PLAC4Q8WY50 150 aa1.74□□□□□ -2.13
CDRT1-201ENST00000261644 HYDINQ4G0P3 5121 aa1.74□□□□□ -2.13
CDRT1-201ENST00000261644 DNHD1Q96M86 4753 aa1.73□□□□□ -2.13
CDRT1-201ENST00000261644 SPRR5A0A1B0GTR4 108 aa1.72□□□□□ -2.13
CDRT1-201ENST00000261644 MT1HL1P0DM35 61 aa1.72□□□□□ -2.13
CDRT1-201ENST00000261644 MYCBP2O75592 4640 aa1.7□□□□□ -2.14
CDRT1-201ENST00000261644 INE1O15225 51 aa1.69□□□□□ -2.14
CDRT1-201ENST00000261644 KRTAP10-10P60014 251 aa1.68□□□□□ -2.14
CDRT1-201ENST00000261644 Q5VSD8 79 aa1.68□□□□□ -2.14
CDRT1-201ENST00000261644 KRTAP19-2Q3LHN2 52 aa1.67□□□□□ -2.14
CDRT1-201ENST00000261644 MUC17Q685J3 4493 aa1.64□□□□□ -2.15
CDRT1-201ENST00000261644 TNP1P09430 55 aa1.63□□□□□ -2.15
CDRT1-201ENST00000261644 RYR2Q92736 4967 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms